RNA–Protein interactions for RNA: ENST00000472308.1

SHH-205, Transcript of sonic hedgehog, humanhuman

TSL 1 (best)

Gene SHH, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-205ENST00000472308 PTPN14Q15678 1187 aa20.86■□□□□ 0.93
SHH-205ENST00000472308 EFCAB12Q6NXP0 572 aa20.86■□□□□ 0.93
SHH-205ENST00000472308 PPP1R18Q6NYC8 613 aa20.86■□□□□ 0.93
SHH-205ENST00000472308 DDX53Q86TM3 631 aaKnown RBP20.86■□□□□ 0.93
SHH-205ENST00000472308 PLA2G4DQ86XP0 818 aa20.86■□□□□ 0.93
SHH-205ENST00000472308 TEX2Q8IWB9 1127 aa20.86■□□□□ 0.93
SHH-205ENST00000472308 KIAA2013Q8IYS2 634 aa20.86■□□□□ 0.93
SHH-205ENST00000472308 KCNG4Q8TDN1 519 aa20.86■□□□□ 0.93
SHH-205ENST00000472308 CRYGNQ8WXF5 182 aa20.86■□□□□ 0.93
SHH-205ENST00000472308 IGSF21Q96ID5 467 aa20.86■□□□□ 0.93
SHH-205ENST00000472308 TMEM87BQ96K49 555 aa20.86■□□□□ 0.93
SHH-205ENST00000472308 MAP7D2Q96T17 732 aa20.86■□□□□ 0.93
SHH-205ENST00000472308 C2orf16Q68DN1 1984 aa20.86■□□□□ 0.93
SHH-205ENST00000472308 MAGEB2O15479 319 aa20.85■□□□□ 0.93
SHH-205ENST00000472308 ZNF76P36508 570 aa20.85■□□□□ 0.93
SHH-205ENST00000472308 FUT2Q10981 343 aa20.85■□□□□ 0.93
SHH-205ENST00000472308 GIT2Q14161 759 aa20.85■□□□□ 0.93
SHH-205ENST00000472308 MICU3Q86XE3 530 aa20.85■□□□□ 0.93
SHH-205ENST00000472308 SEMA4AQ9H3S1 761 aa20.85■□□□□ 0.93
SHH-205ENST00000472308 CEP131Q9UPN4 1083 aa20.85■□□□□ 0.93
SHH-205ENST00000472308 SLC12A7Q9Y666 1083 aa20.85■□□□□ 0.93
SHH-205ENST00000472308 B4GALT3O60512 393 aa20.84■□□□□ 0.93
SHH-205ENST00000472308 CSDE1O75534 798 aaKnown RBP20.84■□□□□ 0.93
SHH-205ENST00000472308 AP3B2Q13367 1082 aa20.84■□□□□ 0.93
SHH-205ENST00000472308 ZNF746Q6NUN9 644 aaPredicted RBP20.84■□□□□ 0.93
SHH-205ENST00000472308 TMEM87AQ8NBN3 555 aa20.84■□□□□ 0.93
SHH-205ENST00000472308 LRRC2Q9BYS8 371 aa20.84■□□□□ 0.93
SHH-205ENST00000472308 NRDE2Q9H7Z3 1164 aa20.84■□□□□ 0.93
SHH-205ENST00000472308 TBC1D13Q9NVG8 400 aa20.84■□□□□ 0.93
SHH-205ENST00000472308 GABBR1Q9UBS5 961 aa20.84■□□□□ 0.93
SHH-205ENST00000472308 MEIS3P2A8K0S8 358 aa20.83■□□□□ 0.93
SHH-205ENST00000472308 ZNF862O60290 1169 aa20.83■□□□□ 0.93
SHH-205ENST00000472308 GALTP07902 379 aa20.83■□□□□ 0.93
SHH-205ENST00000472308 CFHP08603 1231 aa20.83■□□□□ 0.93
SHH-205ENST00000472308 CLCN4P51793 760 aa20.83■□□□□ 0.93
SHH-205ENST00000472308 LETM2Q2VYF4 491 aa20.83■□□□□ 0.93
SHH-205ENST00000472308 SMAP1Q8IYB5 467 aaPredicted RBP20.83■□□□□ 0.93
SHH-205ENST00000472308 RSAD2Q8WXG1 361 aa20.83■□□□□ 0.93
SHH-205ENST00000472308 RIN2Q8WYP3 895 aaPredicted RBP20.83■□□□□ 0.93
SHH-205ENST00000472308 LPPQ93052 612 aa20.83■□□□□ 0.93
SHH-205ENST00000472308 IGSF9Q9P2J2 1179 aa20.83■□□□□ 0.93
SHH-205ENST00000472308 DNAJB4Q9UDY4 337 aa20.83■□□□□ 0.93
SHH-205ENST00000472308 SMCO2A6NFE2 343 aa20.82■□□□□ 0.92
SHH-205ENST00000472308 TMOD1P28289 359 aa20.82■□□□□ 0.92
SHH-205ENST00000472308 PHKA2P46019 1235 aa20.82■□□□□ 0.92
SHH-205ENST00000472308 LONRF3Q496Y0 759 aa20.82■□□□□ 0.92
SHH-205ENST00000472308 C15orf39Q6ZRI6 1047 aa20.82■□□□□ 0.92
SHH-205ENST00000472308 SGMS1Q86VZ5 419 aa20.82■□□□□ 0.92
SHH-205ENST00000472308 PPFIBP1Q86W92 1011 aa20.82■□□□□ 0.92
SHH-205ENST00000472308 ZNF710Q8N1W2 664 aa20.82■□□□□ 0.92
SHH-205ENST00000472308 KLHL5Q96PQ7 755 aa20.82■□□□□ 0.92
SHH-205ENST00000472308 ZNF577Q9BSK1 485 aa20.82■□□□□ 0.92
SHH-205ENST00000472308 DACT1Q9NYF0 836 aa20.82■□□□□ 0.92
SHH-205ENST00000472308 WNT16Q9UBV4 365 aa20.82■□□□□ 0.92
SHH-205ENST00000472308 PCDHA10Q9Y5I2 948 aa20.82■□□□□ 0.92
SHH-205ENST00000472308 MYH9P35579 1960 aaKnown RBP20.82■□□□□ 0.92
SHH-205ENST00000472308 GPR179Q6PRD1 2367 aa20.82■□□□□ 0.92
SHH-205ENST00000472308 ADAMTS3O15072 1205 aa20.81■□□□□ 0.92
SHH-205ENST00000472308 PSAPP07602 524 aa20.81■□□□□ 0.92
SHH-205ENST00000472308 CYP3A4P08684 503 aa20.81■□□□□ 0.92
SHH-205ENST00000472308 CNPP09543 421 aaKnown RBP20.81■□□□□ 0.92
SHH-205ENST00000472308 SLC11A1P49279 550 aa20.81■□□□□ 0.92
SHH-205ENST00000472308 DRP2Q13474 957 aa20.81■□□□□ 0.92
SHH-205ENST00000472308 PUM1Q14671 1186 aaKnown RBP eCLIP20.81■□□□□ 0.92
SHH-205ENST00000472308 FAM167AQ96KS9 214 aa20.81■□□□□ 0.92
SHH-205ENST00000472308 TRAIPQ9BWF2 469 aa20.81■□□□□ 0.92
SHH-205ENST00000472308 TBC1D22BQ9NU19 505 aa20.81■□□□□ 0.92
SHH-205ENST00000472308 BARHL2Q9NY43 387 aa20.81■□□□□ 0.92
SHH-205ENST00000472308 DLL3Q9NYJ7 618 aa20.81■□□□□ 0.92
SHH-205ENST00000472308 DLGAP2Q9P1A6 1054 aa20.81■□□□□ 0.92
SHH-205ENST00000472308 LILRB3O75022 631 aa20.8■□□□□ 0.92
SHH-205ENST00000472308 OATP04181 439 aa20.8■□□□□ 0.92
SHH-205ENST00000472308 JAKMIP3Q5VZ66 844 aa20.8■□□□□ 0.92
SHH-205ENST00000472308 NLRP7Q8WX94 980 aa20.8■□□□□ 0.92
SHH-205ENST00000472308 RSPH1Q8WYR4 309 aa20.8■□□□□ 0.92
SHH-205ENST00000472308 SCLT1Q96NL6 688 aa20.8■□□□□ 0.92
SHH-205ENST00000472308 TBC1D17Q9HA65 648 aa20.8■□□□□ 0.92
SHH-205ENST00000472308 CA14Q9ULX7 337 aa20.8■□□□□ 0.92
SHH-205ENST00000472308 KRT37O76014 449 aa20.79■□□□□ 0.92
SHH-205ENST00000472308 PRKCEQ02156 737 aa20.79■□□□□ 0.92
SHH-205ENST00000472308 UGCGQ16739 394 aa20.79■□□□□ 0.92
SHH-205ENST00000472308 NOMO2Q5JPE7 1267 aa20.79■□□□□ 0.92
SHH-205ENST00000472308 APOA5Q6Q788 366 aa20.79■□□□□ 0.92
SHH-205ENST00000472308 GLB1LQ6UWU2 654 aa20.79■□□□□ 0.92
SHH-205ENST00000472308 ZNF280BQ86YH2 543 aa20.79■□□□□ 0.92
SHH-205ENST00000472308 DCLK2Q8N568 766 aa20.79■□□□□ 0.92
SHH-205ENST00000472308 CHST12Q9NRB3 414 aa20.79■□□□□ 0.92
SHH-205ENST00000472308 INPP5FQ9Y2H2 1132 aa20.79■□□□□ 0.92
SHH-205ENST00000472308 V9GY48 417 aaPredicted RBP20.79■□□□□ 0.92
SHH-205ENST00000472308 TPRP12270 2363 aaKnown RBP20.79■□□□□ 0.92
SHH-205ENST00000472308 SPDYE4A6NLX3 237 aa20.78■□□□□ 0.92
SHH-205ENST00000472308 hCG_1984214I3L0E3 225 aa20.78■□□□□ 0.92
SHH-205ENST00000472308 STK25O00506 426 aa20.78■□□□□ 0.92
SHH-205ENST00000472308 OFD1O75665 1012 aa20.78■□□□□ 0.92
SHH-205ENST00000472308 SSBP05455 408 aaKnown RBP eCLIP20.78■□□□□ 0.92
SHH-205ENST00000472308 KLRC2P26717 231 aa20.78■□□□□ 0.92
SHH-205ENST00000472308 SETQ01105 290 aaPredicted RBP20.78■□□□□ 0.92
SHH-205ENST00000472308 SLC44A3Q8N4M1 653 aa20.78■□□□□ 0.92
SHH-205ENST00000472308 ZNF713Q8N859 430 aaPredicted RBP20.78■□□□□ 0.92
SHH-205ENST00000472308 CMASQ8NFW8 434 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms