RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 MAEAQ7L5Y9 396 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 SLC30A5Q8TAD4 765 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 FIZ1Q96SL8 496 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 HSD17B14Q9BPX1 270 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 YY1AP1Q9H869 796 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 FAM114A2Q9NRY5 505 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 PRR12Q9ULL5 1215 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 F8VZ95 297 aa22.89■■□□□ 1.26
COL18A1-207ENST00000473212 BMP3P12645 472 aa22.89■■□□□ 1.26
COL18A1-207ENST00000473212 POU5F1Q01860 360 aaKnown RBP22.89■■□□□ 1.26
COL18A1-207ENST00000473212 ZNF211Q13398 564 aaPredicted RBP22.89■■□□□ 1.26
COL18A1-207ENST00000473212 C1orf186Q6ZWK4 172 aa22.89■■□□□ 1.26
COL18A1-207ENST00000473212 RAPGEF5Q92565 580 aa22.89■■□□□ 1.26
COL18A1-207ENST00000473212 DNAJC12Q9UKB3 198 aa22.89■■□□□ 1.26
COL18A1-207ENST00000473212 ATP8A1Q9Y2Q0 1164 aa22.89■■□□□ 1.26
COL18A1-207ENST00000473212 CIITAP33076 1130 aa22.89■■□□□ 1.25
COL18A1-207ENST00000473212 CCDC174Q6PII3 467 aa22.89■■□□□ 1.25
COL18A1-207ENST00000473212 CCDC121Q6ZUS5 278 aa22.89■■□□□ 1.25
COL18A1-207ENST00000473212 OTOP1Q7RTM1 612 aa22.89■■□□□ 1.25
COL18A1-207ENST00000473212 SEPT11Q9NVA2 429 aaKnown RBP22.89■■□□□ 1.25
COL18A1-207ENST00000473212 UTRNP46939 3433 aa22.89■■□□□ 1.25
COL18A1-207ENST00000473212 GTPBP10A4D1E9 387 aaKnown RBP22.88■■□□□ 1.25
COL18A1-207ENST00000473212 SOX5P35711 763 aa22.88■■□□□ 1.25
COL18A1-207ENST00000473212 TMEM179Q6ZVK1 233 aa22.88■■□□□ 1.25
COL18A1-207ENST00000473212 ACER1Q8TDN7 264 aa22.88■■□□□ 1.25
COL18A1-207ENST00000473212 ZNF622Q969S3 477 aaKnown RBP eCLIP22.88■■□□□ 1.25
COL18A1-207ENST00000473212 TULP1O00294 542 aaPredicted RBP22.88■■□□□ 1.25
COL18A1-207ENST00000473212 FMO5P49326 533 aa22.88■■□□□ 1.25
COL18A1-207ENST00000473212 IFFO1Q0D2I5 559 aa22.88■■□□□ 1.25
COL18A1-207ENST00000473212 CHADLQ6NUI6 762 aa22.88■■□□□ 1.25
COL18A1-207ENST00000473212 ATP8B4Q8TF62 1192 aa22.88■■□□□ 1.25
COL18A1-207ENST00000473212 ERVK-5Q9HDB9 667 aa22.88■■□□□ 1.25
COL18A1-207ENST00000473212 DDX3YO15523 660 aaKnown RBP22.87■■□□□ 1.25
COL18A1-207ENST00000473212 LRCH2Q5VUJ6 765 aa22.87■■□□□ 1.25
COL18A1-207ENST00000473212 RFFLQ8WZ73 363 aa22.87■■□□□ 1.25
COL18A1-207ENST00000473212 FMO2Q99518 471 aa22.87■■□□□ 1.25
COL18A1-207ENST00000473212 SH2D3AQ9BRG2 576 aa22.87■■□□□ 1.25
COL18A1-207ENST00000473212 POLR3CQ9BUI4 534 aaPredicted RBP22.87■■□□□ 1.25
COL18A1-207ENST00000473212 PKD2L1Q9P0L9 805 aa22.87■■□□□ 1.25
COL18A1-207ENST00000473212 MMP14P50281 582 aa22.87■■□□□ 1.25
COL18A1-207ENST00000473212 SETQ01105 290 aaPredicted RBP22.87■■□□□ 1.25
COL18A1-207ENST00000473212 TBC1D10BQ4KMP7 808 aaPredicted RBP22.87■■□□□ 1.25
COL18A1-207ENST00000473212 MEX3CQ5U5Q3 659 aaKnown RBP22.87■■□□□ 1.25
COL18A1-207ENST00000473212 MSL1Q68DK7 614 aa22.87■■□□□ 1.25
COL18A1-207ENST00000473212 SEC16BQ96JE7 1060 aa22.87■■□□□ 1.25
COL18A1-207ENST00000473212 OLFML3Q9NRN5 406 aa22.87■■□□□ 1.25
COL18A1-207ENST00000473212 COG5Q9UP83 839 aa22.87■■□□□ 1.25
COL18A1-207ENST00000473212 LMNB1P20700 586 aa22.86■■□□□ 1.25
COL18A1-207ENST00000473212 IRX3P78415 501 aaPredicted RBP22.86■■□□□ 1.25
COL18A1-207ENST00000473212 ZYXQ15942 572 aaKnown RBP22.86■■□□□ 1.25
COL18A1-207ENST00000473212 SPRED3Q2MJR0 410 aa22.86■■□□□ 1.25
COL18A1-207ENST00000473212 DACT2Q5SW24 774 aa22.86■■□□□ 1.25
COL18A1-207ENST00000473212 ZSWIM2Q8NEG5 633 aa22.86■■□□□ 1.25
COL18A1-207ENST00000473212 CTNNBL1Q8WYA6 563 aaPredicted RBP22.86■■□□□ 1.25
COL18A1-207ENST00000473212 THAP2Q9H0W7 228 aa22.86■■□□□ 1.25
COL18A1-207ENST00000473212 TTC7AQ9ULT0 858 aaPredicted RBP22.86■■□□□ 1.25
COL18A1-207ENST00000473212 NCANO14594 1321 aa22.86■■□□□ 1.25
COL18A1-207ENST00000473212 DDX39AO00148 427 aaKnown RBP22.86■■□□□ 1.25
COL18A1-207ENST00000473212 FOSP01100 380 aaPredicted RBP22.86■■□□□ 1.25
COL18A1-207ENST00000473212 TMEM253P0C7T8 217 aa22.86■■□□□ 1.25
COL18A1-207ENST00000473212 PSMC2P35998 433 aaKnown RBP22.86■■□□□ 1.25
COL18A1-207ENST00000473212 DLG4P78352 724 aa22.86■■□□□ 1.25
COL18A1-207ENST00000473212 PPATQ06203 517 aa22.86■■□□□ 1.25
COL18A1-207ENST00000473212 TRMT1LQ7Z2T5 733 aaKnown RBP22.86■■□□□ 1.25
COL18A1-207ENST00000473212 C3orf20Q8ND61 904 aa22.86■■□□□ 1.25
COL18A1-207ENST00000473212 MDM1Q8TC05 714 aa22.86■■□□□ 1.25
COL18A1-207ENST00000473212 PSMD1Q99460 953 aa22.86■■□□□ 1.25
COL18A1-207ENST00000473212 STK33Q9BYT3 514 aa22.86■■□□□ 1.25
COL18A1-207ENST00000473212 OSBPL7Q9BZF2 842 aa22.86■■□□□ 1.25
COL18A1-207ENST00000473212 TMOD4Q9NZQ9 345 aa22.86■■□□□ 1.25
COL18A1-207ENST00000473212 GOLGA6L7A0A1B0GV03 622 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 PSMD10O75832 226 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 ARP10275 920 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 NPR1P16066 1061 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 SMTNP53814 917 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 GMCL1P1Q8NEA9 526 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 SLC20A1Q8WUM9 679 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 GLG1Q92896 1179 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 GMCL1Q96IK5 515 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 IDI2Q9BXS1 227 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 PARVGQ9HBI0 331 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 PHF20L1A8MW92 1017 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 PPFIA2O75334 1257 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 PAEPP09466 180 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 PTENP60484 403 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 DR1Q01658 176 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 PLCB4Q15147 1175 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 UBAP2Q5T6F2 1119 aaKnown RBP22.85■■□□□ 1.25
COL18A1-207ENST00000473212 PHLDB3Q6NSJ2 640 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 HOOK2Q96ED9 719 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 CCDC114Q96M63 670 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 RAB17Q9H0T7 212 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 AGPAT3Q9NRZ7 376 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 KLC4Q9NSK0 619 aa22.85■■□□□ 1.25
COL18A1-207ENST00000473212 DRP2Q13474 957 aa22.84■■□□□ 1.25
COL18A1-207ENST00000473212 BYSLQ13895 437 aaKnown RBP22.84■■□□□ 1.25
COL18A1-207ENST00000473212 ZNF720Q7Z2F6 126 aa22.84■■□□□ 1.25
COL18A1-207ENST00000473212 ALG3Q92685 438 aa22.84■■□□□ 1.25
COL18A1-207ENST00000473212 PRMT6Q96LA8 375 aaPredicted RBP22.84■■□□□ 1.25
COL18A1-207ENST00000473212 SYT11Q9BT88 431 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms