RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 RFC5P40937 340 aa16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 ALDH7A1P49419 539 aaKnown RBP16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 POLGP54098 1239 aaPredicted RBP16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 DLX2Q07687 328 aaPredicted RBP16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 SCRN1Q12765 414 aa16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 ERICH6BQ5W0A0 696 aa16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 TWF2Q6IBS0 349 aaKnown RBP16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 KCNT2Q6UVM3 1135 aa16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 OTUD6AQ7L8S5 288 aa16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 ADGRD2Q7Z7M1 963 aa16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 MSLNLQ96KJ4 702 aa16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 CASD1Q96PB1 797 aa16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 TCF25Q9BQ70 676 aa16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 TRAIPQ9BWF2 469 aa16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 CWH43Q9H720 699 aa16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 STK39Q9UEW8 545 aa16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 KCNJ14Q9UNX9 436 aa16.19■□□□□ 0.18
SMARCE1-209ENST00000478349 IGKV6-21A0A0C4DH24 114 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 EDIL3O43854 480 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 TRIM29Q14134 588 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 NPY5RQ15761 445 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 DUSP6Q16828 381 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 GLB1LQ6UWU2 654 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 PIK3AP1Q6ZUJ8 805 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 CATSPER4Q7RTX7 472 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 TMC7Q7Z402 723 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 RHPN2Q8IUC4 686 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 TMEM87AQ8NBN3 555 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 KHSRPQ92945 711 aaKnown RBP eCLIP16.18■□□□□ 0.186e-7■■■■■ 30.3
SMARCE1-209ENST00000478349 GJA10Q969M2 543 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 PGBD4Q96DM1 585 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 NLRP4Q96MN2 994 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 AIFM3Q96NN9 605 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 LARP6Q9BRS8 491 aaKnown RBP16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 KCNMB3Q9NPA1 279 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 CYP26B1Q9NR63 512 aa16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 ORC3Q9UBD5 711 aaPredicted RBP16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 BARX2Q9UMQ3 279 aaPredicted RBP16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 PIN4Q9Y237 131 aaKnown RBP16.18■□□□□ 0.18
SMARCE1-209ENST00000478349 A0A087WZ62 844 aa16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 FSCN2O14926 492 aa16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 SLC37A4O43826 429 aa16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 HOXB8P17481 243 aaPredicted RBP16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 ATF7P17544 494 aaPredicted RBP16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 KRT2P35908 639 aa16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 SMC1AQ14683 1233 aaKnown RBP16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 PLPP4Q5VZY2 271 aa16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 TCP11Q8WWU5 503 aa16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 PSPC1Q8WXF1 523 aaKnown RBP16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 TMEM169Q96HH4 297 aa16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 ZNF668Q96K58 619 aaPredicted RBP16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 CEP170P1Q96L14 293 aa16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 CCDC43Q96MW1 224 aaKnown RBP16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 FDXACB1Q9BRP7 624 aaPredicted RBP16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 C11orf16Q9NQ32 467 aa16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 PPP4R2Q9NY27 417 aa16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 CLEC1BQ9P126 229 aa16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 COL4A3BPQ9Y5P4 624 aa16.17■□□□□ 0.18
SMARCE1-209ENST00000478349 PHKA2P46019 1235 aa16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 RNASELQ05823 741 aaKnown RBP16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 GIT2Q14161 759 aa16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 PCBP1Q15365 356 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 EPHA7Q15375 998 aa16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 TPRNQ4KMQ1 711 aa16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 HERC4Q5GLZ8 1057 aaPredicted RBP16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 ANO5Q75V66 913 aa16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 ZNF598Q86UK7 904 aaKnown RBP16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 C4orf19Q8IY42 314 aa16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 URGCPQ8TCY9 931 aa16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 HELQQ8TDG4 1101 aa16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 LXNQ9BS40 222 aa16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 PHF7Q9BWX1 381 aaPredicted RBP16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 KCNH6Q9H252 994 aa16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 ZSWIM4Q9H7M6 989 aa16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 RAPGEFL1Q9UHV5 662 aa16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 VAV3Q9UKW4 847 aa16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 TPCN1Q9ULQ1 816 aa16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 USP15Q9Y4E8 981 aaPredicted RBP16.16■□□□□ 0.18
SMARCE1-209ENST00000478349 ASAP2O43150 1006 aa16.15■□□□□ 0.18
SMARCE1-209ENST00000478349 GLP2RO95838 553 aa16.15■□□□□ 0.18
SMARCE1-209ENST00000478349 FGFR4P22455 802 aa16.15■□□□□ 0.18
SMARCE1-209ENST00000478349 YWHABP31946 246 aaKnown RBP16.15■□□□□ 0.18
SMARCE1-209ENST00000478349 AK2P54819 239 aa16.15■□□□□ 0.18
SMARCE1-209ENST00000478349 ERVFC1P60507 584 aa16.15■□□□□ 0.18
SMARCE1-209ENST00000478349 NCBP1Q09161 790 aaKnown RBP16.15■□□□□ 0.18
SMARCE1-209ENST00000478349 CLLU1OSQ5K130 101 aa16.15■□□□□ 0.18
SMARCE1-209ENST00000478349 NCAPH2Q6IBW4 605 aa16.15■□□□□ 0.18
SMARCE1-209ENST00000478349 TMEM184AQ6ZMB5 413 aa16.15■□□□□ 0.18
SMARCE1-209ENST00000478349 SRGAP1Q7Z6B7 1085 aa16.15■□□□□ 0.18
SMARCE1-209ENST00000478349 CASP10Q92851 521 aa16.15■□□□□ 0.18
SMARCE1-209ENST00000478349 MFSD14AQ96MC6 490 aa16.15■□□□□ 0.18
SMARCE1-209ENST00000478349 MYH9P35579 1960 aaKnown RBP16.15■□□□□ 0.18
SMARCE1-209ENST00000478349 PER2O15055 1255 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 ZC3H11AO75152 810 aaKnown RBP eCLIP16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 STBD1O95210 358 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 CA8P35219 290 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 DRP2Q13474 957 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 TFDP1Q14186 410 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 PLA2G4FQ68DD2 849 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 LRRC55Q6ZSA7 311 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms