RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 HCLS1P14317 486 aaPredicted RBP7.99□□□□□ -1.13
GPNMB-209ENST00000474157 S100A1P23297 94 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 BDNFP23560 247 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 CCNCP24863 283 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 ALDH3A1P30838 453 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 KIF5BP33176 963 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 GIPRP48546 466 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 MRPS35P82673 323 aaKnown RBP7.99□□□□□ -1.13
GPNMB-209ENST00000474157 TRIM29Q14134 588 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 TTLL4Q14679 1199 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 WTAPQ15007 396 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 CCDC153Q494R4 210 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 PABPC1LQ4VXU2 614 aaKnown RBP7.99□□□□□ -1.13
GPNMB-209ENST00000474157 ZBTB37Q5TC79 503 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 VPS53Q5VIR6 699 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 IQCEQ6IPM2 695 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 ATF7IPQ6VMQ6 1270 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 GFM2Q969S9 779 aaKnown RBP7.99□□□□□ -1.13
GPNMB-209ENST00000474157 JAKMIP1Q96N16 626 aaKnown RBP7.99□□□□□ -1.13
GPNMB-209ENST00000474157 TRAPPC9Q96Q05 1148 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 GSDMAQ96QA5 445 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 SYNCQ9H7C4 482 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 IFT122Q9HBG6 1241 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 TMEM165Q9HC07 324 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 SLC39A2Q9NP94 309 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 DMAP1Q9NPF5 467 aaPredicted RBP7.99□□□□□ -1.13
GPNMB-209ENST00000474157 SEL1LQ9UBV2 794 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 FBXO9Q9UK97 447 aaPredicted RBP7.99□□□□□ -1.13
GPNMB-209ENST00000474157 L1RE1Q9UN81 338 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 CRYBG1Q9Y4K1 1723 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 N6AMT1Q9Y5N5 214 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 ACTL7BQ9Y614 415 aa7.99□□□□□ -1.13
GPNMB-209ENST00000474157 PHRF1Q9P1Y6 1649 aaKnown RBP7.99□□□□□ -1.13
GPNMB-209ENST00000474157 TRIM64CA6NLI5 447 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 C9orf172C9J069 976 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 LSM1O15116 133 aaKnown RBP7.98□□□□□ -1.13
GPNMB-209ENST00000474157 FANCGO15287 622 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 GLB1P16278 677 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 NTF4P34130 210 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 PREPP48147 710 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 CCNG1P51959 295 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 EVCP57679 992 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 RBL2Q08999 1139 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 ZBTB17Q13105 803 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 BTG3Q14201 252 aaPredicted RBP7.98□□□□□ -1.13
GPNMB-209ENST00000474157 FXNQ16595 210 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 GNPTABQ3T906 1256 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 CFAP157Q5JU67 520 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 SPDYCQ5MJ68 293 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 NCCRP1Q6ZVX7 275 aaPredicted RBP7.98□□□□□ -1.13
GPNMB-209ENST00000474157 TMC6Q7Z403 805 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 LSRQ86X29 649 aaPredicted RBP7.98□□□□□ -1.13
GPNMB-209ENST00000474157 CKAP2LQ8IYA6 745 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 FAM169BQ8N8A8 192 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 C2CD4AQ8NCU7 369 aaPredicted RBP7.98□□□□□ -1.13
GPNMB-209ENST00000474157 MSANTD4Q8NCY6 345 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 CFAP61Q8NHU2 1237 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 KLHDC4Q8TBB5 520 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 CACTINQ8WUQ7 758 aaKnown RBP7.98□□□□□ -1.13
GPNMB-209ENST00000474157 SLC39A3Q9BRY0 314 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 CCDC28BQ9BUN5 200 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 OSBPL10Q9BXB5 764 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 TAOK3Q9H2K8 898 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 PIDD1Q9HB75 910 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 WDR35Q9P2L0 1181 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 CTNNAL1Q9UBT7 734 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 PRKAG3Q9UGI9 489 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 G3BP2Q9UN86 482 aaKnown RBP7.98□□□□□ -1.13
GPNMB-209ENST00000474157 SH3GLB1Q9Y371 365 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 PCNTO95613 3336 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 LRRC37A3O60309 1634 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 LMO7Q8WWI1 1683 aa7.98□□□□□ -1.13
GPNMB-209ENST00000474157 POLR3AO14802 1390 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-209ENST00000474157 TNS2Q63HR2 1409 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 PAPPAQ13219 1627 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 GPR75-ASB3A0A0A6YYF3 556 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 PABPN1LA6NDY0 278 aaKnown RBP7.97□□□□□ -1.13
GPNMB-209ENST00000474157 H3BQF6 201 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 EIF3FO00303 357 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-209ENST00000474157 SMAD7O15105 426 aaKnown RBP7.97□□□□□ -1.13
GPNMB-209ENST00000474157 PARNO95453 639 aaKnown RBP7.97□□□□□ -1.13
GPNMB-209ENST00000474157 GSTA2P09210 222 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 NAT2P11245 290 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 GNAT1P11488 350 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 MAGEA10P43363 369 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-209ENST00000474157 ASPAP45381 313 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 IRAK1P51617 712 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 INHBCP55103 352 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 OXCT1P55809 520 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 NRG1Q02297 640 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-209ENST00000474157 SULT2A1Q06520 285 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 BEND6Q5SZJ8 279 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-209ENST00000474157 ADALQ6DHV7 355 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 ARHGAP27Q6ZUM4 889 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 ANKS3Q6ZW76 656 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 CCAR1Q8IX12 1150 aaKnown RBP7.97□□□□□ -1.13
GPNMB-209ENST00000474157 ARL10Q8N8L6 244 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 RBBP8NLQ8NC74 664 aaPredicted RBP7.97□□□□□ -1.13
GPNMB-209ENST00000474157 FLAD1Q8NFF5 587 aa7.97□□□□□ -1.13
GPNMB-209ENST00000474157 ATP6V0A1Q93050 837 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms