RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 FERMT3Q86UX7 667 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 ANKRD13AQ8IZ07 590 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 OR14C36Q8NHC7 312 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 TGFBRAP1Q8WUH2 860 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 RAX2Q96IS3 184 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 KIAA1683Q9H0B3 1180 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 XYLT2Q9H1B5 865 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 OR10A2Q9H208 303 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 KCTD10Q9H3F6 313 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 TYW1Q9NV66 732 aaKnown RBP5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 PRSS50Q9UI38 385 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 DNAI1Q9UI46 699 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 TRHDEQ9UKU6 1024 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 TMPRSS11EQ9UL52 423 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 INVSQ9Y283 1065 aa5.34□□□□□ -1.55
SMARCA1-204ENST00000478420 MTHFD2P13995 350 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 CNR2P34972 360 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 GPR3P46089 330 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 LGALS4P56470 323 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 NRG3P56975 720 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 SPIDRQ14159 915 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 SURF1Q15526 300 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 SPOCD1Q6ZMY3 1216 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 ARHGEF18Q6ZSZ5 1173 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 USP30Q70CQ3 517 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 AMOTL1Q8IY63 956 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 LPPQ93052 612 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 NKD2Q969F2 451 aaPredicted RBP5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 ORAI2Q96SN7 254 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 OSBPL6Q9BZF3 934 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 CCDC8Q9H0W5 538 aaPredicted RBP5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 EDARQ9UNE0 448 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 SLC4A7Q9Y6M7 1214 aa5.33□□□□□ -1.56
SMARCA1-204ENST00000478420 DAPK3O43293 454 aa5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 FSBPO95073 299 aa5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 CFBP00751 764 aa5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 INHBBP09529 407 aa5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 MRPS9P82933 396 aaKnown RBP5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 ADAM15Q13444 863 aa5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 TRIM25Q14258 630 aaKnown RBP5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 BRDTQ58F21 947 aaPredicted RBP5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 UBXN11Q5T124 520 aa5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 LMBR1LQ6UX01 489 aa5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 LYSMD2Q8IV50 215 aa5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 GLB1L2Q8IW92 636 aa5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 GCDHQ92947 438 aaPredicted RBP5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 QRSL1Q9H0R6 528 aaKnown RBP5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 ADAM7Q9H2U9 754 aa5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 JADE2Q9NQC1 790 aa5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 CCM2LQ9NUG4 571 aaPredicted RBP5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 DNAJC28Q9NX36 388 aa5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 DDX56Q9NY93 547 aaKnown RBP5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 NR2E1Q9Y466 385 aa5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 CDY2AQ9Y6F7 541 aa5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 DUSP10Q9Y6W6 482 aa5.32□□□□□ -1.56
SMARCA1-204ENST00000478420 A0A0A6YYK5 440 aaPredicted RBP5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 GABRDO14764 452 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 ARHGAP6O43182 974 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 LAMTOR5O43504 91 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 CELA3BP08861 270 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 IARSP41252 1262 aaKnown RBP5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 RAC3P60763 192 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 PPP2CBP62714 309 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 PPP2CAP67775 309 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 EXOSC10Q01780 885 aaKnown RBP5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 ABCB5Q2M3G0 1257 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 INAVAQ3KP66 663 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 TOR2AQ5JU69 321 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 ZFYVE27Q5T4F4 411 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 PGM2L1Q6PCE3 622 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 GAREM2Q75VX8 874 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 SLC41A1Q8IVJ1 513 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 CBARPQ8N350 705 aaPredicted RBP5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 AUTS2Q8WXX7 1259 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 TEPSINQ96N21 525 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 CEP89Q96ST8 783 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 SMAD5Q99717 465 aaKnown RBP5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 SOX7Q9BT81 388 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 ASPSCR1Q9BZE9 553 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 PRDM12Q9H4Q4 367 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 MKS1Q9NXB0 559 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 DPP7Q9UHL4 492 aa5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 EVLQ9UI08 416 aaPredicted RBP5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 CTDP1Q9Y5B0 961 aaPredicted RBP5.31□□□□□ -1.56
SMARCA1-204ENST00000478420 ZNF536O15090 1300 aa5.3□□□□□ -1.56
SMARCA1-204ENST00000478420 SHTN1A0MZ66 631 aa5.3□□□□□ -1.56
SMARCA1-204ENST00000478420 TRIM75PA6NK02 468 aa5.3□□□□□ -1.56
SMARCA1-204ENST00000478420 SEC24DO94855 1032 aaPredicted RBP5.3□□□□□ -1.56
SMARCA1-204ENST00000478420 CNOT4O95628 575 aaKnown RBP5.3□□□□□ -1.56
SMARCA1-204ENST00000478420 MT-CO1P00395 513 aa5.3□□□□□ -1.56
SMARCA1-204ENST00000478420 PDGFRBP09619 1106 aa5.3□□□□□ -1.56
SMARCA1-204ENST00000478420 MYBL2P10244 700 aa5.3□□□□□ -1.56
SMARCA1-204ENST00000478420 HNRNPLP14866 589 aaKnown RBP eCLIP5.3□□□□□ -1.56
SMARCA1-204ENST00000478420 SRSF2Q01130 221 aaKnown RBP5.3□□□□□ -1.56
SMARCA1-204ENST00000478420 MGAT5Q09328 741 aa5.3□□□□□ -1.56
SMARCA1-204ENST00000478420 NFYCQ13952 458 aa5.3□□□□□ -1.56
SMARCA1-204ENST00000478420 CLUL1Q15846 466 aa5.3□□□□□ -1.56
SMARCA1-204ENST00000478420 TBR1Q16650 682 aa5.3□□□□□ -1.56
SMARCA1-204ENST00000478420 RNF151Q2KHN1 245 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms