RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 TMEM87BQ96K49 555 aa11.61□□□□□ -0.55
CHMP2B-203ENST00000471660 DHRS1Q96LJ7 313 aa11.61□□□□□ -0.55
CHMP2B-203ENST00000471660 CCDC42Q96M95 316 aa11.61□□□□□ -0.55
CHMP2B-203ENST00000471660 CNNM2Q9H8M5 875 aa11.61□□□□□ -0.55
CHMP2B-203ENST00000471660 TBCCD1Q9NVR7 557 aa11.61□□□□□ -0.55
CHMP2B-203ENST00000471660 STK24Q9Y6E0 443 aa11.61□□□□□ -0.55
CHMP2B-203ENST00000471660 COL11A2P13942 1736 aaPredicted RBP11.61□□□□□ -0.55
CHMP2B-203ENST00000471660 ATP9BO43861 1147 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 ATP9AO75110 1047 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 NTSR2O95665 410 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 NUDT17P0C025 328 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 GM2AP17900 193 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 TM4SF1P30408 202 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 HPCAP84074 193 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 GSTM4Q03013 218 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 UBE4AQ14139 1066 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 PPP2R5BQ15173 497 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 LIN52Q52LA3 116 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 RNF43Q68DV7 783 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 SEPT14Q6ZU15 432 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 CTU1Q7Z7A3 348 aaKnown RBP11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 IRF2BP1Q8IU81 584 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 NOSTRINQ8IVI9 506 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 FITM2Q8N6M3 262 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 USP38Q8NB14 1042 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 SEC14L1Q92503 715 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 NOX5Q96PH1 765 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 DDX43Q9NXZ2 648 aaKnown RBP11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 NID2Q14112 1375 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 PCNTO95613 3336 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 A0A1B0GUL6 1792 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 NCK2O43639 380 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 CYP1A1P04798 512 aaPredicted RBP11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 TROVE2P10155 538 aaKnown RBP eCLIP11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 RASA1P20936 1047 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 HOXD12P35452 270 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 ACVR2BQ13705 512 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 TMEM259Q4ZIN3 620 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 RILPL1Q5EBL4 403 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 OLFML1Q6UWY5 402 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 MYOCDQ8IZQ8 938 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 FAM13CQ8NE31 585 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 EDC3Q96F86 508 aaKnown RBP11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 SETDB2Q96T68 719 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 TXLNGYQ9BZA5 131 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 TAOK3Q9H2K8 898 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 INTUQ9ULD6 942 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 ANKRD31Q8N7Z5 1873 aa11.6□□□□□ -0.55
CHMP2B-203ENST00000471660 ZNF213O14771 459 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 AFPP02771 609 aaKnown RBP11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 MLH1P40692 756 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 TOB1P50616 345 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 CHST3Q7LGC8 479 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 MB21D2Q8IYB1 491 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 SMYD4Q8IYR2 804 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 PSMB7Q99436 277 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 PRMT1Q99873 361 aaKnown RBP11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 ETNK1Q9HBU6 452 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 AGPAT5Q9NUQ2 364 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 PNMA3Q9UL41 463 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 TRIM33Q9UPN9 1127 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 TMEM247A6NEH6 219 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 AGTP01019 485 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 HNRNPCP07910 306 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 VARSP26640 1264 aaKnown RBP11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 FKBP4Q02790 459 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 TRIM29Q14134 588 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 MAP1SQ66K74 1059 aaPredicted RBP11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 C2CD5Q86YS7 1000 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 ARL10Q8N8L6 244 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 OSBP2Q969R2 916 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 STK36Q9NRP7 1315 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 SYNPO2Q9UMS6 1093 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 PLAGL2Q9UPG8 496 aa11.59□□□□□ -0.55
CHMP2B-203ENST00000471660 LGR5O75473 907 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 PABPC4LP0CB38 370 aaKnown RBP11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 ZAP70P43403 619 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 HDAC4P56524 1084 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 SUSD4Q5VX71 490 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 RALYLQ86SE5 291 aaKnown RBP11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 SAMD3Q8N6K7 520 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 NELFBQ8WX92 580 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 PPP1R12CQ9BZL4 782 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 NACA2Q9H009 215 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 NEUROG2Q9H2A3 272 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 EPB41L1Q9H4G0 881 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 GPHNQ9NQX3 736 aaPredicted RBP11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 ZNF804BA4D1E1 1349 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 EYA4O95677 639 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 IARSP41252 1262 aaKnown RBP11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 MCAMP43121 646 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 CDK7P50613 346 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 KIF11P52732 1056 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 MKRN3Q13064 507 aaKnown RBP11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 PKN2Q16513 984 aaKnown RBP11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 P3H1Q32P28 736 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 SLC44A4Q53GD3 710 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 SOGA3Q5TF21 947 aa11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 DUS1LQ6P1R4 473 aaKnown RBP11.58□□□□□ -0.56
CHMP2B-203ENST00000471660 OGFOD1Q8N543 542 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms