RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 HAUS6Q7Z4H7 955 aa11.21□□□□□ -0.61
PCCB-213ENST00000475214 TRIM59Q8IWR1 403 aa11.21□□□□□ -0.61
PCCB-213ENST00000475214 C17orf53Q8N3J3 647 aaPredicted RBP11.21□□□□□ -0.61
PCCB-213ENST00000475214 ZNF397Q8NF99 534 aaPredicted RBP11.21□□□□□ -0.61
PCCB-213ENST00000475214 RAET1EQ8TD07 263 aa11.21□□□□□ -0.61
PCCB-213ENST00000475214 SPIRE2Q8WWL2 714 aa11.21□□□□□ -0.61
PCCB-213ENST00000475214 HVCN1Q96D96 273 aa11.21□□□□□ -0.61
PCCB-213ENST00000475214 ZNF333Q96JL9 665 aa11.21□□□□□ -0.61
PCCB-213ENST00000475214 IFT74Q96LB3 600 aa11.21□□□□□ -0.61
PCCB-213ENST00000475214 MKNK1Q9BUB5 465 aa11.21□□□□□ -0.61
PCCB-213ENST00000475214 NIFKQ9BYG3 293 aaKnown RBP11.21□□□□□ -0.61
PCCB-213ENST00000475214 KMT5AQ9NQR1 393 aa11.21□□□□□ -0.61
PCCB-213ENST00000475214 KCND1Q9NSA2 647 aa11.21□□□□□ -0.61
PCCB-213ENST00000475214 ARMCX3Q9UH62 379 aaPredicted RBP11.21□□□□□ -0.61
PCCB-213ENST00000475214 CPA4Q9UI42 421 aa11.21□□□□□ -0.61
PCCB-213ENST00000475214 LUC7L2Q9Y383 392 aaKnown RBP11.21□□□□□ -0.61
PCCB-213ENST00000475214 PPME1Q9Y570 386 aa11.21□□□□□ -0.61
PCCB-213ENST00000475214 PTCH2Q9Y6C5 1203 aa11.21□□□□□ -0.61
PCCB-213ENST00000475214 ARID2Q68CP9 1835 aa11.21□□□□□ -0.62
PCCB-213ENST00000475214 ZMYM2Q9UBW7 1377 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 SLC15A5A6NIM6 579 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 SLC16A4O15374 487 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 OFD1O75665 1012 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 CAPN2P17655 700 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 ATP4AP20648 1035 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 KRT9P35527 623 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 PSMC2P35998 433 aaKnown RBP11.2□□□□□ -0.62
PCCB-213ENST00000475214 RFC5P40937 340 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 FXR1P51114 621 aaKnown RBP eCLIP11.2□□□□□ -0.62
PCCB-213ENST00000475214 GTF2BQ00403 316 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 CCDC62Q6P9F0 684 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 MAMDC4Q6UXC1 1216 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 PLPPR4Q7Z2D5 763 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 KSR1Q8IVT5 923 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 EXOC8Q8IYI6 725 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 GLG1Q92896 1179 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 SPATA33Q96N06 139 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 GPR20Q99678 358 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 GPRC5CQ9NQ84 441 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 PDLIM7Q9NR12 457 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 AGPAT3Q9NRZ7 376 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 ABHD10Q9NUJ1 306 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 SRRDQ9UH36 339 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 CAPN11Q9UMQ6 739 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 FRMD4BQ9Y2L6 1034 aa11.2□□□□□ -0.62
PCCB-213ENST00000475214 A0A1W2PQJ5 194 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 RBM47A0AV96 593 aaKnown RBP11.19□□□□□ -0.62
PCCB-213ENST00000475214 TTC26A0AVF1 554 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 ZSCAN12O43309 604 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 LGR5O75473 907 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 AKAP3O75969 853 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 GH1P01241 217 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 AFPP02771 609 aaKnown RBP11.19□□□□□ -0.62
PCCB-213ENST00000475214 XRCC5P13010 732 aaKnown RBP11.19□□□□□ -0.62
PCCB-213ENST00000475214 EN2P19622 333 aaPredicted RBP11.19□□□□□ -0.62
PCCB-213ENST00000475214 SCP2P22307 547 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 NPTX2P47972 431 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 SLC26A2P50443 739 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 CAP1Q01518 475 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 LAMC2Q13753 1193 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 EMC2Q15006 297 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 TMTC1Q8IUR5 882 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 TMEM139Q8IV31 216 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 SLC9A9Q8IVB4 645 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 CCAR2Q8N163 923 aaKnown RBP11.19□□□□□ -0.62
PCCB-213ENST00000475214 MSL3Q8N5Y2 521 aaKnown RBP11.19□□□□□ -0.62
PCCB-213ENST00000475214 NEK11Q8NG66 645 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 OR8K1Q8NGG5 319 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 SLC7A3Q8WY07 619 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 BBXQ8WY36 941 aaPredicted RBP11.19□□□□□ -0.62
PCCB-213ENST00000475214 PCYT2Q99447 389 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 NTPCRQ9BSD7 190 aaKnown RBP11.19□□□□□ -0.62
PCCB-213ENST00000475214 POLR3FQ9H1D9 316 aaPredicted RBP11.19□□□□□ -0.62
PCCB-213ENST00000475214 SMARCAD1Q9H4L7 1026 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 MMRN2Q9H8L6 949 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 PDGFCQ9NRA1 345 aa11.19□□□□□ -0.62
PCCB-213ENST00000475214 ZNHIT6Q9NWK9 470 aaKnown RBP11.19□□□□□ -0.62
PCCB-213ENST00000475214 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.19□□□□□ -0.62
PCCB-213ENST00000475214 EMSYQ7Z589 1322 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 ADGRA2Q96PE1 1338 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 MCM3APO60318 1980 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 NKRFO15226 690 aaKnown RBP eCLIP11.18□□□□□ -0.62
PCCB-213ENST00000475214 EXOC3O60645 756 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 GRK4P32298 578 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 CYP2J2P51589 502 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 ZBED6P86452 979 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 KCNH2Q12809 1159 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 PPP2R5AQ15172 486 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 HSDL1Q3SXM5 330 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 TCERG1LQ5VWI1 586 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 TAPT1Q6NXT6 567 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 CYP26C1Q6V0L0 522 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 C12orf56Q8IXR9 622 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 FAM186BQ8IYM0 893 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 TMEM174Q8WUU8 243 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 MAML3Q96JK9 1138 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 TINF2Q9BSI4 451 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 EDEM3Q9BZQ6 932 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 ARHGAP39Q9C0H5 1083 aa11.18□□□□□ -0.62
PCCB-213ENST00000475214 DHX33Q9H6R0 707 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms