RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 CASD1Q96PB1 797 aa17.37■□□□□ 0.37
COMMD6-209ENST00000477377 POLR3CQ9BUI4 534 aaPredicted RBP17.37■□□□□ 0.37
COMMD6-209ENST00000477377 CWH43Q9H720 699 aa17.37■□□□□ 0.37
COMMD6-209ENST00000477377 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.37■□□□□ 0.37
COMMD6-209ENST00000477377 DNAJB1P25685 340 aa17.36■□□□□ 0.37
COMMD6-209ENST00000477377 CTNNB1P35222 781 aa17.36■□□□□ 0.37
COMMD6-209ENST00000477377 ARL2P36404 184 aa17.36■□□□□ 0.37
COMMD6-209ENST00000477377 FXR2P51116 673 aaKnown RBP eCLIP17.36■□□□□ 0.37
COMMD6-209ENST00000477377 TFF2Q03403 129 aa17.36■□□□□ 0.37
COMMD6-209ENST00000477377 PTGDRQ13258 359 aa17.36■□□□□ 0.37
COMMD6-209ENST00000477377 NLRP4Q96MN2 994 aa17.36■□□□□ 0.37
COMMD6-209ENST00000477377 ASB2Q96Q27 587 aa17.36■□□□□ 0.37
COMMD6-209ENST00000477377 MTRQ99707 1265 aa17.36■□□□□ 0.37
COMMD6-209ENST00000477377 TRAIPQ9BWF2 469 aa17.36■□□□□ 0.37
COMMD6-209ENST00000477377 TUFT1Q9NNX1 390 aa17.36■□□□□ 0.37
COMMD6-209ENST00000477377 CHST12Q9NRB3 414 aa17.36■□□□□ 0.37
COMMD6-209ENST00000477377 THEGQ9P2T0 379 aa17.36■□□□□ 0.37
COMMD6-209ENST00000477377 LRFN2Q9ULH4 789 aa17.36■□□□□ 0.37
COMMD6-209ENST00000477377 PLAGL2Q9UPG8 496 aa17.36■□□□□ 0.37
COMMD6-209ENST00000477377 ZSCAN20P17040 1043 aaPredicted RBP17.35■□□□□ 0.37
COMMD6-209ENST00000477377 IBSPP21815 317 aaPredicted RBP17.35■□□□□ 0.37
COMMD6-209ENST00000477377 RPA1P27694 616 aa17.35■□□□□ 0.37
COMMD6-209ENST00000477377 HOXA11P31270 313 aaPredicted RBP17.35■□□□□ 0.37
COMMD6-209ENST00000477377 CLLU1OSQ5K130 101 aa17.35■□□□□ 0.37
COMMD6-209ENST00000477377 EXOC8Q8IYI6 725 aa17.35■□□□□ 0.37
COMMD6-209ENST00000477377 SPPL3Q8TCT6 385 aa17.35■□□□□ 0.37
COMMD6-209ENST00000477377 ASAP3Q8TDY4 903 aa17.35■□□□□ 0.37
COMMD6-209ENST00000477377 PSPC1Q8WXF1 523 aaKnown RBP17.35■□□□□ 0.37
COMMD6-209ENST00000477377 PLVAPQ9BX97 442 aa17.35■□□□□ 0.37
COMMD6-209ENST00000477377 ATP6V0A4Q9HBG4 840 aa17.35■□□□□ 0.37
COMMD6-209ENST00000477377 TYW1Q9NV66 732 aaKnown RBP17.35■□□□□ 0.37
COMMD6-209ENST00000477377 RWDD3Q9Y3V2 267 aa17.35■□□□□ 0.37
COMMD6-209ENST00000477377 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.34■□□□□ 0.37
COMMD6-209ENST00000477377 TBKBP1A7MCY6 615 aa17.34■□□□□ 0.37
COMMD6-209ENST00000477377 ASAP2O43150 1006 aa17.34■□□□□ 0.37
COMMD6-209ENST00000477377 GAS2O43903 313 aaKnown RBP17.34■□□□□ 0.37
COMMD6-209ENST00000477377 DGAT1O75907 488 aa17.34■□□□□ 0.37
COMMD6-209ENST00000477377 ITGB1P05556 798 aa17.34■□□□□ 0.37
COMMD6-209ENST00000477377 SRGAP2CP0DJJ0 459 aa17.34■□□□□ 0.37
COMMD6-209ENST00000477377 BMP1P13497 986 aa17.34■□□□□ 0.37
COMMD6-209ENST00000477377 MYO7AQ13402 2215 aa17.34■□□□□ 0.37
COMMD6-209ENST00000477377 COL19A1Q14993 1142 aa17.34■□□□□ 0.37
COMMD6-209ENST00000477377 SRGAP1Q7Z6B7 1085 aa17.34■□□□□ 0.37
COMMD6-209ENST00000477377 IFNLR1Q8IU57 520 aaPredicted RBP17.34■□□□□ 0.37
COMMD6-209ENST00000477377 IGSF22Q8N9C0 903 aa17.34■□□□□ 0.37
COMMD6-209ENST00000477377 KLHL23Q8NBE8 558 aa17.34■□□□□ 0.37
COMMD6-209ENST00000477377 P2RX5Q93086 422 aa17.34■□□□□ 0.37
COMMD6-209ENST00000477377 SCLT1Q96NL6 688 aa17.34■□□□□ 0.37
COMMD6-209ENST00000477377 INO80BQ9C086 356 aaPredicted RBP17.34■□□□□ 0.37
COMMD6-209ENST00000477377 ALG13Q9NP73 1137 aaKnown RBP17.34■□□□□ 0.37
COMMD6-209ENST00000477377 DBR1Q9UK59 544 aaKnown RBP17.34■□□□□ 0.37
COMMD6-209ENST00000477377 NOL7Q9UMY1 257 aaKnown RBP17.34■□□□□ 0.37
COMMD6-209ENST00000477377 MEIS3P2A8K0S8 358 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 EOMESO95936 686 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 SFPQP23246 707 aaKnown RBP eCLIP17.33■□□□□ 0.36
COMMD6-209ENST00000477377 GLRA2P23416 452 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 PHKA2P46019 1235 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 PTENP60484 403 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 MRPS5P82675 430 aaKnown RBP17.33■□□□□ 0.36
COMMD6-209ENST00000477377 GNL2Q13823 731 aaKnown RBP17.33■□□□□ 0.36
COMMD6-209ENST00000477377 CAPSQ13938 189 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 PDIA5Q14554 519 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 NAALADL2Q58DX5 795 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 TJAP1Q5JTD0 557 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 UBXN11Q5T124 520 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 POTEGQ6S5H5 508 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 RNF149Q8NC42 400 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 TCP11Q8WWU5 503 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 MMTAG2Q9BU76 263 aaKnown RBP17.33■□□□□ 0.36
COMMD6-209ENST00000477377 C11orf84Q9BUA3 381 aaPredicted RBP17.33■□□□□ 0.36
COMMD6-209ENST00000477377 TMEM117Q9H0C3 514 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 GPRC5CQ9NQ84 441 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 AGPAT5Q9NUQ2 364 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 SMC3Q9UQE7 1217 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 GTF3C3Q9Y5Q9 886 aa17.33■□□□□ 0.36
COMMD6-209ENST00000477377 ZNF623O75123 536 aa17.32■□□□□ 0.36
COMMD6-209ENST00000477377 POU5F1BQ06416 359 aa17.32■□□□□ 0.36
COMMD6-209ENST00000477377 AMHR2Q16671 573 aa17.32■□□□□ 0.36
COMMD6-209ENST00000477377 PTPROQ16827 1216 aa17.32■□□□□ 0.36
COMMD6-209ENST00000477377 TCEAL5Q5H9L2 206 aa17.32■□□□□ 0.36
COMMD6-209ENST00000477377 NACC1Q96RE7 527 aa17.32■□□□□ 0.36
COMMD6-209ENST00000477377 LMAN2LQ9H0V9 348 aa17.32■□□□□ 0.36
COMMD6-209ENST00000477377 DACT1Q9NYF0 836 aa17.32■□□□□ 0.36
COMMD6-209ENST00000477377 COG5Q9UP83 839 aa17.32■□□□□ 0.36
COMMD6-209ENST00000477377 KIF3AQ9Y496 699 aa17.32■□□□□ 0.36
COMMD6-209ENST00000477377 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.32■□□□□ 0.36
COMMD6-209ENST00000477377 PP2D1A8MPX8 630 aa17.31■□□□□ 0.36
COMMD6-209ENST00000477377 MUTP22033 750 aa17.31■□□□□ 0.36
COMMD6-209ENST00000477377 IRS1P35568 1242 aa17.31■□□□□ 0.36
COMMD6-209ENST00000477377 PRPHP41219 470 aa17.31■□□□□ 0.36
COMMD6-209ENST00000477377 KCNQ1P51787 676 aa17.31■□□□□ 0.36
COMMD6-209ENST00000477377 ATP2C1P98194 919 aaPredicted RBP17.31■□□□□ 0.36
COMMD6-209ENST00000477377 MBTD1Q05BQ5 628 aa17.31■□□□□ 0.36
COMMD6-209ENST00000477377 MXD4Q14582 209 aaPredicted RBP17.31■□□□□ 0.36
COMMD6-209ENST00000477377 SKIV2LQ15477 1246 aaKnown RBP17.31■□□□□ 0.36
COMMD6-209ENST00000477377 RILPL1Q5EBL4 403 aa17.31■□□□□ 0.36
COMMD6-209ENST00000477377 LARP1BQ659C4 914 aaKnown RBP17.31■□□□□ 0.36
COMMD6-209ENST00000477377 MCTP1Q6DN14 999 aa17.31■□□□□ 0.36
COMMD6-209ENST00000477377 CATSPER4Q7RTX7 472 aa17.31■□□□□ 0.36
COMMD6-209ENST00000477377 LPPQ93052 612 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms