RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 PCDHB7Q9Y5E2 793 aa17.71■□□□□ 0.43
GARNL3-215ENST00000478702 TBKBP1A7MCY6 615 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 C9IYK1 514 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 EML1O00423 815 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 FSCN2O14926 492 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 RPS6KA5O75582 802 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 UBE3AQ05086 875 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 SPIRE1Q08AE8 756 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 TCF15Q12870 199 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 KCNC3Q14003 757 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 DUSP6Q16828 381 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 SLFN12Q8IYM2 578 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 LINC01465Q8N7H1 131 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 TMX3Q96JJ7 454 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 ADAM2Q99965 735 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 CWH43Q9H720 699 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 TLR9Q9NR96 1032 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 ST3GAL5Q9UNP4 418 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 PCDHB12Q9Y5F1 795 aa17.7■□□□□ 0.42
GARNL3-215ENST00000478702 NEMFO60524 1076 aa17.69■□□□□ 0.42
GARNL3-215ENST00000478702 FGF18O76093 207 aa17.69■□□□□ 0.42
GARNL3-215ENST00000478702 ATF7P17544 494 aaPredicted RBP17.69■□□□□ 0.42
GARNL3-215ENST00000478702 MCM2P49736 904 aa17.69■□□□□ 0.42
GARNL3-215ENST00000478702 SPOUT1Q5T280 376 aaKnown RBP17.69■□□□□ 0.42
GARNL3-215ENST00000478702 TRMT1LQ7Z2T5 733 aaKnown RBP17.69■□□□□ 0.42
GARNL3-215ENST00000478702 COLGALT1Q8NBJ5 622 aa17.69■□□□□ 0.42
GARNL3-215ENST00000478702 MICAL1Q8TDZ2 1067 aa17.69■□□□□ 0.42
GARNL3-215ENST00000478702 RPGRIP1Q96KN7 1286 aa17.69■□□□□ 0.42
GARNL3-215ENST00000478702 BACH2Q9BYV9 841 aa17.69■□□□□ 0.42
GARNL3-215ENST00000478702 FOXP1Q9H334 677 aaPredicted RBP17.69■□□□□ 0.42
GARNL3-215ENST00000478702 TYW1Q9NV66 732 aaKnown RBP17.69■□□□□ 0.42
GARNL3-215ENST00000478702 CACNA1HO95180 2353 aa17.69■□□□□ 0.42
GARNL3-215ENST00000478702 MAGEB2O15479 319 aa17.68■□□□□ 0.42
GARNL3-215ENST00000478702 STBD1O95210 358 aa17.68■□□□□ 0.42
GARNL3-215ENST00000478702 SIGLEC14Q08ET2 396 aa17.68■□□□□ 0.42
GARNL3-215ENST00000478702 TARBP2Q15633 366 aaKnown RBP17.68■□□□□ 0.42
GARNL3-215ENST00000478702 XKR3Q5GH77 459 aa17.68■□□□□ 0.42
GARNL3-215ENST00000478702 SLC24A5Q71RS6 500 aa17.68■□□□□ 0.42
GARNL3-215ENST00000478702 FAM228AQ86W67 206 aa17.68■□□□□ 0.42
GARNL3-215ENST00000478702 FBXL6Q8N531 539 aa17.68■□□□□ 0.42
GARNL3-215ENST00000478702 ASIC4Q96FT7 647 aa17.68■□□□□ 0.42
GARNL3-215ENST00000478702 PPP1R16BQ96T49 567 aa17.68■□□□□ 0.42
GARNL3-215ENST00000478702 S1PR5Q9H228 398 aa17.68■□□□□ 0.42
GARNL3-215ENST00000478702 C1orf112Q9NSG2 853 aa17.68■□□□□ 0.42
GARNL3-215ENST00000478702 NRBP2Q9NSY0 501 aa17.68■□□□□ 0.42
GARNL3-215ENST00000478702 SEPT9Q9UHD8 586 aaPredicted RBP17.68■□□□□ 0.42
GARNL3-215ENST00000478702 DENND3A2RUS2 1198 aa17.67■□□□□ 0.42
GARNL3-215ENST00000478702 MARCH6O60337 910 aa17.67■□□□□ 0.42
GARNL3-215ENST00000478702 BAG4O95429 457 aaKnown RBP17.67■□□□□ 0.42
GARNL3-215ENST00000478702 FGFR1P11362 822 aa17.67■□□□□ 0.42
GARNL3-215ENST00000478702 CLCN3P51790 818 aa17.67■□□□□ 0.42
GARNL3-215ENST00000478702 PTPN5P54829 565 aa17.67■□□□□ 0.42
GARNL3-215ENST00000478702 VCPP55072 806 aaKnown RBP17.67■□□□□ 0.42
GARNL3-215ENST00000478702 PSMC5P62195 406 aa17.67■□□□□ 0.42
GARNL3-215ENST00000478702 FAM189BP81408 668 aa17.67■□□□□ 0.42
GARNL3-215ENST00000478702 DSC3Q14574 896 aa17.67■□□□□ 0.42
GARNL3-215ENST00000478702 CALCRLQ16602 461 aa17.67■□□□□ 0.42
GARNL3-215ENST00000478702 CEP89Q96ST8 783 aa17.67■□□□□ 0.42
GARNL3-215ENST00000478702 CDCA3Q99618 268 aaPredicted RBP17.67■□□□□ 0.42
GARNL3-215ENST00000478702 OSMRQ99650 979 aa17.67■□□□□ 0.42
GARNL3-215ENST00000478702 NIFKQ9BYG3 293 aaKnown RBP17.67■□□□□ 0.42
GARNL3-215ENST00000478702 AAASQ9NRG9 546 aa17.67■□□□□ 0.42
GARNL3-215ENST00000478702 KIF3AQ9Y496 699 aa17.67■□□□□ 0.42
GARNL3-215ENST00000478702 GTF3C3Q9Y5Q9 886 aa17.67■□□□□ 0.42
GARNL3-215ENST00000478702 DENND4AQ7Z401 1863 aa17.67■□□□□ 0.42
GARNL3-215ENST00000478702 TMEM150BA6NC51 233 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 GPR32O75388 356 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 QARSP47897 775 aaKnown RBP17.66■□□□□ 0.42
GARNL3-215ENST00000478702 ORC2Q13416 577 aaPredicted RBP17.66■□□□□ 0.42
GARNL3-215ENST00000478702 EPHA7Q15375 998 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 KIZQ2M2Z5 673 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 NCAPH2Q6IBW4 605 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 SYCE2Q6PIF2 218 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 TMEM184AQ6ZMB5 413 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 LRRC55Q6ZSA7 311 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 FAM43BQ6ZT52 329 aaPredicted RBP17.66■□□□□ 0.42
GARNL3-215ENST00000478702 NOSTRINQ8IVI9 506 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 SUGP1Q8IWZ8 645 aaKnown RBP17.66■□□□□ 0.42
GARNL3-215ENST00000478702 THNSL1Q8IYQ7 743 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 METTL13Q8N6R0 699 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 MTMR9Q96QG7 549 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 MAP7D2Q96T17 732 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 LXNQ9BS40 222 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 RNF19AQ9NV58 838 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 TMEM161AQ9NX61 479 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 MYO15AQ9UKN7 3530 aa17.66■□□□□ 0.42
GARNL3-215ENST00000478702 GPR182O15218 404 aa17.65■□□□□ 0.42
GARNL3-215ENST00000478702 DKC1O60832 514 aaKnown RBP eCLIP17.65■□□□□ 0.428e-6■□□□□ 10.8
GARNL3-215ENST00000478702 VTNP04004 478 aa17.65■□□□□ 0.42
GARNL3-215ENST00000478702 P4HBP07237 508 aaKnown RBP17.65■□□□□ 0.42
GARNL3-215ENST00000478702 CRYBB1P53674 252 aaPredicted RBP17.65■□□□□ 0.42
GARNL3-215ENST00000478702 PLCB3Q01970 1234 aa17.65■□□□□ 0.42
GARNL3-215ENST00000478702 TBC1D8BQ0IIM8 1120 aa17.65■□□□□ 0.42
GARNL3-215ENST00000478702 MTERF2Q49AM1 385 aa17.65■□□□□ 0.42
GARNL3-215ENST00000478702 PLPP4Q5VZY2 271 aa17.65■□□□□ 0.42
GARNL3-215ENST00000478702 EFCAB12Q6NXP0 572 aa17.65■□□□□ 0.42
GARNL3-215ENST00000478702 ANKRD54Q6NXT1 300 aa17.65■□□□□ 0.42
GARNL3-215ENST00000478702 ANO5Q75V66 913 aa17.65■□□□□ 0.42
GARNL3-215ENST00000478702 LRRC71Q8N4P6 559 aa17.65■□□□□ 0.42
GARNL3-215ENST00000478702 MRPS27Q92552 414 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms