RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 ARHGEF18Q6ZSZ5 1173 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 NRG4Q8WWG1 115 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 IRGQQ8WZA9 623 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 HES6Q96HZ4 224 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 PITPNM3Q9BZ71 974 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 GOLPH3Q9H4A6 298 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 PCDH18Q9HCL0 1135 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 LNPEPQ9UIQ6 1025 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 PAIP2BQ9ULR5 123 aaKnown RBP14.88□□□□□ -0.03
HDAC1-206ENST00000476391 CHKBQ9Y259 395 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 STARD13Q9Y3M8 1113 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 COL22A1Q8NFW1 1626 aaPredicted RBP14.88□□□□□ -0.03
HDAC1-206ENST00000476391 PHRF1Q9P1Y6 1649 aaKnown RBP14.88□□□□□ -0.03
HDAC1-206ENST00000476391 HNRNPRO43390 633 aaKnown RBP14.88□□□□□ -0.03
HDAC1-206ENST00000476391 FGGP02679 453 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 T-ENOLP0DO92 83 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 AMPD3Q01432 767 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 RCN1Q15293 331 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 FOXR2Q6PJQ5 311 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 PROSER2Q86WR7 435 aaPredicted RBP14.88□□□□□ -0.03
HDAC1-206ENST00000476391 ZNF653Q96CK0 615 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 ASCC2Q9H1I8 757 aaPredicted RBP14.88□□□□□ -0.03
HDAC1-206ENST00000476391 RNF41Q9H4P4 317 aaPredicted RBP14.88□□□□□ -0.03
HDAC1-206ENST00000476391 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.88□□□□□ -0.03
HDAC1-206ENST00000476391 ZNF212Q9UDV6 495 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 CCDC88AQ3V6T2 1871 aa14.88□□□□□ -0.03
HDAC1-206ENST00000476391 A0A0A6YYK5 440 aaPredicted RBP14.87□□□□□ -0.03
HDAC1-206ENST00000476391 TCRBV5S4A2TA0A5A2 114 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 ITGA2BP08514 1039 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 PABPC4LP0CB38 370 aaKnown RBP14.87□□□□□ -0.03
HDAC1-206ENST00000476391 PDE6AP16499 860 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 YY1P25490 414 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 HOXA7P31268 230 aaPredicted RBP14.87□□□□□ -0.03
HDAC1-206ENST00000476391 NPEPPSP55786 919 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 POLR2FP61218 127 aaKnown RBP14.87□□□□□ -0.03
HDAC1-206ENST00000476391 STRN3Q13033 797 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 ASIC2Q16515 512 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 SLC4A8Q2Y0W8 1093 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 DAB2IPQ5VWQ8 1189 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 NT5DC3Q86UY8 548 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 NME8Q8N427 588 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 ABTB2Q8N961 1025 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 SLC35B4Q969S0 331 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 TANGO6Q9C0B7 1094 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 ATAD5Q96QE3 1844 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 E2F6O75461 281 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 IDH1O75874 414 aaKnown RBP14.87□□□□□ -0.03
HDAC1-206ENST00000476391 MAPK7Q13164 816 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 CBX3Q13185 183 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 RAPGEF1Q13905 1077 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 SEC23AQ15436 765 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 KLC3Q6P597 504 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 SEPT14Q6ZU15 432 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 UNC13DQ70J99 1090 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 JAMLQ86YT9 394 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.87□□□□□ -0.031e-6■■■■■ 29.4
HDAC1-206ENST00000476391 STX18Q9P2W9 335 aaKnown RBP14.87□□□□□ -0.03
HDAC1-206ENST00000476391 SNX24Q9Y343 169 aa14.87□□□□□ -0.03
HDAC1-206ENST00000476391 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.87□□□□□ -0.03
HDAC1-206ENST00000476391 hCG_1642624A0A1W2PR95 340 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 CAPN9O14815 690 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 ZNF189O75820 626 aaPredicted RBP14.86□□□□□ -0.03
HDAC1-206ENST00000476391 RTP1P59025 263 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 PHEXP78562 749 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 MARK2Q7KZI7 788 aaKnown RBP14.86□□□□□ -0.03
HDAC1-206ENST00000476391 ANKRD42Q8N9B4 389 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 GDAP1Q8TB36 358 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 ESR2Q92731 530 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 CATSPER2Q96P56 530 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 KCNK9Q9NPC2 374 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 GRHL1Q9NZI5 618 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 BCORQ6W2J9 1755 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 TJP1Q07157 1748 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 PP2D1A8MPX8 630 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 TAC1P20366 129 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 LRRC55Q6ZSA7 311 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 HS2ST1Q7LGA3 356 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 GUF1Q8N442 669 aaKnown RBP14.86□□□□□ -0.03
HDAC1-206ENST00000476391 NAT14Q8WUY8 206 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 LSM14BQ9BX40 385 aaKnown RBP14.86□□□□□ -0.03
HDAC1-206ENST00000476391 ETNK2Q9NVF9 386 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 HSFX1Q9UBD0 423 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 BIN2Q9UBW5 565 aaPredicted RBP14.86□□□□□ -0.03
HDAC1-206ENST00000476391 TUBGCP4Q9UGJ1 667 aa14.86□□□□□ -0.03
HDAC1-206ENST00000476391 PODXLO00592 558 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 ATP9BO43861 1147 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 RAD21O60216 631 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 UBTFL6P0CB48 400 aaPredicted RBP14.85□□□□□ -0.03
HDAC1-206ENST00000476391 IDO1P14902 403 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 ZNF24P17028 368 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 TATP17735 454 aaPredicted RBP14.85□□□□□ -0.03
HDAC1-206ENST00000476391 FGFR4P22455 802 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 KCTD19Q17RG1 926 aaPredicted RBP14.85□□□□□ -0.03
HDAC1-206ENST00000476391 TMEM259Q4ZIN3 620 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 PPP1R21Q6ZMI0 780 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 TRMT10CQ7L0Y3 403 aaKnown RBP14.85□□□□□ -0.03
HDAC1-206ENST00000476391 FAM133AQ8N9E0 248 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 LRRC15Q8TF66 581 aa14.85□□□□□ -0.03
HDAC1-206ENST00000476391 PIH1D3Q9NQM4 214 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms