RNA–Protein interactions for RNA: ENST00000473949.5

ARF1-206, Transcript of ADP ribosylation factor 1, humanhuman

TSL 5

Gene ARF1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-206ENST00000473949 SCRN1Q12765 414 aa23.28■■□□□ 1.32
ARF1-206ENST00000473949 CLLU1OSQ5K130 101 aa23.28■■□□□ 1.32
ARF1-206ENST00000473949 RHPN2Q8IUC4 686 aa23.28■■□□□ 1.32
ARF1-206ENST00000473949 FDXACB1Q9BRP7 624 aaPredicted RBP23.28■■□□□ 1.32
ARF1-206ENST00000473949 SPG21Q9NZD8 308 aa23.28■■□□□ 1.32
ARF1-206ENST00000473949 SUCLA2Q9P2R7 463 aaPredicted RBP23.28■■□□□ 1.32
ARF1-206ENST00000473949 C5orf42Q9H799 3197 aa23.27■■□□□ 1.32
ARF1-206ENST00000473949 MARCH6O60337 910 aa23.27■■□□□ 1.32
ARF1-206ENST00000473949 STBD1O95210 358 aa23.27■■□□□ 1.32
ARF1-206ENST00000473949 PLA2G4FQ68DD2 849 aa23.27■■□□□ 1.32
ARF1-206ENST00000473949 LLGL2Q6P1M3 1020 aa23.27■■□□□ 1.32
ARF1-206ENST00000473949 TMC7Q7Z402 723 aa23.27■■□□□ 1.32
ARF1-206ENST00000473949 VN1R2Q8NFZ6 395 aa23.27■■□□□ 1.32
ARF1-206ENST00000473949 NLRP4Q96MN2 994 aa23.27■■□□□ 1.32
ARF1-206ENST00000473949 CEP89Q96ST8 783 aa23.27■■□□□ 1.32
ARF1-206ENST00000473949 PHF20Q9BVI0 1012 aa23.27■■□□□ 1.32
ARF1-206ENST00000473949 INO80BQ9C086 356 aaPredicted RBP23.27■■□□□ 1.32
ARF1-206ENST00000473949 CHST12Q9NRB3 414 aa23.27■■□□□ 1.32
ARF1-206ENST00000473949 IGKV6-21A0A0C4DH24 114 aa23.26■■□□□ 1.31
ARF1-206ENST00000473949 CA8P35219 290 aa23.26■■□□□ 1.31
ARF1-206ENST00000473949 HERC4Q5GLZ8 1057 aaPredicted RBP23.26■■□□□ 1.31
ARF1-206ENST00000473949 TWF2Q6IBS0 349 aaKnown RBP23.26■■□□□ 1.31
ARF1-206ENST00000473949 NEK8Q86SG6 692 aa23.26■■□□□ 1.31
ARF1-206ENST00000473949 ZNF410Q86VK4 478 aa23.26■■□□□ 1.31
ARF1-206ENST00000473949 FAM20AQ96MK3 541 aa23.26■■□□□ 1.31
ARF1-206ENST00000473949 JPH2Q9BR39 696 aaPredicted RBP23.26■■□□□ 1.31
ARF1-206ENST00000473949 MRPL9Q9BYD2 267 aaKnown RBP23.26■■□□□ 1.31
ARF1-206ENST00000473949 NGRNQ9NPE2 291 aaKnown RBP23.26■■□□□ 1.31
ARF1-206ENST00000473949 PIN4Q9Y237 131 aaKnown RBP23.26■■□□□ 1.31
ARF1-206ENST00000473949 HIDE1A8MVS5 230 aa23.25■■□□□ 1.31
ARF1-206ENST00000473949 EML1O00423 815 aa23.25■■□□□ 1.31
ARF1-206ENST00000473949 CCNT1O60563 726 aaKnown RBP23.25■■□□□ 1.31
ARF1-206ENST00000473949 DKC1O60832 514 aaKnown RBP eCLIP23.25■■□□□ 1.31
ARF1-206ENST00000473949 DTNBO60941 627 aa23.25■■□□□ 1.31
ARF1-206ENST00000473949 MAFO75444 373 aaPredicted RBP23.25■■□□□ 1.31
ARF1-206ENST00000473949 GCFC2P16383 781 aaKnown RBP23.25■■□□□ 1.31
ARF1-206ENST00000473949 ATF7P17544 494 aaPredicted RBP23.25■■□□□ 1.31
ARF1-206ENST00000473949 TECP42680 631 aa23.25■■□□□ 1.31
ARF1-206ENST00000473949 QARSP47897 775 aaKnown RBP23.25■■□□□ 1.31
ARF1-206ENST00000473949 LONRF3Q496Y0 759 aa23.25■■□□□ 1.31
ARF1-206ENST00000473949 PIK3AP1Q6ZUJ8 805 aa23.25■■□□□ 1.31
ARF1-206ENST00000473949 ANO5Q75V66 913 aa23.25■■□□□ 1.31
ARF1-206ENST00000473949 ZNF598Q86UK7 904 aaKnown RBP23.25■■□□□ 1.31
ARF1-206ENST00000473949 RPGRIP1Q96KN7 1286 aa23.25■■□□□ 1.31
ARF1-206ENST00000473949 PHF7Q9BWX1 381 aaPredicted RBP23.25■■□□□ 1.31
ARF1-206ENST00000473949 PHKA2P46019 1235 aa23.24■■□□□ 1.31
ARF1-206ENST00000473949 ALDH7A1P49419 539 aaKnown RBP23.24■■□□□ 1.31
ARF1-206ENST00000473949 PPP2R5CQ13362 524 aa23.24■■□□□ 1.31
ARF1-206ENST00000473949 PPP4R3AQ6IN85 833 aa23.24■■□□□ 1.31
ARF1-206ENST00000473949 CATSPER4Q7RTX7 472 aa23.24■■□□□ 1.31
ARF1-206ENST00000473949 KSR1Q8IVT5 923 aa23.24■■□□□ 1.31
ARF1-206ENST00000473949 APOL5Q9BWW9 433 aa23.24■■□□□ 1.31
ARF1-206ENST00000473949 CYP26B1Q9NR63 512 aa23.24■■□□□ 1.31
ARF1-206ENST00000473949 GJB4Q9NTQ9 266 aa23.24■■□□□ 1.31
ARF1-206ENST00000473949 TPCN1Q9ULQ1 816 aa23.24■■□□□ 1.31
ARF1-206ENST00000473949 STK36Q9NRP7 1315 aa23.24■■□□□ 1.31
ARF1-206ENST00000473949 LOC730098B7Z3J9 87 aa23.23■■□□□ 1.31
ARF1-206ENST00000473949 NT5C1B-RDH14C9J2C7 533 aa23.23■■□□□ 1.31
ARF1-206ENST00000473949 PFKFB2O60825 505 aa23.23■■□□□ 1.31
ARF1-206ENST00000473949 SKIP12755 728 aa23.23■■□□□ 1.31
ARF1-206ENST00000473949 NPEPPSP55786 919 aa23.23■■□□□ 1.31
ARF1-206ENST00000473949 BCAR1P56945 870 aa23.23■■□□□ 1.31
ARF1-206ENST00000473949 SMC1AQ14683 1233 aaKnown RBP23.23■■□□□ 1.31
ARF1-206ENST00000473949 HFE2Q6ZVN8 426 aa23.23■■□□□ 1.31
ARF1-206ENST00000473949 SLC39A11Q8N1S5 342 aa23.23■■□□□ 1.31
ARF1-206ENST00000473949 OXER1Q8TDS5 423 aa23.23■■□□□ 1.31
ARF1-206ENST00000473949 SLC7A3Q8WY07 619 aa23.23■■□□□ 1.31
ARF1-206ENST00000473949 LPPQ93052 612 aa23.23■■□□□ 1.31
ARF1-206ENST00000473949 CEP170P1Q96L14 293 aa23.23■■□□□ 1.31
ARF1-206ENST00000473949 NAP1L4Q99733 375 aaKnown RBP23.23■■□□□ 1.31
ARF1-206ENST00000473949 KCNMB3Q9NPA1 279 aa23.23■■□□□ 1.31
ARF1-206ENST00000473949 VAV3Q9UKW4 847 aa23.23■■□□□ 1.31
ARF1-206ENST00000473949 ZC3H11AO75152 810 aaKnown RBP eCLIP23.22■■□□□ 1.31
ARF1-206ENST00000473949 P4HBP07237 508 aaKnown RBP23.22■■□□□ 1.31
ARF1-206ENST00000473949 POLGP54098 1239 aaPredicted RBP23.22■■□□□ 1.31
ARF1-206ENST00000473949 BMS1Q14692 1282 aaKnown RBP23.22■■□□□ 1.31
ARF1-206ENST00000473949 ANKRD54Q6NXT1 300 aa23.22■■□□□ 1.31
ARF1-206ENST00000473949 EDAQ92838 391 aa23.22■■□□□ 1.31
ARF1-206ENST00000473949 TMEM169Q96HH4 297 aa23.22■■□□□ 1.31
ARF1-206ENST00000473949 ORC3Q9UBD5 711 aaPredicted RBP23.22■■□□□ 1.31
ARF1-206ENST00000473949 INPP5FQ9Y2H2 1132 aa23.22■■□□□ 1.31
ARF1-206ENST00000473949 HOXD11P31277 338 aaPredicted RBP23.21■■□□□ 1.31
ARF1-206ENST00000473949 ANKRD1Q15327 319 aa23.21■■□□□ 1.31
ARF1-206ENST00000473949 NCAPH2Q6IBW4 605 aa23.21■■□□□ 1.31
ARF1-206ENST00000473949 GLB1LQ6UWU2 654 aa23.21■■□□□ 1.31
ARF1-206ENST00000473949 TMEM184AQ6ZMB5 413 aa23.21■■□□□ 1.31
ARF1-206ENST00000473949 EXOC8Q8IYI6 725 aa23.21■■□□□ 1.31
ARF1-206ENST00000473949 TMEM87AQ8NBN3 555 aa23.21■■□□□ 1.31
ARF1-206ENST00000473949 SUSD6Q92537 303 aa23.21■■□□□ 1.31
ARF1-206ENST00000473949 WASF1Q92558 559 aa23.21■■□□□ 1.31
ARF1-206ENST00000473949 BMP2KQ9NSY1 1161 aaPredicted RBP23.21■■□□□ 1.31
ARF1-206ENST00000473949 FAM105AQ9NUU6 356 aa23.21■■□□□ 1.31
ARF1-206ENST00000473949 COL4A3BPQ9Y5P4 624 aa23.21■■□□□ 1.31
ARF1-206ENST00000473949 BAG4O95429 457 aaKnown RBP23.2■■□□□ 1.3
ARF1-206ENST00000473949 RAB27AP51159 221 aa23.2■■□□□ 1.3
ARF1-206ENST00000473949 RNASELQ05823 741 aaKnown RBP23.2■■□□□ 1.3
ARF1-206ENST00000473949 KCNC3Q14003 757 aa23.2■■□□□ 1.3
ARF1-206ENST00000473949 CBX2Q14781 532 aaPredicted RBP23.2■■□□□ 1.3
ARF1-206ENST00000473949 POTEDQ86YR6 584 aa23.2■■□□□ 1.3
ARF1-206ENST00000473949 PSPC1Q8WXF1 523 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms