RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 NLRP7Q8WX94 980 aa18.11■□□□□ 0.49
COL1A1-205ENST00000476387 KHSRPQ92945 711 aaKnown RBP eCLIP18.11■□□□□ 0.49
COL1A1-205ENST00000476387 TTC12Q9H892 705 aaPredicted RBP18.11■□□□□ 0.49
COL1A1-205ENST00000476387 NOL7Q9UMY1 257 aaKnown RBP18.11■□□□□ 0.49
COL1A1-205ENST00000476387 TMEM150BA6NC51 233 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 WNT7AO00755 349 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 TBX10O75333 385 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 CSPG5O95196 566 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 GTF2F1P35269 517 aaKnown RBP eCLIP18.1■□□□□ 0.49
COL1A1-205ENST00000476387 IRS1P35568 1242 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 TXKP42681 527 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 CYP4A11Q02928 519 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 ZP2Q05996 745 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 SPIRE1Q08AE8 756 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 ORC2Q13416 577 aaPredicted RBP18.1■□□□□ 0.49
COL1A1-205ENST00000476387 SMAD2Q15796 467 aaKnown RBP18.1■□□□□ 0.49
COL1A1-205ENST00000476387 TMEM31Q5JXX7 168 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 PLA2G4FQ68DD2 849 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 PDE12Q6L8Q7 609 aaKnown RBP18.1■□□□□ 0.49
COL1A1-205ENST00000476387 ECHDC2Q86YB7 292 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 ADHFE1Q8IWW8 467 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 DYDC2Q96IM9 177 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 JPH2Q9BR39 696 aaPredicted RBP18.1■□□□□ 0.49
COL1A1-205ENST00000476387 BACH2Q9BYV9 841 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 GCOM2Q9BZD3 368 aaPredicted RBP18.1■□□□□ 0.49
COL1A1-205ENST00000476387 IGFLR1Q9H665 355 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 CWH43Q9H720 699 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 DACT1Q9NYF0 836 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 LZTS1Q9Y250 596 aa18.1■□□□□ 0.49
COL1A1-205ENST00000476387 A0A0U1RQF3 1178 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 FSD2A1L4K1 749 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 GPR37L1O60883 481 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 MAFO75444 373 aaPredicted RBP18.09■□□□□ 0.49
COL1A1-205ENST00000476387 FGF18O76093 207 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 EOMESO95936 686 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 DLX2Q07687 328 aaPredicted RBP18.09■□□□□ 0.49
COL1A1-205ENST00000476387 DRP2Q13474 957 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 SMAD4Q13485 552 aaKnown RBP18.09■□□□□ 0.49
COL1A1-205ENST00000476387 TTC38Q5R3I4 469 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 ANO5Q75V66 913 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 ADGRD2Q7Z7M1 963 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 ZNF410Q86VK4 478 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 C4orf19Q8IY42 314 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 THNSL1Q8IYQ7 743 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 ABI1Q8IZP0 508 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 LRRC43Q8N309 656 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 RSPH1Q8WYR4 309 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 ZNF668Q96K58 619 aaPredicted RBP18.09■□□□□ 0.49
COL1A1-205ENST00000476387 CASD1Q96PB1 797 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 SH2D3AQ9BRG2 576 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 ZSWIM4Q9H7M6 989 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 TLR9Q9NR96 1032 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 CHST12Q9NRB3 414 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 RNF19AQ9NV58 838 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 RGL1Q9NZL6 768 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 CD207Q9UJ71 328 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 PPME1Q9Y570 386 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 GTF3C3Q9Y5Q9 886 aa18.09■□□□□ 0.49
COL1A1-205ENST00000476387 PLXNA4Q9HCM2 1894 aa18.08■□□□□ 0.49
COL1A1-205ENST00000476387 C19orf67A6NJJ6 358 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 LINC01565O15544 149 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 MBTPS2O43462 519 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 GJB2P29033 226 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 TRAPPC10P48553 1259 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 NDUFV1P49821 464 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 PLCB3Q01970 1234 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 CTTNQ14247 550 aaKnown RBP18.08■□□□□ 0.48
COL1A1-205ENST00000476387 OTUD6AQ7L8S5 288 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 ZNF598Q86UK7 904 aaKnown RBP18.08■□□□□ 0.48
COL1A1-205ENST00000476387 EXOC8Q8IYI6 725 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 SLC7A3Q8WY07 619 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 MSLNLQ96KJ4 702 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 CEP170P1Q96L14 293 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 CCDC43Q96MW1 224 aaKnown RBP18.08■□□□□ 0.48
COL1A1-205ENST00000476387 MTMR9Q96QG7 549 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 POP1Q99575 1024 aaKnown RBP18.08■□□□□ 0.48
COL1A1-205ENST00000476387 CDCA3Q99618 268 aaPredicted RBP18.08■□□□□ 0.48
COL1A1-205ENST00000476387 EIF2AK1Q9BQI3 630 aaKnown RBP18.08■□□□□ 0.48
COL1A1-205ENST00000476387 LRFN3Q9BTN0 628 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 TRAIPQ9BWF2 469 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 INO80BQ9C086 356 aaPredicted RBP18.08■□□□□ 0.48
COL1A1-205ENST00000476387 CYP26B1Q9NR63 512 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 SUCLA2Q9P2R7 463 aaPredicted RBP18.08■□□□□ 0.48
COL1A1-205ENST00000476387 SMC3Q9UQE7 1217 aa18.08■□□□□ 0.48
COL1A1-205ENST00000476387 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.08■□□□□ 0.48
COL1A1-205ENST00000476387 H3BQV1 296 aa18.07■□□□□ 0.48
COL1A1-205ENST00000476387 EYA4O95677 639 aa18.07■□□□□ 0.48
COL1A1-205ENST00000476387 OR52Z1P0C646 297 aa18.07■□□□□ 0.48
COL1A1-205ENST00000476387 ALADP13716 330 aa18.07■□□□□ 0.48
COL1A1-205ENST00000476387 SFPQP23246 707 aaKnown RBP eCLIP18.07■□□□□ 0.48
COL1A1-205ENST00000476387 YWHABP31946 246 aaKnown RBP18.07■□□□□ 0.48
COL1A1-205ENST00000476387 PPM1AP35813 382 aa18.07■□□□□ 0.48
COL1A1-205ENST00000476387 NRIP1P48552 1158 aa18.07■□□□□ 0.48
COL1A1-205ENST00000476387 POLGP54098 1239 aaPredicted RBP18.07■□□□□ 0.48
COL1A1-205ENST00000476387 COASYQ13057 564 aa18.07■□□□□ 0.48
COL1A1-205ENST00000476387 ZNF174Q15697 407 aa18.07■□□□□ 0.48
COL1A1-205ENST00000476387 CLUL1Q15846 466 aa18.07■□□□□ 0.48
COL1A1-205ENST00000476387 MCTP1Q6DN14 999 aa18.07■□□□□ 0.48
COL1A1-205ENST00000476387 TPH2Q8IWU9 490 aa18.07■□□□□ 0.48
COL1A1-205ENST00000476387 TMEM60Q9H2L4 133 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms