RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SP5Q6BEB4 398 aaPredicted RBP3.43□□□□□ -1.86
CCDC39-203ENST00000473854 OSTM1Q86WC4 334 aa3.43□□□□□ -1.86
CCDC39-203ENST00000473854 BCL6BQ8N143 479 aaPredicted RBP3.43□□□□□ -1.86
CCDC39-203ENST00000473854 Q8N9P0 234 aaPredicted RBP3.43□□□□□ -1.86
CCDC39-203ENST00000473854 SIMC1Q8NDZ2 872 aa3.43□□□□□ -1.86
CCDC39-203ENST00000473854 LINC00476Q8WZB0 136 aa3.43□□□□□ -1.86
CCDC39-203ENST00000473854 E2F7Q96AV8 911 aa3.43□□□□□ -1.86
CCDC39-203ENST00000473854 GBP4Q96PP9 640 aa3.43□□□□□ -1.86
CCDC39-203ENST00000473854 DCLRE1CQ96SD1 692 aaKnown RBP3.43□□□□□ -1.86
CCDC39-203ENST00000473854 LRFN3Q9BTN0 628 aa3.43□□□□□ -1.86
CCDC39-203ENST00000473854 SLC29A3Q9BZD2 475 aa3.43□□□□□ -1.86
CCDC39-203ENST00000473854 WDR11Q9BZH6 1224 aa3.43□□□□□ -1.86
CCDC39-203ENST00000473854 KCNH6Q9H252 994 aa3.43□□□□□ -1.86
CCDC39-203ENST00000473854 KCNH7Q9NS40 1196 aa3.43□□□□□ -1.86
CCDC39-203ENST00000473854 PRKAG3Q9UGI9 489 aa3.43□□□□□ -1.86
CCDC39-203ENST00000473854 TRAV20A0A0B4J274 112 aa3.42□□□□□ -1.86
CCDC39-203ENST00000473854 ZNF561-AS1K7EIQ3 104 aa3.42□□□□□ -1.86
CCDC39-203ENST00000473854 DAPK3O43293 454 aa3.42□□□□□ -1.86
CCDC39-203ENST00000473854 TOX4O94842 621 aa3.42□□□□□ -1.86
CCDC39-203ENST00000473854 GJB6O95452 261 aa3.42□□□□□ -1.86
CCDC39-203ENST00000473854 SSBP05455 408 aaKnown RBP eCLIP3.42□□□□□ -1.86
CCDC39-203ENST00000473854 SEC24CP53992 1094 aa3.42□□□□□ -1.86
CCDC39-203ENST00000473854 GRASPQ7Z6J2 395 aaPredicted RBP3.42□□□□□ -1.86
CCDC39-203ENST00000473854 METTL16Q86W50 562 aaKnown RBP3.42□□□□□ -1.86
CCDC39-203ENST00000473854 CMTM4Q8IZR5 234 aa3.42□□□□□ -1.86
CCDC39-203ENST00000473854 FAM98AQ8NCA5 519 aaKnown RBP3.42□□□□□ -1.86
CCDC39-203ENST00000473854 PLA2G15Q8NCC3 412 aa3.42□□□□□ -1.86
CCDC39-203ENST00000473854 GLB1L3Q8NCI6 653 aaPredicted RBP3.42□□□□□ -1.86
CCDC39-203ENST00000473854 SLC7A14Q8TBB6 771 aa3.42□□□□□ -1.86
CCDC39-203ENST00000473854 OSBP2Q969R2 916 aa3.42□□□□□ -1.86
CCDC39-203ENST00000473854 PDCD2LQ9BRP1 358 aa3.42□□□□□ -1.86
CCDC39-203ENST00000473854 C1QTNF7Q9BXJ2 289 aa3.42□□□□□ -1.86
CCDC39-203ENST00000473854 C14orf93Q9H972 538 aaKnown RBP3.42□□□□□ -1.86
CCDC39-203ENST00000473854 KMT5AQ9NQR1 393 aa3.42□□□□□ -1.86
CCDC39-203ENST00000473854 TLK1Q9UKI8 766 aa3.42□□□□□ -1.86
CCDC39-203ENST00000473854 INPP5FQ9Y2H2 1132 aa3.42□□□□□ -1.86
CCDC39-203ENST00000473854 ARHGEF17Q96PE2 2063 aaPredicted RBP3.42□□□□□ -1.86
CCDC39-203ENST00000473854 DNAJC9-AS1A6NH13 148 aa3.41□□□□□ -1.86
CCDC39-203ENST00000473854 GOLGA6L22H0YM25 854 aa3.41□□□□□ -1.86
CCDC39-203ENST00000473854 NRP1O14786 923 aa3.41□□□□□ -1.86
CCDC39-203ENST00000473854 MTSS1O43312 755 aa3.41□□□□□ -1.86
CCDC39-203ENST00000473854 PYGMP11217 842 aa3.41□□□□□ -1.86
CCDC39-203ENST00000473854 POU3F3P20264 500 aaPredicted RBP3.41□□□□□ -1.86
CCDC39-203ENST00000473854 SDHAP31040 664 aa3.41□□□□□ -1.86
CCDC39-203ENST00000473854 BMPR1AP36894 532 aa3.41□□□□□ -1.86
CCDC39-203ENST00000473854 JAM2P57087 298 aa3.41□□□□□ -1.86
CCDC39-203ENST00000473854 LACTBP83111 547 aaPredicted RBP3.41□□□□□ -1.86
CCDC39-203ENST00000473854 ABHD17BQ5VST6 288 aa3.41□□□□□ -1.86
CCDC39-203ENST00000473854 C1QL2Q7Z5L3 287 aa3.41□□□□□ -1.86
CCDC39-203ENST00000473854 CMTR2Q8IYT2 770 aaKnown RBP3.41□□□□□ -1.86
CCDC39-203ENST00000473854 LRRC47Q8N1G4 583 aaKnown RBP3.41□□□□□ -1.86
CCDC39-203ENST00000473854 OR5AN1Q8NGI8 311 aa3.41□□□□□ -1.86
CCDC39-203ENST00000473854 FOXB1Q99853 325 aa3.41□□□□□ -1.86
CCDC39-203ENST00000473854 DUSP26Q9BV47 211 aa3.41□□□□□ -1.86
CCDC39-203ENST00000473854 CLCA2Q9UQC9 943 aa3.41□□□□□ -1.86
CCDC39-203ENST00000473854 EPN1Q9Y6I3 576 aaPredicted RBP3.41□□□□□ -1.86
CCDC39-203ENST00000473854 HLA-DOAP06340 250 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 PDIA4P13667 645 aaKnown RBP3.4□□□□□ -1.87
CCDC39-203ENST00000473854 ATF4P18848 351 aaPredicted RBP3.4□□□□□ -1.87
CCDC39-203ENST00000473854 VAMP1P23763 118 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 ZFP36P26651 326 aaKnown RBP3.4□□□□□ -1.87
CCDC39-203ENST00000473854 MXRA7P84157 204 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 GUCY1B3Q02153 619 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 ALDH6A1Q02252 535 aaKnown RBP3.4□□□□□ -1.87
CCDC39-203ENST00000473854 ACAP1Q15027 740 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 LRP10Q7Z4F1 713 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 CLEC14AQ86T13 490 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 CXorf67Q86X51 503 aaPredicted RBP3.4□□□□□ -1.87
CCDC39-203ENST00000473854 VPS37DQ86XT2 251 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 NT5DC4Q86YG4 428 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 PLXDC1Q8IUK5 500 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 SPATA3Q8NHX4 192 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 PCDH19Q8TAB3 1148 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 NKD2Q969F2 451 aaPredicted RBP3.4□□□□□ -1.87
CCDC39-203ENST00000473854 WDR92Q96MX6 357 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 ANKFY1Q9P2R3 1169 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 NCDNQ9UBB6 729 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 CBLCQ9ULV8 474 aa3.4□□□□□ -1.87
CCDC39-203ENST00000473854 PIPSLA2A3N6 862 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 CCDC66A2RUB6 948 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 DIRC3C9JPN6 131 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 ARVCFO00192 962 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 MAFGO15525 162 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 LPXNO60711 386 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 HIP1RO75146 1068 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 ESRRBO95718 433 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 CBSLP0DN79 551 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 HK1P19367 917 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 CBSP35520 551 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 ABCG1P45844 678 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 ZNF81P51508 661 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 GUCY1A3Q02108 690 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 ROM1Q03395 351 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 MPP3Q13368 585 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 ARMC6Q6NXE6 501 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 GDF7Q7Z4P5 450 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 PTPRN2Q92932 1015 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 NDC1Q9BTX1 674 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 TGIF2Q9GZN2 237 aa3.39□□□□□ -1.87
CCDC39-203ENST00000473854 SMURF1Q9HCE7 757 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms