RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TMEM161AQ9NX61 479 aa9.09□□□□□ -0.95
USP48-207ENST00000471752 SUCLA2Q9P2R7 463 aaPredicted RBP9.09□□□□□ -0.95
USP48-207ENST00000471752 NLRC5Q86WI3 1866 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 BTBD18B2RXH4 712 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 GALR2O43603 387 aaPredicted RBP9.08□□□□□ -0.96
USP48-207ENST00000471752 CCNT1O60563 726 aaKnown RBP9.08□□□□□ -0.96
USP48-207ENST00000471752 GPR37L1O60883 481 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 WEE2P0C1S8 567 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 HOXA11P31270 313 aaPredicted RBP9.08□□□□□ -0.96
USP48-207ENST00000471752 JAK3P52333 1124 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 CYP4A11Q02928 519 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 KCNC3Q14003 757 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 PLPP4Q5VZY2 271 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 MCTP2Q6DN12 878 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 KCNT2Q6UVM3 1135 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 ZNF280BQ86YH2 543 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 RHPN2Q8IUC4 686 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 EFHBQ8N7U6 833 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 C12orf76Q8N812 135 aaPredicted RBP9.08□□□□□ -0.96
USP48-207ENST00000471752 NSUN7Q8NE18 718 aaKnown RBP9.08□□□□□ -0.96
USP48-207ENST00000471752 PRPF31Q8WWY3 499 aaKnown RBP9.08□□□□□ -0.96
USP48-207ENST00000471752 C1QTNF1Q9BXJ1 281 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 TMEM117Q9H0C3 514 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 S1PR5Q9H228 398 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 SLKQ9H2G2 1235 aaPredicted RBP9.08□□□□□ -0.96
USP48-207ENST00000471752 TLE6Q9H808 572 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 IFT122Q9HBG6 1241 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 PPP4R2Q9NY27 417 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 ORC3Q9UBD5 711 aaPredicted RBP9.08□□□□□ -0.96
USP48-207ENST00000471752 TCEAL9Q9UHQ7 104 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 MUTYHQ9UIF7 546 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 CD207Q9UJ71 328 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 USP34Q70CQ2 3546 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 KIAA1671Q9BY89 1806 aa9.08□□□□□ -0.96
USP48-207ENST00000471752 ZDBF2Q9HCK1 2354 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 A0A0U1RQF3 1178 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 F8W810 466 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 SLITRK3O94933 977 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 EYA4O95677 639 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 SRGAP2CP0DJJ0 459 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 SP100P23497 879 aaPredicted RBP9.07□□□□□ -0.96
USP48-207ENST00000471752 SFNP31947 248 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 PHKA2P46019 1235 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 NDUFV1P49821 464 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 GUCY1B3Q02153 619 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 UBXN11Q5T124 520 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 SYCE2Q6PIF2 218 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 KRT25Q7Z3Z0 450 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 RNF135Q8IUD6 432 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 ADHFE1Q8IWW8 467 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 THNSL1Q8IYQ7 743 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 FAM167AQ96KS9 214 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 SCLT1Q96NL6 688 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 MAP7D2Q96T17 732 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 CXCL16Q9H2A7 254 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 TMEM60Q9H2L4 133 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 ELAC1Q9H777 363 aaKnown RBP9.07□□□□□ -0.96
USP48-207ENST00000471752 XPNPEP1Q9NQW7 623 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 CYP26B1Q9NR63 512 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 TLR9Q9NR96 1032 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 C1orf112Q9NSG2 853 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 MIOSQ9NXC5 875 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 DNAJB4Q9UDY4 337 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 USP20Q9Y2K6 914 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 RWDD3Q9Y3V2 267 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 USP15Q9Y4E8 981 aaPredicted RBP9.07□□□□□ -0.96
USP48-207ENST00000471752 PCDHB12Q9Y5F1 795 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 TECTAO75443 2155 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 VPS13AQ96RL7 3174 aa9.07□□□□□ -0.96
USP48-207ENST00000471752 MYO15AQ9UKN7 3530 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 CCDC194A0A1B0GVG4 234 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 TTLL13PA6NNM8 815 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 EPB41L2O43491 1005 aaKnown RBP9.06□□□□□ -0.96
USP48-207ENST00000471752 OFD1O75665 1012 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 DDHD2O94830 711 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 RPLP2P05387 115 aaKnown RBP9.06□□□□□ -0.96
USP48-207ENST00000471752 ZSCAN20P17040 1043 aaPredicted RBP9.06□□□□□ -0.96
USP48-207ENST00000471752 ATP2B1P20020 1258 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 TMOD1P28289 359 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 QARSP47897 775 aaKnown RBP9.06□□□□□ -0.96
USP48-207ENST00000471752 NEK4P51957 841 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 PSMC5P62195 406 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 LAMTOR4Q0VGL1 99 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 PPP2R5CQ13362 524 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 SMAD4Q13485 552 aaKnown RBP9.06□□□□□ -0.96
USP48-207ENST00000471752 DUSP6Q16828 381 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 NAALADL2Q58DX5 795 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 NCAPH2Q6IBW4 605 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 PPP4R3AQ6IN85 833 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 AGMOQ6ZNB7 445 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 HFE2Q6ZVN8 426 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 TAS1R1Q7RTX1 841 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 NEK8Q86SG6 692 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 CDR2LQ86X02 465 aaPredicted RBP9.06□□□□□ -0.96
USP48-207ENST00000471752 SLC39A11Q8N1S5 342 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 SMRP1Q8NCR6 262 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 ASAP3Q8TDY4 903 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 MRPS27Q92552 414 aaKnown RBP9.06□□□□□ -0.96
USP48-207ENST00000471752 GTF3C6Q969F1 213 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 CEP170P1Q96L14 293 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms