RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.1□□□□□ -1.59
VPS13D-207ENST00000476169 IPPQ9Y573 584 aa5.1□□□□□ -1.59
VPS13D-207ENST00000476169 ST20-MTHFSA0A0A6YYL1 179 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 PRSS38A1L453 326 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 KLRG2A4D1S0 409 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-207ENST00000476169 A6NNZ2 444 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 ELL2O00472 640 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-207ENST00000476169 ZNF500O60304 480 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-207ENST00000476169 COL6A1P12109 1028 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 AKAP5P24588 427 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 MC4RP32245 332 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 MTNR1BP49286 362 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 RENBPP51606 427 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 GEMIN4P57678 1058 aaKnown RBP5.09□□□□□ -1.59
VPS13D-207ENST00000476169 MRPS9P82933 396 aaKnown RBP5.09□□□□□ -1.59
VPS13D-207ENST00000476169 PRR5P85299 388 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 SLC6A3Q01959 620 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 ROM1Q03395 351 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 IFIT5Q13325 482 aaKnown RBP5.09□□□□□ -1.59
VPS13D-207ENST00000476169 PDCD2Q16342 344 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-207ENST00000476169 KIAA0753Q2KHM9 967 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 PITRM1Q5JRX3 1037 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 ZBTB41Q5SVQ8 909 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 ADGRF1Q5T601 910 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 B3GNT9Q6UX72 402 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 RPTNQ6XPR3 784 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 FAM126BQ8IXS8 530 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 GPATCH11Q8N954 259 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 FAM156AQ8NDB6 213 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 TSPAN17Q96FV3 270 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 TOE1Q96GM8 510 aaKnown RBP5.09□□□□□ -1.59
VPS13D-207ENST00000476169 MAML3Q96JK9 1138 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 FAM193BQ96PV7 902 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-207ENST00000476169 MAP3K14Q99558 947 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 ACO2Q99798 780 aaKnown RBP5.09□□□□□ -1.59
VPS13D-207ENST00000476169 FOXB1Q99853 325 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 WNT8AQ9H1J5 351 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 ZNF277Q9NRM2 450 aaPredicted RBP5.09□□□□□ -1.59
VPS13D-207ENST00000476169 BTBD7Q9P203 1132 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 LRCH1Q9Y2L9 728 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 YBX2Q9Y2T7 364 aaKnown RBP5.09□□□□□ -1.59
VPS13D-207ENST00000476169 DGKBQ9Y6T7 804 aa5.09□□□□□ -1.59
VPS13D-207ENST00000476169 DYTNA2CJ06 578 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 NDUFS2O75306 463 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 ZBED1O96006 694 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 WNT11O96014 354 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 PRLP01236 227 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 LPLP06858 475 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 LDHCP07864 332 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 PTMSP20962 102 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 C5AR1P21730 350 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 AFMP43652 599 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 MAPKAPK2P49137 400 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 SLC5A3P53794 718 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 ADKP55263 362 aaKnown RBP5.08□□□□□ -1.6
VPS13D-207ENST00000476169 ALDH6A1Q02252 535 aaKnown RBP5.08□□□□□ -1.6
VPS13D-207ENST00000476169 ADCY2Q08462 1091 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 MYBPC3Q14896 1274 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 PUM3Q15397 648 aaKnown RBP5.08□□□□□ -1.6
VPS13D-207ENST00000476169 ZNF792Q3KQV3 632 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 UAP1L1Q3KQV9 507 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 PLEKHN1Q494U1 663 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-207ENST00000476169 SLFN12LQ6IEE8 588 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 CHST15Q7LFX5 561 aaPredicted RBP5.08□□□□□ -1.6
VPS13D-207ENST00000476169 KCNK18Q7Z418 384 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS13D-207ENST00000476169 AUTS2Q8WXX7 1259 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 SLC2A13Q96QE2 648 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 TBCBQ99426 244 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 CRB3Q9BUF7 120 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 APOL5Q9BWW9 433 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 KCTD10Q9H3F6 313 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 BCAS3Q9H6U6 928 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 PCMTD2Q9NV79 361 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 UCKL1Q9NWZ5 548 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 ZNF69Q9UC07 566 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 PTPN22Q9Y2R2 807 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 HCFC2Q9Y5Z7 792 aa5.08□□□□□ -1.6
VPS13D-207ENST00000476169 TCERG1O14776 1098 aaKnown RBP5.07□□□□□ -1.6
VPS13D-207ENST00000476169 LRG1P02750 347 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 TYRP1P17643 537 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 PTGS1P23219 599 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 STAT5AP42229 794 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 ECE1P42892 770 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 CCT5P48643 541 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 ALDH5A1P51649 535 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-207ENST00000476169 LGALS4P56470 323 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 KIF23Q02241 960 aaPredicted RBP5.07□□□□□ -1.6
VPS13D-207ENST00000476169 TMEM62Q0P6H9 643 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 KRT72Q14CN4 511 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 MBNL2Q5VZF2 373 aaKnown RBP5.07□□□□□ -1.6
VPS13D-207ENST00000476169 CD276Q5ZPR3 534 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 KIAA1841Q6NSI8 718 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 LILRA6Q6PI73 481 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 CCDC174Q6PII3 467 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 TEPPQ6URK8 271 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 ETV3LQ6ZN32 361 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 MIB1Q86YT6 1006 aa5.07□□□□□ -1.6
VPS13D-207ENST00000476169 CLASRPQ8N2M8 674 aaKnown RBP5.07□□□□□ -1.6
VPS13D-207ENST00000476169 PPM1NQ8N819 430 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms