RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 KIR2DL2P43627 348 aaPredicted RBP6.39□□□□□ -1.39
VPS45-207ENST00000477558 GYG1P46976 350 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 KCNJ4P48050 445 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 GFRA1P56159 465 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 RTP1P59025 263 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 TFCP2Q12800 502 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 EEF1DP3Q658K8 133 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 DENND5AQ6IQ26 1287 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 CEP128Q6ZU80 1094 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 LDHDQ86WU2 507 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 CPNE8Q86YQ8 564 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 OXR1Q8N573 874 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 ANKS4BQ8N8V4 417 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 TMEM145Q8NBT3 493 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 KREMEN2Q8NCW0 462 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 ZNF526Q8TF50 670 aaPredicted RBP6.39□□□□□ -1.39
VPS45-207ENST00000477558 MYLIPQ8WY64 445 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 JMJD8Q96S16 334 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 AARSD1Q9BTE6 412 aaKnown RBP6.39□□□□□ -1.39
VPS45-207ENST00000477558 THSD7BQ9C0I4 1608 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 KANSL2Q9H9L4 492 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 CWC22Q9HCG8 908 aaKnown RBP6.39□□□□□ -1.39
VPS45-207ENST00000477558 ADARB2Q9NS39 739 aaKnown RBP6.39□□□□□ -1.39
VPS45-207ENST00000477558 TMEFF2Q9UIK5 374 aaPredicted RBP6.39□□□□□ -1.39
VPS45-207ENST00000477558 HACL1Q9UJ83 578 aa6.39□□□□□ -1.39
VPS45-207ENST00000477558 FOCADQ5VW36 1801 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 RFX7Q2KHR2 1363 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 PASKQ96RG2 1323 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 SHTN1A0MZ66 631 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 DLX3O60479 287 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 SCG5P05408 212 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 IFIT1P09914 478 aaKnown RBP6.38□□□□□ -1.39
VPS45-207ENST00000477558 SLC5A1P13866 664 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 ENDOUP21128 410 aaKnown RBP6.38□□□□□ -1.39
VPS45-207ENST00000477558 ADORA1P30542 326 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 PHKA1P46020 1223 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 FSTL1Q12841 308 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 SLC14A2Q15849 920 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 USP50Q70EL3 339 aaPredicted RBP6.38□□□□□ -1.39
VPS45-207ENST00000477558 ATG4DQ86TL0 474 aaPredicted RBP6.38□□□□□ -1.39
VPS45-207ENST00000477558 SLCO6A1Q86UG4 719 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 PNMA8AQ86V59 439 aaPredicted RBP6.38□□□□□ -1.39
VPS45-207ENST00000477558 SPPL2CQ8IUH8 684 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 NPLOC4Q8TAT6 608 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 OSBP2Q969R2 916 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 PLCD4Q9BRC7 762 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 DBNLQ9UJU6 430 aaKnown RBP6.38□□□□□ -1.39
VPS45-207ENST00000477558 FPGT-TNNI3KV9GXZ4 949 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 MYH7P12883 1935 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 CDK5RAP2Q96SN8 1893 aa6.38□□□□□ -1.39
VPS45-207ENST00000477558 MYH2Q9UKX2 1941 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 TRAV20A0A0B4J274 112 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 NPHP3-ACAD11A0A0J9YXS1 232 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 FITM1A5D6W6 292 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 HMMRO75330 724 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 SURF6O75683 361 aaKnown RBP6.37□□□□□ -1.39
VPS45-207ENST00000477558 PAPLNO95428 1278 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 TBC1D8O95759 1140 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 PABPC1P11940 636 aaKnown RBP6.37□□□□□ -1.39
VPS45-207ENST00000477558 AFMP43652 599 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 C1QTNF8P60827 252 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 HDAC1Q13547 482 aaPredicted RBP6.37□□□□□ -1.39
VPS45-207ENST00000477558 LAPTM5Q13571 262 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 HSF5Q4G112 596 aaPredicted RBP6.37□□□□□ -1.39
VPS45-207ENST00000477558 HSP90AB4PQ58FF6 505 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 CAVIN4Q5BKX8 364 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 FAM209AQ5JX71 171 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 HLA-DQA1Q5Y7H0 255 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 MBLAC2Q68D91 279 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 TTLL5Q6EMB2 1281 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 ERC1Q8IUD2 1116 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 ABHD4Q8TB40 342 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 SHISA4Q96DD7 197 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 C1orf159Q96HA4 380 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 CCDC140Q96MF4 163 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 MXD3Q9BW11 206 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 DCTPP1Q9H773 170 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 CNOT7Q9UIV1 285 aaKnown RBP6.37□□□□□ -1.39
VPS45-207ENST00000477558 EXOC6BQ9Y2D4 811 aa6.37□□□□□ -1.39
VPS45-207ENST00000477558 DDX60LQ5H9U9 1706 aaKnown RBP6.37□□□□□ -1.39
VPS45-207ENST00000477558 BLACEA4D250 179 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 NRDCO43847 1150 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 PPP1R11O60927 126 aaPredicted RBP6.36□□□□□ -1.39
VPS45-207ENST00000477558 RAB11FIP3O75154 756 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 FGFR1P11362 822 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 PAMP19021 973 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 L1CAMP32004 1257 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 CHRNEQ04844 493 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 G3BP1Q13283 466 aaKnown RBP eCLIP6.36□□□□□ -1.39
VPS45-207ENST00000477558 NR0B2Q15466 257 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 INF2Q27J81 1249 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 SLC35F1Q5T1Q4 408 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 NSMFQ6X4W1 530 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 KSR1Q8IVT5 923 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 CCDC103Q8IW40 242 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 SMC1BQ8NDV3 1235 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 TBC1D22AQ8WUA7 517 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 EAF2Q96CJ1 260 aaPredicted RBP6.36□□□□□ -1.39
VPS45-207ENST00000477558 KIF1BPQ96EK5 621 aa6.36□□□□□ -1.39
VPS45-207ENST00000477558 KIRREL1Q96J84 757 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms