RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 PLA2G4FQ68DD2 849 aa10.09□□□□□ -0.79
SMG5-203ENST00000473643 CNKSR3Q6P9H4 555 aa10.09□□□□□ -0.79
SMG5-203ENST00000473643 GPBP1Q86WP2 473 aa10.09□□□□□ -0.79
SMG5-203ENST00000473643 DDX12PQ92771 950 aa10.09□□□□□ -0.79
SMG5-203ENST00000473643 DNAJC19Q96DA6 116 aa10.09□□□□□ -0.79
SMG5-203ENST00000473643 JPH2Q9BR39 696 aaPredicted RBP10.09□□□□□ -0.79
SMG5-203ENST00000473643 RUSC1Q9BVN2 902 aa10.09□□□□□ -0.79
SMG5-203ENST00000473643 NUP62CLQ9H1M0 184 aa10.09□□□□□ -0.79
SMG5-203ENST00000473643 TMEM63CQ9P1W3 806 aa10.09□□□□□ -0.79
SMG5-203ENST00000473643 TRPC6Q9Y210 931 aa10.09□□□□□ -0.79
SMG5-203ENST00000473643 YBX2Q9Y2T7 364 aaKnown RBP10.09□□□□□ -0.79
SMG5-203ENST00000473643 ABHD14A-ACY1A0A1B0GW23 586 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 FRMD3A2A2Y4 597 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 MBLAC1A4D2B0 266 aaPredicted RBP10.08□□□□□ -0.8
SMG5-203ENST00000473643 GAS2O43903 313 aaKnown RBP10.08□□□□□ -0.8
SMG5-203ENST00000473643 C22orf31O95567 290 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 SSBP05455 408 aaKnown RBP eCLIP10.08□□□□□ -0.8
SMG5-203ENST00000473643 MYOGP15173 224 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 AFMP43652 599 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 ZNF131P52739 623 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 RABGGTBP53611 331 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 PPFIA1Q13136 1202 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 MKRN4PQ13434 485 aaPredicted RBP10.08□□□□□ -0.8
SMG5-203ENST00000473643 CUL4BQ13620 913 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 DHX8Q14562 1220 aaKnown RBP10.08□□□□□ -0.8
SMG5-203ENST00000473643 GRIK4Q16099 956 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 TCTN1Q2MV58 587 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 MTERF2Q49AM1 385 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 PLEKHG4Q58EX7 1191 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 TAF2Q6P1X5 1199 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 MTHFD1LQ6UB35 978 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 HERC6Q8IVU3 1022 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 LINC01465Q8N7H1 131 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 MCPH1Q8NEM0 835 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 MYLIPQ8WY64 445 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 STAMQ92783 540 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 SYAP1Q96A49 352 aaPredicted RBP10.08□□□□□ -0.8
SMG5-203ENST00000473643 GSDMAQ96QA5 445 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 SLC9A7Q96T83 725 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 SH2D3AQ9BRG2 576 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 SLC28A3Q9HAS3 691 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 XPNPEP1Q9NQW7 623 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 TUBE1Q9UJT0 475 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 ODF2LQ9ULJ1 636 aa10.08□□□□□ -0.8
SMG5-203ENST00000473643 DOCK5Q9H7D0 1870 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 KLRC4O43908 158 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 USO1O60763 962 aaKnown RBP10.07□□□□□ -0.8
SMG5-203ENST00000473643 EFCAB14O75071 495 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 LETM1O95202 739 aaPredicted RBP10.07□□□□□ -0.8
SMG5-203ENST00000473643 SMC2O95347 1197 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 PRR29P0C7W0 189 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 KLRC1P26715 233 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 ARL2P36404 184 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 WDR5P61964 334 aaKnown RBP10.07□□□□□ -0.8
SMG5-203ENST00000473643 EHHADHQ08426 723 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 TBC1D8BQ0IIM8 1120 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 MAPK7Q13164 816 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 PNOCQ13519 176 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 IKBKEQ14164 716 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 KCNB1Q14721 858 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 CAMK4Q16566 473 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 IER5Q5VY09 327 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 CAVIN1Q6NZI2 390 aaKnown RBP10.07□□□□□ -0.8
SMG5-203ENST00000473643 UNC13DQ70J99 1090 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 TRMT1LQ7Z2T5 733 aaKnown RBP10.07□□□□□ -0.8
SMG5-203ENST00000473643 GRAMD1CQ8IYS0 662 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 DAW1Q8N136 415 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 DBF4BQ8NFT6 615 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 SLC7A3Q8WY07 619 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 KIFAP3Q92845 792 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 KCNN1Q92952 543 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 CCDC43Q96MW1 224 aaKnown RBP10.07□□□□□ -0.8
SMG5-203ENST00000473643 REEP2Q9BRK0 252 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 NTPCRQ9BSD7 190 aaKnown RBP10.07□□□□□ -0.8
SMG5-203ENST00000473643 OSBPL7Q9BZF2 842 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 BLZF1Q9H2G9 400 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 NKX2-4Q9H2Z4 354 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 C17orf75Q9HAS0 396 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 ATP6V0A4Q9HBG4 840 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 KCNG1Q9UIX4 513 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 PCDHA5Q9Y5H7 936 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 PCDHA2Q9Y5H9 948 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 TET1Q8NFU7 2136 aa10.07□□□□□ -0.8
SMG5-203ENST00000473643 SMIM35A0A1B0GVV1 85 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 RHOBTB3O94955 611 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 CHRNA1P02708 482 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 RPN1P04843 607 aaKnown RBP10.06□□□□□ -0.8
SMG5-203ENST00000473643 FOSL2P15408 326 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 GAP43P17677 238 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 CASP1P29466 404 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 POLGP54098 1239 aaPredicted RBP10.06□□□□□ -0.8
SMG5-203ENST00000473643 EMC2Q15006 297 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 RUFY4Q6ZNE9 571 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 DYMQ7RTS9 669 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 CCDC65Q8IXS2 484 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 ZNF710Q8N1W2 664 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 SLC17A8Q8NDX2 589 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 TRAPPC12Q8WVT3 735 aa10.06□□□□□ -0.8
SMG5-203ENST00000473643 TCP11Q8WWU5 503 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms