RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 TROAPQ12815 778 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 SNW1Q13573 536 aaKnown RBP7.8□□□□□ -1.16
HDAC1-204ENST00000471488 DSC3Q14574 896 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 ELMSAN1Q6PJG2 1045 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 CASC1Q6TDU7 716 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 GLB1LQ6UWU2 654 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 PALB2Q86YC2 1186 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 ZNF654Q8IZM8 581 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 NCOA7Q8NI08 942 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 BCL7CQ8WUZ0 217 aaPredicted RBP7.8□□□□□ -1.16
HDAC1-204ENST00000471488 PHKBQ93100 1093 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 IGSF21Q96ID5 467 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 KLHL5Q96PQ7 755 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 MYADMQ96S97 322 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 SPZ1Q9BXG8 430 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 BCO2Q9BYV7 579 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 MRPL17Q9NRX2 175 aaKnown RBP7.8□□□□□ -1.16
HDAC1-204ENST00000471488 DNAJB4Q9UDY4 337 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 PIN4Q9Y237 131 aaKnown RBP7.8□□□□□ -1.16
HDAC1-204ENST00000471488 U3KPZ7 1027 aaPredicted RBP7.8□□□□□ -1.16
HDAC1-204ENST00000471488 ZNF292O60281 2723 aa7.8□□□□□ -1.16
HDAC1-204ENST00000471488 CLUHO75153 1309 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 E7EWF7 191 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 INPPL1O15357 1258 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 RFPL2O75678 378 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 CCNE2O96020 404 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 URODP06132 367 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 CNPP09543 421 aaKnown RBP7.79□□□□□ -1.16
HDAC1-204ENST00000471488 CD72P21854 359 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 EIF4BP23588 611 aaKnown RBP7.79□□□□□ -1.16
HDAC1-204ENST00000471488 SLC11A1P49279 550 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 CLCN4P51793 760 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 POLGP54098 1239 aaPredicted RBP7.79□□□□□ -1.16
HDAC1-204ENST00000471488 LMNB2Q03252 620 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 DMWDQ09019 674 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 CEP55Q53EZ4 464 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 NOMO2Q5JPE7 1267 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 PPM1JQ5JR12 505 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 TSSK4Q6SA08 328 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 ABHD15Q6UXT9 468 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 DDX53Q86TM3 631 aaKnown RBP7.79□□□□□ -1.16
HDAC1-204ENST00000471488 PLA2G4DQ86XP0 818 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 SRBD1Q8N5C6 995 aaKnown RBP7.79□□□□□ -1.16
HDAC1-204ENST00000471488 PJA1Q8NG27 643 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 URGCPQ8TCY9 931 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 BBXQ8WY36 941 aaPredicted RBP7.79□□□□□ -1.16
HDAC1-204ENST00000471488 NRDE2Q9H7Z3 1164 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 TBC1D13Q9NVG8 400 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 DACT1Q9NYF0 836 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 GABBR1Q9UBS5 961 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 GMEB2Q9UKD1 530 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 RAB23Q9ULC3 237 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 POLIQ9UNA4 740 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 SMG5Q9UPR3 1016 aaKnown RBP7.79□□□□□ -1.16
HDAC1-204ENST00000471488 PRG3Q9Y2Y8 225 aaPredicted RBP7.79□□□□□ -1.16
HDAC1-204ENST00000471488 NUMBLQ9Y6R0 609 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 COL1A2P08123 1366 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 EVPLQ92817 2033 aa7.79□□□□□ -1.16
HDAC1-204ENST00000471488 NFASCO94856 1347 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 A0A0U1RQF3 1178 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 FAM170BA6NMN3 283 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 MEIS3P2A8K0S8 358 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 PRR5-ARHGAP8B1AHC4 643 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 ZBTB42B2RXF5 422 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 CHMP2AO43633 222 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 GLUD1P00367 558 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 POMCP01189 267 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 ADH1AP07327 375 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 PSAPP07602 524 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 GALTP07902 379 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 CYP21A2P08686 494 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 CALM1P0DP23 149 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 CALM2P0DP24 149 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 CALM3P0DP25 149 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 GLULP15104 373 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 ATP4AP20648 1035 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 OR1G1P47890 313 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 GNAQP50148 359 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 ADCY7P51828 1080 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 ARHGAP8P85298 464 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 COL9A2Q14055 689 aaPredicted RBP7.78□□□□□ -1.16
HDAC1-204ENST00000471488 C15orf39Q6ZRI6 1047 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 PRR23BQ6ZRT6 265 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 ZNF280BQ86YH2 543 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 SUMF1Q8NBK3 374 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 SHDQ96IW2 340 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 LZTS2Q9BRK4 669 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 ZNF577Q9BSK1 485 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 ANO3Q9BYT9 981 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 NAP1L2Q9ULW6 460 aaPredicted RBP7.78□□□□□ -1.16
HDAC1-204ENST00000471488 CEP131Q9UPN4 1083 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 FAN1Q9Y2M0 1017 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 TAF6LQ9Y6J9 622 aa7.78□□□□□ -1.16
HDAC1-204ENST00000471488 ZFHX4Q86UP3 3567 aa7.77□□□□□ -1.16
HDAC1-204ENST00000471488 EPG5Q9HCE0 2579 aa7.77□□□□□ -1.16
HDAC1-204ENST00000471488 C2orf16Q68DN1 1984 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.77□□□□□ -1.17
HDAC1-204ENST00000471488 IPO5O00410 1097 aaKnown RBP7.77□□□□□ -1.17
HDAC1-204ENST00000471488 MAGEB2O15479 319 aa7.77□□□□□ -1.17
HDAC1-204ENST00000471488 PRC1O43663 620 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms