RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 GIT2Q14161 759 aa13.65□□□□□ -0.22
PRKCB-205ENST00000472066 TFDP1Q14186 410 aa13.65□□□□□ -0.22
PRKCB-205ENST00000472066 PRPF38BQ5VTL8 546 aaKnown RBP13.65□□□□□ -0.22
PRKCB-205ENST00000472066 CNKSR3Q6P9H4 555 aa13.65□□□□□ -0.22
PRKCB-205ENST00000472066 CHRDL2Q6WN34 429 aa13.65□□□□□ -0.22
PRKCB-205ENST00000472066 FSIP1Q8NA03 581 aa13.65□□□□□ -0.22
PRKCB-205ENST00000472066 BSNDQ8WZ55 320 aa13.65□□□□□ -0.22
PRKCB-205ENST00000472066 SEPT8Q92599 483 aa13.65□□□□□ -0.22
PRKCB-205ENST00000472066 DRC1Q96MC2 740 aa13.65□□□□□ -0.22
PRKCB-205ENST00000472066 PRO3102Q9H379 93 aa13.65□□□□□ -0.22
PRKCB-205ENST00000472066 GOLPH3LQ9H4A5 285 aa13.65□□□□□ -0.22
PRKCB-205ENST00000472066 PADI3Q9ULW8 664 aa13.65□□□□□ -0.22
PRKCB-205ENST00000472066 MYMKA6NI61 221 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 GPR182O15218 404 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 CSDE1O75534 798 aaKnown RBP13.64□□□□□ -0.23
PRKCB-205ENST00000472066 KRT18P05783 430 aaKnown RBP13.64□□□□□ -0.23
PRKCB-205ENST00000472066 ACTN1P12814 892 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 PTENP60484 403 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
PRKCB-205ENST00000472066 NFX1Q12986 1120 aaKnown RBP13.64□□□□□ -0.23
PRKCB-205ENST00000472066 PAK2Q13177 524 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 SHHQ15465 462 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 LONRF3Q496Y0 759 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 ODR4Q5SWX8 454 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 C9orf50Q5SZB4 431 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 PSRC1Q6PGN9 363 aaPredicted RBP13.64□□□□□ -0.23
PRKCB-205ENST00000472066 SRGAP1Q7Z6B7 1085 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 FAM228AQ86W67 206 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 TMEM87AQ8NBN3 555 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 STAMQ92783 540 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 APBB2Q92870 758 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 IFT74Q96LB3 600 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 REEP2Q9BRK0 252 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 IFIH1Q9BYX4 1025 aaKnown RBP13.64□□□□□ -0.23
PRKCB-205ENST00000472066 INO80BQ9C086 356 aaPredicted RBP13.64□□□□□ -0.23
PRKCB-205ENST00000472066 ERVK-5Q9HDB9 667 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 KBTBD4Q9NVX7 518 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 SERTAD1Q9UHV2 236 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 ODF2LQ9ULJ1 636 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 ST3GAL5Q9UNP4 418 aa13.64□□□□□ -0.23
PRKCB-205ENST00000472066 WDR81Q562E7 1941 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 LRRIQ4A6NIV6 560 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 ACTN4O43707 911 aaKnown RBP13.63□□□□□ -0.23
PRKCB-205ENST00000472066 GADD45BO75293 160 aaPredicted RBP13.63□□□□□ -0.23
PRKCB-205ENST00000472066 SLFN14P0C7P3 912 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 FGFR4P22455 802 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 SYKP43405 635 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 NAMPTP43490 491 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 PHKA2P46019 1235 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 PEX3P56589 373 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 AMPD3Q01432 767 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 IKBKEQ14164 716 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 PPP2R5AQ15172 486 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 OTOP2Q7RTS6 562 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 DYMQ7RTS9 669 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
PRKCB-205ENST00000472066 CEP57L1Q8IYX8 460 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 HERVK_113Q902F9 699 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 DDX12PQ92771 950 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 NFKBIZQ9BYH8 718 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 LRRC27Q9C0I9 530 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 TNMDQ9H2S6 317 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 MINDY3Q9H8M7 445 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 C17orf75Q9HAS0 396 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 MAGEF1Q9HAY2 307 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 USP25Q9UHP3 1055 aa13.63□□□□□ -0.23
PRKCB-205ENST00000472066 TRIP12Q14669 1992 aaPredicted RBP13.63□□□□□ -0.23
PRKCB-205ENST00000472066 LTBP2Q14767 1821 aa13.62□□□□□ -0.23
PRKCB-205ENST00000472066 ABHD14A-ACY1A0A1B0GW23 586 aa13.62□□□□□ -0.23
PRKCB-205ENST00000472066 PRPF40AO75400 957 aaKnown RBP13.62□□□□□ -0.23
PRKCB-205ENST00000472066 BAIAP3O94812 1187 aa13.62□□□□□ -0.23
PRKCB-205ENST00000472066 PLS3P13797 630 aa13.62□□□□□ -0.23
PRKCB-205ENST00000472066 NPTX2P47972 431 aa13.62□□□□□ -0.23
PRKCB-205ENST00000472066 ZNF131P52739 623 aa13.62□□□□□ -0.23
PRKCB-205ENST00000472066 FAM43BQ6ZT52 329 aaPredicted RBP13.62□□□□□ -0.23
PRKCB-205ENST00000472066 FMR1NBQ8N0W7 255 aaPredicted RBP13.62□□□□□ -0.23
PRKCB-205ENST00000472066 DEPTORQ8TB45 409 aa13.62□□□□□ -0.23
PRKCB-205ENST00000472066 DNAJC19Q96DA6 116 aa13.62□□□□□ -0.23
PRKCB-205ENST00000472066 NTPCRQ9BSD7 190 aaKnown RBP13.62□□□□□ -0.23
PRKCB-205ENST00000472066 C2orf40Q9H1Z8 148 aa13.62□□□□□ -0.23
PRKCB-205ENST00000472066 TMX1Q9H3N1 280 aa13.62□□□□□ -0.23
PRKCB-205ENST00000472066 KCNG1Q9UIX4 513 aa13.62□□□□□ -0.23
PRKCB-205ENST00000472066 COLQQ9Y215 455 aaPredicted RBP13.62□□□□□ -0.23
PRKCB-205ENST00000472066 CCDC169A6NNP5 214 aa13.61□□□□□ -0.23
PRKCB-205ENST00000472066 INO80B-WBP1J3KQ70 363 aa13.61□□□□□ -0.23
PRKCB-205ENST00000472066 ENPP3O14638 875 aa13.61□□□□□ -0.23
PRKCB-205ENST00000472066 TBCAO75347 108 aaKnown RBP13.61□□□□□ -0.23
PRKCB-205ENST00000472066 FAM13AO94988 1023 aa13.61□□□□□ -0.23
PRKCB-205ENST00000472066 ZNF202O95125 648 aa13.61□□□□□ -0.23
PRKCB-205ENST00000472066 SFPQP23246 707 aaKnown RBP eCLIP13.61□□□□□ -0.23
PRKCB-205ENST00000472066 MBTD1Q05BQ5 628 aa13.61□□□□□ -0.23
PRKCB-205ENST00000472066 SNW1Q13573 536 aaKnown RBP13.61□□□□□ -0.23
PRKCB-205ENST00000472066 RASIP1Q5U651 963 aa13.61□□□□□ -0.23
PRKCB-205ENST00000472066 CDCA2Q69YH5 1023 aaPredicted RBP13.61□□□□□ -0.23
PRKCB-205ENST00000472066 CATSPER4Q7RTX7 472 aa13.61□□□□□ -0.23
PRKCB-205ENST00000472066 RTN4RL1Q86UN2 441 aaPredicted RBP13.61□□□□□ -0.23
PRKCB-205ENST00000472066 ZBTB8OSQ8IWT0 167 aa13.61□□□□□ -0.23
PRKCB-205ENST00000472066 TDHQ8IZJ6 230 aa13.61□□□□□ -0.23
PRKCB-205ENST00000472066 MYCT1Q8N699 235 aa13.61□□□□□ -0.23
PRKCB-205ENST00000472066 ENGASEQ8NFI3 743 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms