RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 A0A087WZ62 844 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 MBTPS2O43462 519 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 GPR37L1O60883 481 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 LARGE1O95461 756 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 SSTR3P32745 418 aaPredicted RBP17.14■□□□□ 0.33
VTI1A-203ENST00000472892 KRT2P35908 639 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 NRIP1P48552 1158 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 NEK4P51957 841 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 NPEPPSP55786 919 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 ERVFC1P60507 584 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 ZP2Q05996 745 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 SPIRE1Q08AE8 756 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 NR5A1Q13285 461 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 CLLU1OSQ5K130 101 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 PDE12Q6L8Q7 609 aaKnown RBP17.14■□□□□ 0.33
VTI1A-203ENST00000472892 ADHFE1Q8IWW8 467 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 C4orf19Q8IY42 314 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 THNSL1Q8IYQ7 743 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 ZNF579Q8NAF0 562 aaKnown RBP17.14■□□□□ 0.33
VTI1A-203ENST00000472892 MICAL1Q8TDZ2 1067 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 MSLNLQ96KJ4 702 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 FDXACB1Q9BRP7 624 aaPredicted RBP17.14■□□□□ 0.33
VTI1A-203ENST00000472892 LRFN3Q9BTN0 628 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 INO80BQ9C086 356 aaPredicted RBP17.14■□□□□ 0.33
VTI1A-203ENST00000472892 C11orf16Q9NQ32 467 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 TLR9Q9NR96 1032 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 WRAP73Q9P2S5 460 aaPredicted RBP17.14■□□□□ 0.33
VTI1A-203ENST00000472892 CD207Q9UJ71 328 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 LZTS1Q9Y250 596 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 PPME1Q9Y570 386 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 PCDHGC5Q9Y5F6 944 aa17.14■□□□□ 0.33
VTI1A-203ENST00000472892 FAM205CA6NFA0 338 aa17.13■□□□□ 0.33
VTI1A-203ENST00000472892 FSCN2O14926 492 aa17.13■□□□□ 0.33
VTI1A-203ENST00000472892 MARCH6O60337 910 aa17.13■□□□□ 0.33
VTI1A-203ENST00000472892 EYA4O95677 639 aa17.13■□□□□ 0.33
VTI1A-203ENST00000472892 ATF7P17544 494 aaPredicted RBP17.13■□□□□ 0.33
VTI1A-203ENST00000472892 SMAD4Q13485 552 aaKnown RBP17.13■□□□□ 0.33
VTI1A-203ENST00000472892 CLUL1Q15846 466 aa17.13■□□□□ 0.33
VTI1A-203ENST00000472892 TMEM31Q5JXX7 168 aa17.13■□□□□ 0.33
VTI1A-203ENST00000472892 PLA2G4FQ68DD2 849 aa17.13■□□□□ 0.33
VTI1A-203ENST00000472892 RBM23Q86U06 439 aaKnown RBP17.13■□□□□ 0.33
VTI1A-203ENST00000472892 RHPN2Q8IUC4 686 aa17.13■□□□□ 0.33
VTI1A-203ENST00000472892 KSR1Q8IVT5 923 aa17.13■□□□□ 0.33
VTI1A-203ENST00000472892 EXOC8Q8IYI6 725 aa17.13■□□□□ 0.33
VTI1A-203ENST00000472892 SLFN12Q8IYM2 578 aa17.13■□□□□ 0.33
VTI1A-203ENST00000472892 ABI1Q8IZP0 508 aa17.13■□□□□ 0.33
VTI1A-203ENST00000472892 LRRC43Q8N309 656 aa17.13■□□□□ 0.33
VTI1A-203ENST00000472892 NSUN7Q8NE18 718 aaKnown RBP17.13■□□□□ 0.33
VTI1A-203ENST00000472892 MRPS27Q92552 414 aaKnown RBP17.13■□□□□ 0.33
VTI1A-203ENST00000472892 DHX33Q9H6R0 707 aaKnown RBP17.13■□□□□ 0.33
VTI1A-203ENST00000472892 TLE6Q9H808 572 aa17.13■□□□□ 0.33
VTI1A-203ENST00000472892 RAPGEFL1Q9UHV5 662 aa17.13■□□□□ 0.33
VTI1A-203ENST00000472892 SPDYE4A6NLX3 237 aa17.12■□□□□ 0.33
VTI1A-203ENST00000472892 BAG4O95429 457 aaKnown RBP17.12■□□□□ 0.33
VTI1A-203ENST00000472892 SEC24BO95487 1268 aa17.12■□□□□ 0.33
VTI1A-203ENST00000472892 SFPQP23246 707 aaKnown RBP eCLIP17.12■□□□□ 0.33
VTI1A-203ENST00000472892 NDUFV1P49821 464 aa17.12■□□□□ 0.33
VTI1A-203ENST00000472892 COASYQ13057 564 aa17.12■□□□□ 0.33
VTI1A-203ENST00000472892 KCNT2Q6UVM3 1135 aa17.12■□□□□ 0.33
VTI1A-203ENST00000472892 RNF169Q8NCN4 708 aa17.12■□□□□ 0.33
VTI1A-203ENST00000472892 SLC7A3Q8WY07 619 aa17.12■□□□□ 0.33
VTI1A-203ENST00000472892 CEP170P1Q96L14 293 aa17.12■□□□□ 0.33
VTI1A-203ENST00000472892 IFT122Q9HBG6 1241 aa17.12■□□□□ 0.33
VTI1A-203ENST00000472892 BRMS1Q9HCU9 246 aa17.12■□□□□ 0.33
VTI1A-203ENST00000472892 RGL1Q9NZL6 768 aa17.12■□□□□ 0.33
VTI1A-203ENST00000472892 PUF60Q9UHX1 559 aaKnown RBP17.12■□□□□ 0.33
VTI1A-203ENST00000472892 BTBD18B2RXH4 712 aa17.11■□□□□ 0.33
VTI1A-203ENST00000472892 PER2O15055 1255 aa17.11■□□□□ 0.33
VTI1A-203ENST00000472892 ZNF623O75123 536 aa17.11■□□□□ 0.33
VTI1A-203ENST00000472892 SLITRK3O94933 977 aa17.11■□□□□ 0.33
VTI1A-203ENST00000472892 GLP2RO95838 553 aa17.11■□□□□ 0.33
VTI1A-203ENST00000472892 ALADP13716 330 aa17.11■□□□□ 0.33
VTI1A-203ENST00000472892 YWHABP31946 246 aaKnown RBP17.11■□□□□ 0.33
VTI1A-203ENST00000472892 RFC5P40937 340 aa17.11■□□□□ 0.33
VTI1A-203ENST00000472892 PHKA2P46019 1235 aa17.11■□□□□ 0.33
VTI1A-203ENST00000472892 OTUD6AQ7L8S5 288 aa17.11■□□□□ 0.33
VTI1A-203ENST00000472892 HELQQ8TDG4 1101 aa17.11■□□□□ 0.33
VTI1A-203ENST00000472892 PRPF31Q8WWY3 499 aaKnown RBP17.11■□□□□ 0.33
VTI1A-203ENST00000472892 ZNF558Q96NG5 402 aa17.11■□□□□ 0.33
VTI1A-203ENST00000472892 CDCA3Q99618 268 aaPredicted RBP17.11■□□□□ 0.33
VTI1A-203ENST00000472892 LXNQ9BS40 222 aa17.11■□□□□ 0.33
VTI1A-203ENST00000472892 ZSWIM4Q9H7M6 989 aa17.11■□□□□ 0.33
VTI1A-203ENST00000472892 COL4A3BPQ9Y5P4 624 aa17.11■□□□□ 0.33
VTI1A-203ENST00000472892 PLXNA4Q9HCM2 1894 aa17.11■□□□□ 0.33
VTI1A-203ENST00000472892 FSD2A1L4K1 749 aa17.1■□□□□ 0.33
VTI1A-203ENST00000472892 JAK2O60674 1132 aa17.1■□□□□ 0.33
VTI1A-203ENST00000472892 SKIP12755 728 aa17.1■□□□□ 0.33
VTI1A-203ENST00000472892 PPM1AP35813 382 aa17.1■□□□□ 0.33
VTI1A-203ENST00000472892 POLGP54098 1239 aaPredicted RBP17.1■□□□□ 0.33
VTI1A-203ENST00000472892 KRT17Q04695 432 aa17.1■□□□□ 0.33
VTI1A-203ENST00000472892 DUSP6Q16828 381 aa17.1■□□□□ 0.33
VTI1A-203ENST00000472892 NCAPH2Q6IBW4 605 aa17.1■□□□□ 0.33
VTI1A-203ENST00000472892 SMRP1Q8NCR6 262 aa17.1■□□□□ 0.33
VTI1A-203ENST00000472892 RSPH1Q8WYR4 309 aa17.1■□□□□ 0.33
VTI1A-203ENST00000472892 TMEM143Q96AN5 459 aa17.1■□□□□ 0.33
VTI1A-203ENST00000472892 DYDC2Q96IM9 177 aa17.1■□□□□ 0.33
VTI1A-203ENST00000472892 NLRP4Q96MN2 994 aa17.1■□□□□ 0.33
VTI1A-203ENST00000472892 HSD17B14Q9BPX1 270 aa17.1■□□□□ 0.33
VTI1A-203ENST00000472892 MRPL9Q9BYD2 267 aaKnown RBP17.1■□□□□ 0.33
VTI1A-203ENST00000472892 NGRNQ9NPE2 291 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms