RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 TMEM265A0A087WTH1 108 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 SEPT4O43236 478 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 CNMDO75829 334 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 PAPLNO95428 1278 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 HSP90AA1P07900 732 aaKnown RBP4.94□□□□□ -1.62
VPS13D-206ENST00000476045 CYBAP13498 195 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 GSPT1P15170 499 aaKnown RBP4.94□□□□□ -1.62
VPS13D-206ENST00000476045 ADORA2AP29274 412 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 GUCY1A2P33402 732 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 TDO2P48775 406 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 LIG3P49916 1009 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 CLCN7P51798 805 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 OAZ1P54368 228 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 JAG1P78504 1218 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 CACNB2Q08289 660 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-206ENST00000476045 SHROOM1Q2M3G4 852 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-206ENST00000476045 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-206ENST00000476045 C12orf40Q86WS4 652 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 TP53INP2Q8IXH6 220 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 C7orf61Q8IZ16 206 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 ARRDC4Q8NCT1 418 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 ZNF507Q8TCN5 953 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 ACER1Q8TDN7 264 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 OTUD7AQ8TE49 926 aaPredicted RBP4.94□□□□□ -1.62
VPS13D-206ENST00000476045 DIS3LQ8TF46 1054 aaKnown RBP4.94□□□□□ -1.62
VPS13D-206ENST00000476045 SNX21Q969T3 373 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 EDC3Q96F86 508 aaKnown RBP4.94□□□□□ -1.62
VPS13D-206ENST00000476045 PAWRQ96IZ0 340 aaKnown RBP4.94□□□□□ -1.62
VPS13D-206ENST00000476045 TEX13BQ9BXU2 312 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 BOLA2Q9H3K6 86 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 DCTPP1Q9H773 170 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 ARMT1Q9H993 441 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 FBRSQ9HAH7 460 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 NYAP2Q9P242 653 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 FBXO40Q9UH90 709 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 GTF2IRD1Q9UHL9 959 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 PNMA2Q9UL42 364 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 SLC4A4Q9Y6R1 1079 aa4.94□□□□□ -1.62
VPS13D-206ENST00000476045 CDH23Q9H251 3354 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 A0A1W2PRG0 241 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 BDP1A6H8Y1 2624 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 ATP2A1O14983 1001 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 RNF113AO15541 343 aaKnown RBP4.93□□□□□ -1.62
VPS13D-206ENST00000476045 GPAA1O43292 621 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 SLITRK5O94991 958 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 TTLL1O95922 423 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 CD8BP10966 210 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 PCP11498 1178 aaKnown RBP4.93□□□□□ -1.62
VPS13D-206ENST00000476045 FCER1AP12319 257 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 XRCC6P12956 609 aaKnown RBP eCLIP4.93□□□□□ -1.62
VPS13D-206ENST00000476045 AKR1B1P15121 316 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 MX1P20591 662 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 TXKP42681 527 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 CDK8P49336 464 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 PDE4BQ07343 736 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 KCTD2Q14681 263 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 SNX17Q15036 470 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 CCDC85BQ15834 202 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-206ENST00000476045 NKPD1Q17RQ9 610 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 ZNF792Q3KQV3 632 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 LRIT3Q3SXY7 679 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 WIPI1Q5MNZ9 446 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-206ENST00000476045 TTC22Q5TAA0 569 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 HDXQ7Z353 690 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 DPP9Q86TI2 863 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 RIOX2Q8IUF8 465 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 TDHQ8IZJ6 230 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 SLC44A5Q8NCS7 719 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 GMCL1P1Q8NEA9 526 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 TNPO1Q92973 898 aaKnown RBP4.93□□□□□ -1.62
VPS13D-206ENST00000476045 CRELD1Q96HD1 420 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 HRASLS5Q96KN8 279 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 KIF2CQ99661 725 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 GDF15Q99988 308 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 SLF1Q9BQI6 1058 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 MOV10L1Q9BXT6 1211 aaKnown RBP4.93□□□□□ -1.62
VPS13D-206ENST00000476045 PANK2Q9BZ23 570 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 RRAGDQ9NQL2 400 aaPredicted RBP4.93□□□□□ -1.62
VPS13D-206ENST00000476045 BTBD7Q9P203 1132 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 PARP2Q9UGN5 583 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 ADAMTS5Q9UNA0 930 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 MROH7Q68CQ1 1323 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 SCN10AQ9Y5Y9 1956 aa4.93□□□□□ -1.62
VPS13D-206ENST00000476045 KIAA1217Q5T5P2 1943 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 LOC102724159A0A0B4J2E5 919 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 FSD2A1L4K1 749 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 VWA5AO00534 786 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 CYP2D6P10635 497 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 RARBP10826 455 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 EEF2P13639 858 aaKnown RBP4.92□□□□□ -1.62
VPS13D-206ENST00000476045 AKR1A1P14550 325 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 TFE3P19532 575 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-206ENST00000476045 DDIT3P35638 169 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 MAGEA10P43363 369 aaPredicted RBP4.92□□□□□ -1.62
VPS13D-206ENST00000476045 PLS1Q14651 629 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 PWP2Q15269 919 aaKnown RBP4.92□□□□□ -1.62
VPS13D-206ENST00000476045 TKFCQ3LXA3 575 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 MEI1Q5TIA1 1274 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 CTR9Q6PD62 1173 aa4.92□□□□□ -1.62
VPS13D-206ENST00000476045 RNF180Q86T96 592 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms