RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 H3BQ06 376 aaPredicted RBP22.24■■□□□ 1.15
TMEM54-204ENST00000474144 MCM7P33993 719 aa22.24■■□□□ 1.15
TMEM54-204ENST00000474144 HYAL1Q12794 435 aa22.24■■□□□ 1.15
TMEM54-204ENST00000474144 SAFBQ15424 915 aaKnown RBP eCLIP22.24■■□□□ 1.15
TMEM54-204ENST00000474144 XKR9Q5GH70 373 aa22.24■■□□□ 1.15
TMEM54-204ENST00000474144 ZNF410Q86VK4 478 aa22.24■■□□□ 1.15
TMEM54-204ENST00000474144 POF1BQ8WVV4 589 aa22.24■■□□□ 1.15
TMEM54-204ENST00000474144 PABPC5Q96DU9 382 aaKnown RBP22.24■■□□□ 1.15
TMEM54-204ENST00000474144 HSD17B14Q9BPX1 270 aa22.24■■□□□ 1.15
TMEM54-204ENST00000474144 JPH2Q9BR39 696 aaPredicted RBP22.24■■□□□ 1.15
TMEM54-204ENST00000474144 IFT122Q9HBG6 1241 aa22.24■■□□□ 1.15
TMEM54-204ENST00000474144 SH2B1Q9NRF2 756 aaPredicted RBP22.24■■□□□ 1.15
TMEM54-204ENST00000474144 BRWD1Q9NSI6 2320 aa22.24■■□□□ 1.15
TMEM54-204ENST00000474144 A0A0U1RQF3 1178 aa22.23■■□□□ 1.15
TMEM54-204ENST00000474144 ATF7P17544 494 aaPredicted RBP22.23■■□□□ 1.15
TMEM54-204ENST00000474144 RFC5P40937 340 aa22.23■■□□□ 1.15
TMEM54-204ENST00000474144 COL19A1Q14993 1142 aa22.23■■□□□ 1.15
TMEM54-204ENST00000474144 CLLU1OSQ5K130 101 aa22.23■■□□□ 1.15
TMEM54-204ENST00000474144 OTUD6AQ7L8S5 288 aa22.23■■□□□ 1.15
TMEM54-204ENST00000474144 ADGRD2Q7Z7M1 963 aa22.23■■□□□ 1.15
TMEM54-204ENST00000474144 ZNF598Q86UK7 904 aaKnown RBP22.23■■□□□ 1.15
TMEM54-204ENST00000474144 COLGALT1Q8NBJ5 622 aa22.23■■□□□ 1.15
TMEM54-204ENST00000474144 NEK9Q8TD19 979 aa22.23■■□□□ 1.15
TMEM54-204ENST00000474144 PRPF31Q8WWY3 499 aaKnown RBP22.23■■□□□ 1.15
TMEM54-204ENST00000474144 TMEM117Q9H0C3 514 aa22.23■■□□□ 1.15
TMEM54-204ENST00000474144 CLDND1Q9NY35 253 aa22.23■■□□□ 1.15
TMEM54-204ENST00000474144 PCDHGC5Q9Y5F6 944 aa22.23■■□□□ 1.15
TMEM54-204ENST00000474144 COL4A3BPQ9Y5P4 624 aa22.23■■□□□ 1.15
TMEM54-204ENST00000474144 POTEMA6NI47 508 aa22.22■■□□□ 1.15
TMEM54-204ENST00000474144 SRGAP2CP0DJJ0 459 aa22.22■■□□□ 1.15
TMEM54-204ENST00000474144 IL9P15248 144 aa22.22■■□□□ 1.15
TMEM54-204ENST00000474144 SFPQP23246 707 aaKnown RBP eCLIP22.22■■□□□ 1.15
TMEM54-204ENST00000474144 EMC2Q15006 297 aa22.22■■□□□ 1.15
TMEM54-204ENST00000474144 FAM184AQ8NB25 1140 aa22.22■■□□□ 1.15
TMEM54-204ENST00000474144 FBXO18Q8NFZ0 1043 aa22.22■■□□□ 1.15
TMEM54-204ENST00000474144 IGFLR1Q9H665 355 aa22.22■■□□□ 1.15
TMEM54-204ENST00000474144 PPME1Q9Y570 386 aa22.22■■□□□ 1.15
TMEM54-204ENST00000474144 PCDHB12Q9Y5F1 795 aa22.22■■□□□ 1.15
TMEM54-204ENST00000474144 TTC28Q96AY4 2481 aa22.22■■□□□ 1.15
TMEM54-204ENST00000474144 LTBRP36941 435 aa22.21■■□□□ 1.15
TMEM54-204ENST00000474144 HMGN5P82970 282 aaKnown RBP22.21■■□□□ 1.15
TMEM54-204ENST00000474144 LAMTOR4Q0VGL1 99 aa22.21■■□□□ 1.15
TMEM54-204ENST00000474144 ZNF174Q15697 407 aa22.21■■□□□ 1.15
TMEM54-204ENST00000474144 LONRF3Q496Y0 759 aa22.21■■□□□ 1.15
TMEM54-204ENST00000474144 PSPC1Q8WXF1 523 aaKnown RBP22.21■■□□□ 1.15
TMEM54-204ENST00000474144 INO80BQ9C086 356 aaPredicted RBP22.21■■□□□ 1.15
TMEM54-204ENST00000474144 FOXP1Q9H334 677 aaPredicted RBP22.21■■□□□ 1.15
TMEM54-204ENST00000474144 MINDY3Q9H8M7 445 aa22.21■■□□□ 1.15
TMEM54-204ENST00000474144 XPNPEP1Q9NQW7 623 aa22.21■■□□□ 1.15
TMEM54-204ENST00000474144 CHST12Q9NRB3 414 aa22.21■■□□□ 1.15
TMEM54-204ENST00000474144 DACT1Q9NYF0 836 aa22.21■■□□□ 1.15
TMEM54-204ENST00000474144 PIN4Q9Y237 131 aaKnown RBP22.21■■□□□ 1.15
TMEM54-204ENST00000474144 LINC01565O15544 149 aa22.2■■□□□ 1.14
TMEM54-204ENST00000474144 HOXA2O43364 376 aa22.2■■□□□ 1.14
TMEM54-204ENST00000474144 FGF18O76093 207 aa22.2■■□□□ 1.14
TMEM54-204ENST00000474144 PBX3P40426 434 aa22.2■■□□□ 1.14
TMEM54-204ENST00000474144 PHKA2P46019 1235 aa22.2■■□□□ 1.14
TMEM54-204ENST00000474144 DLX2Q07687 328 aaPredicted RBP22.2■■□□□ 1.14
TMEM54-204ENST00000474144 CTC1Q2NKJ3 1217 aa22.2■■□□□ 1.14
TMEM54-204ENST00000474144 TWF2Q6IBS0 349 aaKnown RBP22.2■■□□□ 1.14
TMEM54-204ENST00000474144 PTCRAQ6ISU1 281 aaPredicted RBP22.2■■□□□ 1.14
TMEM54-204ENST00000474144 CATSPER4Q7RTX7 472 aa22.2■■□□□ 1.14
TMEM54-204ENST00000474144 FERMT3Q86UX7 667 aa22.2■■□□□ 1.14
TMEM54-204ENST00000474144 EXOC8Q8IYI6 725 aa22.2■■□□□ 1.14
TMEM54-204ENST00000474144 THNSL1Q8IYQ7 743 aa22.2■■□□□ 1.14
TMEM54-204ENST00000474144 ABI1Q8IZP0 508 aa22.2■■□□□ 1.14
TMEM54-204ENST00000474144 HELQQ8TDG4 1101 aa22.2■■□□□ 1.14
TMEM54-204ENST00000474144 LPPQ93052 612 aa22.2■■□□□ 1.14
TMEM54-204ENST00000474144 MTRQ99707 1265 aa22.2■■□□□ 1.14
TMEM54-204ENST00000474144 AAASQ9NRG9 546 aa22.2■■□□□ 1.14
TMEM54-204ENST00000474144 LYPLA2O95372 231 aa22.19■■□□□ 1.14
TMEM54-204ENST00000474144 EOMESO95936 686 aa22.19■■□□□ 1.14
TMEM54-204ENST00000474144 LAG3P18627 525 aa22.19■■□□□ 1.14
TMEM54-204ENST00000474144 TECP42680 631 aa22.19■■□□□ 1.14
TMEM54-204ENST00000474144 RABEP1Q15276 862 aa22.19■■□□□ 1.14
TMEM54-204ENST00000474144 PIGOQ8TEQ8 1089 aa22.19■■□□□ 1.14
TMEM54-204ENST00000474144 GRXCR2A6NFK2 248 aa22.18■■□□□ 1.14
TMEM54-204ENST00000474144 MEIS3P2A8K0S8 358 aa22.18■■□□□ 1.14
TMEM54-204ENST00000474144 CD2BP2O95400 341 aaKnown RBP22.18■■□□□ 1.14
TMEM54-204ENST00000474144 SPATA31C1P0DKV0 1188 aa22.18■■□□□ 1.14
TMEM54-204ENST00000474144 NBR1Q14596 966 aa22.18■■□□□ 1.14
TMEM54-204ENST00000474144 RBM23Q86U06 439 aaKnown RBP22.18■■□□□ 1.14
TMEM54-204ENST00000474144 NOSTRINQ8IVI9 506 aa22.18■■□□□ 1.14
TMEM54-204ENST00000474144 LRRC43Q8N309 656 aa22.18■■□□□ 1.14
TMEM54-204ENST00000474144 RNF149Q8NC42 400 aa22.18■■□□□ 1.14
TMEM54-204ENST00000474144 TCP11Q8WWU5 503 aa22.18■■□□□ 1.14
TMEM54-204ENST00000474144 TRAIPQ9BWF2 469 aa22.18■■□□□ 1.14
TMEM54-204ENST00000474144 CD320Q9NPF0 282 aa22.18■■□□□ 1.14
TMEM54-204ENST00000474144 FAM105AQ9NUU6 356 aa22.18■■□□□ 1.14
TMEM54-204ENST00000474144 NCK2O43639 380 aa22.17■■□□□ 1.14
TMEM54-204ENST00000474144 GAS2O43903 313 aaKnown RBP22.17■■□□□ 1.14
TMEM54-204ENST00000474144 TBX10O75333 385 aa22.17■■□□□ 1.14
TMEM54-204ENST00000474144 MED24O75448 989 aa22.17■■□□□ 1.14
TMEM54-204ENST00000474144 RARRES1P49788 294 aa22.17■■□□□ 1.14
TMEM54-204ENST00000474144 ERVFC1P60507 584 aa22.17■■□□□ 1.14
TMEM54-204ENST00000474144 GNL2Q13823 731 aaKnown RBP22.17■■□□□ 1.14
TMEM54-204ENST00000474144 CLUL1Q15846 466 aa22.17■■□□□ 1.14
TMEM54-204ENST00000474144 TTC38Q5R3I4 469 aa22.17■■□□□ 1.14
TMEM54-204ENST00000474144 KCNT2Q6UVM3 1135 aa22.17■■□□□ 1.14
TMEM54-204ENST00000474144 SRGAP1Q7Z6B7 1085 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms