RNA–Protein interactions for RNA: ENST00000474933.6

TRO-220, Transcript of trophinin, humanhuman

TSL 4

Gene TRO, Length 299 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-220ENST00000474933 CCND3P30281 292 aaPredicted RBP12.88□□□□□ -0.35
TRO-220ENST00000474933 CDC25BP30305 580 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 PSEN2P49810 448 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 SOX10P56693 466 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 KCNJ12Q14500 433 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 MXD4Q14582 209 aaPredicted RBP12.88□□□□□ -0.35
TRO-220ENST00000474933 MFSD10Q14728 455 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 GRIK4Q16099 956 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 NFIL3Q16649 462 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 ZC2HC1CQ53FD0 456 aaPredicted RBP12.88□□□□□ -0.35
TRO-220ENST00000474933 LRRC55Q6ZSA7 311 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 MAP4K3Q8IVH8 894 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 ZC3H3Q8IXZ2 948 aaKnown RBP12.88□□□□□ -0.35
TRO-220ENST00000474933 SYCP3Q8IZU3 236 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 TMEM161BQ8NDZ6 487 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 ASAP3Q8TDY4 903 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 TRAPPC12Q8WVT3 735 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 PDLIM2Q96JY6 352 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 CNOT6LQ96LI5 555 aaKnown RBP12.88□□□□□ -0.35
TRO-220ENST00000474933 PPP1R9BQ96SB3 815 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 SRRTQ9BXP5 876 aaKnown RBP12.88□□□□□ -0.35
TRO-220ENST00000474933 GBP3Q9H0R5 595 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 WBP1LQ9NX94 342 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 CGNQ9P2M7 1197 aaKnown RBP12.88□□□□□ -0.35
TRO-220ENST00000474933 ARHGAP28Q9P2N2 729 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 LIMA1Q9UHB6 759 aaKnown RBP12.88□□□□□ -0.35
TRO-220ENST00000474933 DDX20Q9UHI6 824 aaKnown RBP12.88□□□□□ -0.35
TRO-220ENST00000474933 TSKSQ9UJT2 592 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 TRIM17Q9Y577 477 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 PHLPP2Q6ZVD8 1323 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 NRCAMQ92823 1304 aa12.88□□□□□ -0.35
TRO-220ENST00000474933 DENND3A2RUS2 1198 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 LRRIQ4A6NIV6 560 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 HAS3O00219 553 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 CETN3O15182 167 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 GNA14O95837 355 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 TPM2P07951 284 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 CST5P28325 142 aaPredicted RBP12.87□□□□□ -0.35
TRO-220ENST00000474933 GRK4P32298 578 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 HOXD13P35453 343 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 SNRPFP62306 86 aaKnown RBP12.87□□□□□ -0.35
TRO-220ENST00000474933 IGBP1P78318 339 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 PURAQ00577 322 aaKnown RBP12.87□□□□□ -0.35
TRO-220ENST00000474933 BEX3Q00994 111 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 CAPSQ13938 189 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 TFDP1Q14186 410 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 KIAA0753Q2KHM9 967 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 HSP90AA4PQ58FG1 418 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 TCP11X2Q5H9J9 407 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 LRRC71Q8N4P6 559 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 KAT2BQ92831 832 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 MTG1Q9BT17 334 aaPredicted RBP12.87□□□□□ -0.35
TRO-220ENST00000474933 KIFC3Q9BVG8 833 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 C2orf40Q9H1Z8 148 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 SUGCTQ9HAC7 445 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 IFNKQ9P0W0 207 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 SUCLA2Q9P2R7 463 aaPredicted RBP12.87□□□□□ -0.35
TRO-220ENST00000474933 ADGRA3Q8IWK6 1321 aa12.87□□□□□ -0.35
TRO-220ENST00000474933 MYADML2A6NDP7 307 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 SLC16A3O15427 465 aaKnown RBP12.86□□□□□ -0.35
TRO-220ENST00000474933 ASAP2O43150 1006 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 ADAMTS4O75173 837 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 PGK1P00558 417 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 NR3C1P04150 777 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 SMIM10L2AP0DMW4 78 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 SMIM10L2BP0DMW5 78 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 NR2F2P24468 414 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 KLRC1P26715 233 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 TMOD1P28289 359 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 CLCN3P51790 818 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 EFNA5P52803 228 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 UBASH3AP57075 661 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 KCNA1Q09470 495 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 STRN3Q13033 797 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 MYBPC2Q14324 1141 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 KRT31Q15323 416 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 FILIP1LQ4L180 1135 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 GNASQ5JWF2 1037 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 EFCAB12Q6NXP0 572 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 MTHFD1LQ6UB35 978 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 IRF2BP1Q8IU81 584 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 ZBTB8OSQ8IWT0 167 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 LINC01465Q8N7H1 131 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 PRPF31Q8WWY3 499 aaKnown RBP12.86□□□□□ -0.35
TRO-220ENST00000474933 MAP7D2Q96T17 732 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 XPO4Q9C0E2 1151 aaKnown RBP12.86□□□□□ -0.35
TRO-220ENST00000474933 AGPAT3Q9NRZ7 376 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 TBX20Q9UMR3 447 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 PTCH2Q9Y6C5 1203 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 DOCK3Q8IZD9 2030 aa12.86□□□□□ -0.35
TRO-220ENST00000474933 A0A1B0GTH6 734 aa12.85□□□□□ -0.35
TRO-220ENST00000474933 TGFB1I1O43294 461 aa12.85□□□□□ -0.35
TRO-220ENST00000474933 GNAT1P11488 350 aa12.85□□□□□ -0.35
TRO-220ENST00000474933 COPB1P53618 953 aaKnown RBP12.85□□□□□ -0.35
TRO-220ENST00000474933 IRX5P78411 483 aaPredicted RBP12.85□□□□□ -0.35
TRO-220ENST00000474933 LAMTOR4Q0VGL1 99 aa12.85□□□□□ -0.35
TRO-220ENST00000474933 MKRN4PQ13434 485 aaPredicted RBP12.85□□□□□ -0.35
TRO-220ENST00000474933 ADAM9Q13443 819 aa12.85□□□□□ -0.35
TRO-220ENST00000474933 DRP2Q13474 957 aa12.85□□□□□ -0.35
TRO-220ENST00000474933 CCDC40Q4G0X9 1142 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms