RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 AKT3Q9Y243 479 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 RBM8AQ9Y5S9 174 aaKnown RBP12.9□□□□□ -0.34
BRCA1-213ENST00000476777 SLC12A7Q9Y666 1083 aa12.9□□□□□ -0.34
BRCA1-213ENST00000476777 CHD6Q8TD26 2715 aa12.9□□□□□ -0.35
BRCA1-213ENST00000476777 MAP1BP46821 2468 aaKnown RBP12.89□□□□□ -0.35
BRCA1-213ENST00000476777 IGLV3-22A0A075B6J6 115 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 IPO5O00410 1097 aaKnown RBP12.89□□□□□ -0.35
BRCA1-213ENST00000476777 DARSP14868 501 aaKnown RBP12.89□□□□□ -0.35
BRCA1-213ENST00000476777 ZNF76P36508 570 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 ADCY7P51828 1080 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 POLGP54098 1239 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-213ENST00000476777 AP3B2Q13367 1082 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 GIT2Q14161 759 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 EFCAB12Q6NXP0 572 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 PPP1R18Q6NYC8 613 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 CCDC149Q6ZUS6 474 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 DDX53Q86TM3 631 aaKnown RBP12.89□□□□□ -0.35
BRCA1-213ENST00000476777 CABP7Q86V35 215 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 PLA2G4DQ86XP0 818 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 ZNF710Q8N1W2 664 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 TMEM87AQ8NBN3 555 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 ACSF2Q96CM8 615 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-213ENST00000476777 ZNF668Q96K58 619 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-213ENST00000476777 MAP7D2Q96T17 732 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 SEMA4AQ9H3S1 761 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 FBXL21Q9UKT6 434 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 CEP131Q9UPN4 1083 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 DOCK8Q8NF50 2099 aa12.89□□□□□ -0.35
BRCA1-213ENST00000476777 CNTNAP5Q8WYK1 1306 aa12.88□□□□□ -0.35
BRCA1-213ENST00000476777 WDR81Q562E7 1941 aa12.88□□□□□ -0.35
BRCA1-213ENST00000476777 ZC3H11AO75152 810 aaKnown RBP eCLIP12.88□□□□□ -0.35
BRCA1-213ENST00000476777 LMNAP02545 664 aaKnown RBP12.88□□□□□ -0.35
BRCA1-213ENST00000476777 FGFR4P22455 802 aa12.88□□□□□ -0.35
BRCA1-213ENST00000476777 TMOD1P28289 359 aa12.88□□□□□ -0.35
BRCA1-213ENST00000476777 CLK2P49760 499 aaKnown RBP12.88□□□□□ -0.35
BRCA1-213ENST00000476777 GPC3P51654 580 aa12.88□□□□□ -0.35
BRCA1-213ENST00000476777 ZNF746Q6NUN9 644 aaPredicted RBP12.88□□□□□ -0.35
BRCA1-213ENST00000476777 MICU3Q86XE3 530 aa12.88□□□□□ -0.35
BRCA1-213ENST00000476777 LRRC71Q8N4P6 559 aa12.88□□□□□ -0.35
BRCA1-213ENST00000476777 KCNG4Q8TDN1 519 aa12.88□□□□□ -0.35
BRCA1-213ENST00000476777 BCL7CQ8WUZ0 217 aaPredicted RBP12.88□□□□□ -0.35
BRCA1-213ENST00000476777 CRYGNQ8WXF5 182 aa12.88□□□□□ -0.35
BRCA1-213ENST00000476777 IGSF21Q96ID5 467 aa12.88□□□□□ -0.35
BRCA1-213ENST00000476777 VN1R3Q9BXE9 311 aa12.88□□□□□ -0.35
BRCA1-213ENST00000476777 SFXN1Q9H9B4 322 aa12.88□□□□□ -0.35
BRCA1-213ENST00000476777 DACT1Q9NYF0 836 aa12.88□□□□□ -0.35
BRCA1-213ENST00000476777 PCDHA10Q9Y5I2 948 aa12.88□□□□□ -0.35
BRCA1-213ENST00000476777 C2orf16Q68DN1 1984 aa12.88□□□□□ -0.35
BRCA1-213ENST00000476777 SMCO2A6NFE2 343 aa12.87□□□□□ -0.35
BRCA1-213ENST00000476777 PSAPP07602 524 aa12.87□□□□□ -0.35
BRCA1-213ENST00000476777 GALTP07902 379 aa12.87□□□□□ -0.35
BRCA1-213ENST00000476777 CYP3A4P08684 503 aa12.87□□□□□ -0.35
BRCA1-213ENST00000476777 FUT2Q10981 343 aa12.87□□□□□ -0.35
BRCA1-213ENST00000476777 PTPN14Q15678 1187 aa12.87□□□□□ -0.35
BRCA1-213ENST00000476777 LETM2Q2VYF4 491 aa12.87□□□□□ -0.35
BRCA1-213ENST00000476777 DGLUCYQ7Z3D6 616 aa12.87□□□□□ -0.35
BRCA1-213ENST00000476777 SGMS1Q86VZ5 419 aa12.87□□□□□ -0.35
BRCA1-213ENST00000476777 PPFIBP1Q86W92 1011 aa12.87□□□□□ -0.35
BRCA1-213ENST00000476777 SMAP1Q8IYB5 467 aaPredicted RBP12.87□□□□□ -0.35
BRCA1-213ENST00000476777 ZNF577Q9BSK1 485 aa12.87□□□□□ -0.35
BRCA1-213ENST00000476777 LRRC2Q9BYS8 371 aa12.87□□□□□ -0.35
BRCA1-213ENST00000476777 TBC1D22BQ9NU19 505 aa12.87□□□□□ -0.35
BRCA1-213ENST00000476777 IGSF9Q9P2J2 1179 aa12.87□□□□□ -0.35
BRCA1-213ENST00000476777 GABBR1Q9UBS5 961 aa12.87□□□□□ -0.35
BRCA1-213ENST00000476777 FANCMQ8IYD8 2048 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 CFAP47Q6ZTR5 3102 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 KRBA1A5PL33 1030 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 CARNS1A5YM72 827 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 NARSO43776 548 aaKnown RBP12.86□□□□□ -0.35
BRCA1-213ENST00000476777 N4BP1O75113 896 aaKnown RBP12.86□□□□□ -0.35
BRCA1-213ENST00000476777 CSDE1O75534 798 aaKnown RBP12.86□□□□□ -0.35
BRCA1-213ENST00000476777 PHKA2P46019 1235 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 CLCN4P51793 760 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 JAKMIP3Q5VZ66 844 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 KIAA2013Q8IYS2 634 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 RSPH1Q8WYR4 309 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 LPPQ93052 612 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 FAM167AQ96KS9 214 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 TRAIPQ9BWF2 469 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 GLT8D2Q9H1C3 349 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 NRDE2Q9H7Z3 1164 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 CHST12Q9NRB3 414 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 TBC1D13Q9NVG8 400 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 BARHL2Q9NY43 387 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 WNT16Q9UBV4 365 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 R4GN57 208 aa12.86□□□□□ -0.35
BRCA1-213ENST00000476777 V9GY48 417 aaPredicted RBP12.86□□□□□ -0.35
BRCA1-213ENST00000476777 CNOT1A5YKK6 2376 aaKnown RBP12.85□□□□□ -0.35
BRCA1-213ENST00000476777 hCG_1984214I3L0E3 225 aa12.85□□□□□ -0.35
BRCA1-213ENST00000476777 ZNF862O60290 1169 aa12.85□□□□□ -0.35
BRCA1-213ENST00000476777 LILRB3O75022 631 aa12.85□□□□□ -0.35
BRCA1-213ENST00000476777 CNPP09543 421 aaKnown RBP12.85□□□□□ -0.35
BRCA1-213ENST00000476777 SETQ01105 290 aaPredicted RBP12.85□□□□□ -0.35
BRCA1-213ENST00000476777 C15orf39Q6ZRI6 1047 aa12.85□□□□□ -0.35
BRCA1-213ENST00000476777 ZNF713Q8N859 430 aaPredicted RBP12.85□□□□□ -0.35
BRCA1-213ENST00000476777 NLRP7Q8WX94 980 aa12.85□□□□□ -0.35
BRCA1-213ENST00000476777 SCLT1Q96NL6 688 aa12.85□□□□□ -0.35
BRCA1-213ENST00000476777 KLHL5Q96PQ7 755 aa12.85□□□□□ -0.35
BRCA1-213ENST00000476777 SPDYE4A6NLX3 237 aa12.84□□□□□ -0.35
BRCA1-213ENST00000476777 MEIS3P2A8K0S8 358 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms