RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 CATSPER3Q86XQ3 398 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 KSR1Q8IVT5 923 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 C4orf32Q8N8J7 132 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 P2RX5Q93086 422 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 NACC1Q96RE7 527 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 RAB34Q9BZG1 259 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 LMAN2LQ9H0V9 348 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 IFT122Q9HBG6 1241 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 PRDM6Q9NQX0 595 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 COG5Q9UP83 839 aa19■□□□□ 0.63
COMMD3-210ENST00000472610 MRPL42Q9Y6G3 142 aaKnown RBP19■□□□□ 0.63
COMMD3-210ENST00000472610 A0A0U1RQF3 1178 aa18.99■□□□□ 0.63
COMMD3-210ENST00000472610 CSDE1O75534 798 aaKnown RBP18.99■□□□□ 0.63
COMMD3-210ENST00000472610 SKIP12755 728 aa18.99■□□□□ 0.63
COMMD3-210ENST00000472610 FGFR4P22455 802 aa18.99■□□□□ 0.63
COMMD3-210ENST00000472610 RARRES1P49788 294 aa18.99■□□□□ 0.63
COMMD3-210ENST00000472610 MRPS5P82675 430 aaKnown RBP18.99■□□□□ 0.63
COMMD3-210ENST00000472610 LAMTOR4Q0VGL1 99 aa18.99■□□□□ 0.63
COMMD3-210ENST00000472610 PTGDRQ13258 359 aa18.99■□□□□ 0.63
COMMD3-210ENST00000472610 PAN2Q504Q3 1202 aaKnown RBP18.99■□□□□ 0.63
COMMD3-210ENST00000472610 LARP1BQ659C4 914 aaKnown RBP18.99■□□□□ 0.63
COMMD3-210ENST00000472610 HAUS3Q68CZ6 603 aa18.99■□□□□ 0.63
COMMD3-210ENST00000472610 CATSPER4Q7RTX7 472 aa18.99■□□□□ 0.63
COMMD3-210ENST00000472610 FERMT3Q86UX7 667 aa18.99■□□□□ 0.63
COMMD3-210ENST00000472610 ECHDC2Q86YB7 292 aa18.99■□□□□ 0.63
COMMD3-210ENST00000472610 PIGOQ8TEQ8 1089 aa18.99■□□□□ 0.63
COMMD3-210ENST00000472610 SYMPKQ92797 1274 aaKnown RBP18.99■□□□□ 0.63
COMMD3-210ENST00000472610 TRAIPQ9BWF2 469 aa18.99■□□□□ 0.63
COMMD3-210ENST00000472610 AAASQ9NRG9 546 aa18.99■□□□□ 0.63
COMMD3-210ENST00000472610 DBR1Q9UK59 544 aaKnown RBP18.99■□□□□ 0.63
COMMD3-210ENST00000472610 PCDHB6Q9Y5E3 794 aa18.99■□□□□ 0.63
COMMD3-210ENST00000472610 TBKBP1A7MCY6 615 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 DLL1O00548 723 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 MED24O75448 989 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 SRGAP2CP0DJJ0 459 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 PRPHP41219 470 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 GATMP50440 423 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 POU5F1BQ06416 359 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 CUL4AQ13619 759 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 TFDP1Q14186 410 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 NBR1Q14596 966 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 AAK1Q2M2I8 961 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 TIGD5Q53EQ6 642 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 TJAP1Q5JTD0 557 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 FAM102BQ5T8I3 360 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 TMEM117Q9H0C3 514 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 XPNPEP1Q9NQW7 623 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.98■□□□□ 0.63
COMMD3-210ENST00000472610 BMP2KQ9NSY1 1161 aaPredicted RBP18.98■□□□□ 0.63
COMMD3-210ENST00000472610 LRWD1Q9UFC0 647 aa18.98■□□□□ 0.63
COMMD3-210ENST00000472610 KIAA1671Q9BY89 1806 aa18.97■□□□□ 0.63
COMMD3-210ENST00000472610 PHKA2P46019 1235 aa18.97■□□□□ 0.63
COMMD3-210ENST00000472610 PCBP1Q15365 356 aaKnown RBP eCLIP18.97■□□□□ 0.63
COMMD3-210ENST00000472610 SPOUT1Q5T280 376 aaKnown RBP18.97■□□□□ 0.63
COMMD3-210ENST00000472610 ABI1Q8IZP0 508 aa18.97■□□□□ 0.63
COMMD3-210ENST00000472610 RNF149Q8NC42 400 aa18.97■□□□□ 0.63
COMMD3-210ENST00000472610 RSPH1Q8WYR4 309 aa18.97■□□□□ 0.63
COMMD3-210ENST00000472610 ASB2Q96Q27 587 aa18.97■□□□□ 0.63
COMMD3-210ENST00000472610 PIN4Q9Y237 131 aaKnown RBP18.97■□□□□ 0.63
COMMD3-210ENST00000472610 PCDHB12Q9Y5F1 795 aa18.97■□□□□ 0.63
COMMD3-210ENST00000472610 EYSQ5T1H1 3165 aa18.97■□□□□ 0.63
COMMD3-210ENST00000472610 FGFR1P11362 822 aa18.96■□□□□ 0.63
COMMD3-210ENST00000472610 ARL2P36404 184 aa18.96■□□□□ 0.63
COMMD3-210ENST00000472610 RAB27AP51159 221 aa18.96■□□□□ 0.63
COMMD3-210ENST00000472610 CSPP1Q1MSJ5 1256 aa18.96■□□□□ 0.63
COMMD3-210ENST00000472610 TWF2Q6IBS0 349 aaKnown RBP18.96■□□□□ 0.63
COMMD3-210ENST00000472610 IGSF22Q8N9C0 903 aa18.96■□□□□ 0.63
COMMD3-210ENST00000472610 MCPH1Q8NEM0 835 aa18.96■□□□□ 0.63
COMMD3-210ENST00000472610 HLA-CQ95604 372 aa18.96■□□□□ 0.63
COMMD3-210ENST00000472610 GTF3C3Q9Y5Q9 886 aa18.96■□□□□ 0.63
COMMD3-210ENST00000472610 CCT6AP40227 531 aaKnown RBP18.95■□□□□ 0.62
COMMD3-210ENST00000472610 PTENP60484 403 aa18.95■□□□□ 0.62
COMMD3-210ENST00000472610 NCBP1Q09161 790 aaKnown RBP18.95■□□□□ 0.62
COMMD3-210ENST00000472610 DTHD1Q6ZMT9 781 aa18.95■□□□□ 0.62
COMMD3-210ENST00000472610 ZNF598Q86UK7 904 aaKnown RBP18.95■□□□□ 0.62
COMMD3-210ENST00000472610 IFNLR1Q8IU57 520 aaPredicted RBP18.95■□□□□ 0.62
COMMD3-210ENST00000472610 CASD1Q96PB1 797 aa18.95■□□□□ 0.62
COMMD3-210ENST00000472610 AGPAT5Q9NUQ2 364 aa18.95■□□□□ 0.62
COMMD3-210ENST00000472610 TYW1Q9NV66 732 aaKnown RBP18.95■□□□□ 0.62
COMMD3-210ENST00000472610 PLAGL2Q9UPG8 496 aa18.95■□□□□ 0.62
COMMD3-210ENST00000472610 A0A087WWV3 80 aa18.94■□□□□ 0.62
COMMD3-210ENST00000472610 GRM6O15303 877 aa18.94■□□□□ 0.62
COMMD3-210ENST00000472610 USO1O60763 962 aaKnown RBP18.94■□□□□ 0.62
COMMD3-210ENST00000472610 ZNF623O75123 536 aa18.94■□□□□ 0.62
COMMD3-210ENST00000472610 LAG3P18627 525 aa18.94■□□□□ 0.62
COMMD3-210ENST00000472610 PDCP20941 246 aa18.94■□□□□ 0.62
COMMD3-210ENST00000472610 POTEGQ6S5H5 508 aa18.94■□□□□ 0.62
COMMD3-210ENST00000472610 KLHL23Q8NBE8 558 aa18.94■□□□□ 0.62
COMMD3-210ENST00000472610 RNF169Q8NCN4 708 aa18.94■□□□□ 0.62
COMMD3-210ENST00000472610 COL25A1Q9BXS0 654 aaPredicted RBP18.94■□□□□ 0.62
COMMD3-210ENST00000472610 NFKBIZQ9BYH8 718 aa18.94■□□□□ 0.62
COMMD3-210ENST00000472610 NSUN3Q9H649 340 aaKnown RBP18.94■□□□□ 0.62
COMMD3-210ENST00000472610 MINDY3Q9H8M7 445 aa18.94■□□□□ 0.62
COMMD3-210ENST00000472610 FAM105AQ9NUU6 356 aa18.94■□□□□ 0.62
COMMD3-210ENST00000472610 RNF19AQ9NV58 838 aa18.94■□□□□ 0.62
COMMD3-210ENST00000472610 ARHGEF35A5YM69 484 aa18.93■□□□□ 0.62
COMMD3-210ENST00000472610 ERLIN2O94905 339 aa18.93■□□□□ 0.62
COMMD3-210ENST00000472610 ITGB1P05556 798 aa18.93■□□□□ 0.62
COMMD3-210ENST00000472610 AXLP30530 894 aa18.93■□□□□ 0.62
COMMD3-210ENST00000472610 ATP2C1P98194 919 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms