RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 CA12O43570 354 aa28.47■■■□□ 2.15
U2AF1-208ENST00000471250 ARL2P36404 184 aa28.47■■■□□ 2.15
U2AF1-208ENST00000471250 IRF5Q13568 498 aa28.47■■■□□ 2.15
U2AF1-208ENST00000471250 BAG1Q99933 345 aaPredicted RBP28.47■■■□□ 2.15
U2AF1-208ENST00000471250 EXOC7Q9UPT5 735 aa28.47■■■□□ 2.15
U2AF1-208ENST00000471250 SIK3Q9Y2K2 1263 aa28.47■■■□□ 2.15
U2AF1-208ENST00000471250 H0YCG3 227 aa28.46■■■□□ 2.15
U2AF1-208ENST00000471250 RNF225M0QZC1 329 aaPredicted RBP28.46■■■□□ 2.15
U2AF1-208ENST00000471250 STX10O60499 249 aa28.46■■■□□ 2.15
U2AF1-208ENST00000471250 MAFO75444 373 aaPredicted RBP28.46■■■□□ 2.15
U2AF1-208ENST00000471250 MARK3P27448 753 aa28.46■■■□□ 2.15
U2AF1-208ENST00000471250 PSMC2P35998 433 aaKnown RBP28.46■■■□□ 2.15
U2AF1-208ENST00000471250 DUSP28Q4G0W2 176 aa28.46■■■□□ 2.15
U2AF1-208ENST00000471250 FIGNQ5HY92 759 aa28.46■■■□□ 2.15
U2AF1-208ENST00000471250 TMEM143Q96AN5 459 aa28.46■■■□□ 2.15
U2AF1-208ENST00000471250 IQCDQ96DY2 449 aa28.46■■■□□ 2.15
U2AF1-208ENST00000471250 BORCS6Q96GS4 357 aa28.46■■■□□ 2.15
U2AF1-208ENST00000471250 CAPN11Q9UMQ6 739 aa28.46■■■□□ 2.15
U2AF1-208ENST00000471250 DENND3A2RUS2 1198 aa28.45■■■□□ 2.15
U2AF1-208ENST00000471250 ECM2O94769 699 aaPredicted RBP28.45■■■□□ 2.15
U2AF1-208ENST00000471250 SMPD1P17405 629 aa28.45■■■□□ 2.15
U2AF1-208ENST00000471250 ABCD1P33897 745 aa28.45■■■□□ 2.15
U2AF1-208ENST00000471250 KLK7P49862 253 aa28.45■■■□□ 2.15
U2AF1-208ENST00000471250 CYP4F22Q6NT55 531 aa28.45■■■□□ 2.15
U2AF1-208ENST00000471250 MAP4K3Q8IVH8 894 aa28.45■■■□□ 2.15
U2AF1-208ENST00000471250 KCNN1Q92952 543 aa28.45■■■□□ 2.15
U2AF1-208ENST00000471250 KIFC3Q9BVG8 833 aa28.45■■■□□ 2.15
U2AF1-208ENST00000471250 TTYH3Q9C0H2 523 aa28.45■■■□□ 2.15
U2AF1-208ENST00000471250 ZHX1Q9UKY1 873 aaPredicted RBP28.45■■■□□ 2.15
U2AF1-208ENST00000471250 TTC26A0AVF1 554 aa28.45■■■□□ 2.14
U2AF1-208ENST00000471250 PAXIP1Q6ZW49 1069 aaPredicted RBP28.45■■■□□ 2.14
U2AF1-208ENST00000471250 EXOC8Q8IYI6 725 aa28.45■■■□□ 2.14
U2AF1-208ENST00000471250 FAM186BQ8IYM0 893 aa28.45■■■□□ 2.14
U2AF1-208ENST00000471250 PCMTD1Q96MG8 357 aaPredicted RBP28.45■■■□□ 2.14
U2AF1-208ENST00000471250 KCND1Q9NSA2 647 aa28.45■■■□□ 2.14
U2AF1-208ENST00000471250 ARHGAP28Q9P2N2 729 aa28.45■■■□□ 2.14
U2AF1-208ENST00000471250 GJD2Q9UKL4 321 aa28.45■■■□□ 2.14
U2AF1-208ENST00000471250 ADGRA3Q8IWK6 1321 aa28.44■■■□□ 2.14
U2AF1-208ENST00000471250 HBP1O60381 514 aa28.44■■■□□ 2.14
U2AF1-208ENST00000471250 FECHP22830 423 aa28.44■■■□□ 2.14
U2AF1-208ENST00000471250 RGS2P41220 211 aa28.44■■■□□ 2.14
U2AF1-208ENST00000471250 CYP2J2P51589 502 aa28.44■■■□□ 2.14
U2AF1-208ENST00000471250 ASAP3Q8TDY4 903 aa28.44■■■□□ 2.14
U2AF1-208ENST00000471250 AFG1LQ8WV93 481 aa28.44■■■□□ 2.14
U2AF1-208ENST00000471250 SOCS4Q8WXH5 440 aa28.44■■■□□ 2.14
U2AF1-208ENST00000471250 NAA15Q9BXJ9 866 aaKnown RBP28.44■■■□□ 2.14
U2AF1-208ENST00000471250 FLRT1Q9NZU1 646 aa28.44■■■□□ 2.14
U2AF1-208ENST00000471250 FRMD4BQ9Y2L6 1034 aa28.44■■■□□ 2.14
U2AF1-208ENST00000471250 ZBTB42B2RXF5 422 aa28.43■■■□□ 2.14
U2AF1-208ENST00000471250 ARHGAP6O43182 974 aa28.43■■■□□ 2.14
U2AF1-208ENST00000471250 LGALS2P05162 132 aa28.43■■■□□ 2.14
U2AF1-208ENST00000471250 SCP2P22307 547 aa28.43■■■□□ 2.14
U2AF1-208ENST00000471250 GLRA2P23416 452 aa28.43■■■□□ 2.14
U2AF1-208ENST00000471250 KRT9P35527 623 aa28.43■■■□□ 2.14
U2AF1-208ENST00000471250 KCNH2Q12809 1159 aa28.43■■■□□ 2.14
U2AF1-208ENST00000471250 GRM1Q13255 1194 aa28.43■■■□□ 2.14
U2AF1-208ENST00000471250 PPP2R5AQ15172 486 aa28.43■■■□□ 2.14
U2AF1-208ENST00000471250 ABHD10Q9NUJ1 306 aa28.43■■■□□ 2.14
U2AF1-208ENST00000471250 ERAP1Q9NZ08 941 aa28.43■■■□□ 2.14
U2AF1-208ENST00000471250 LUC7L2Q9Y383 392 aaKnown RBP28.43■■■□□ 2.14
U2AF1-208ENST00000471250 GAS2O43903 313 aaKnown RBP28.42■■■□□ 2.14
U2AF1-208ENST00000471250 XRCC5P13010 732 aaKnown RBP28.42■■■□□ 2.14
U2AF1-208ENST00000471250 NAMPTP43490 491 aa28.42■■■□□ 2.14
U2AF1-208ENST00000471250 KCNMA1Q12791 1236 aa28.42■■■□□ 2.14
U2AF1-208ENST00000471250 OLFML2BQ68BL8 750 aa28.42■■■□□ 2.14
U2AF1-208ENST00000471250 IGKV6-21A0A0C4DH24 114 aa28.42■■■□□ 2.14
U2AF1-208ENST00000471250 A0A1W2PQJ5 194 aa28.42■■■□□ 2.14
U2AF1-208ENST00000471250 TNPO2O14787 897 aaKnown RBP28.42■■■□□ 2.14
U2AF1-208ENST00000471250 ALDH1A1P00352 501 aa28.42■■■□□ 2.14
U2AF1-208ENST00000471250 TRIM21P19474 475 aaKnown RBP28.42■■■□□ 2.14
U2AF1-208ENST00000471250 CCDC155Q8N6L0 562 aa28.42■■■□□ 2.14
U2AF1-208ENST00000471250 MGAMO43451 1857 aa28.41■■■□□ 2.14
U2AF1-208ENST00000471250 TISP43B9A030 160 aa28.41■■■□□ 2.14
U2AF1-208ENST00000471250 EXOC3O60645 756 aa28.41■■■□□ 2.14
U2AF1-208ENST00000471250 PPFIA4O75335 1185 aa28.41■■■□□ 2.14
U2AF1-208ENST00000471250 AFPP02771 609 aaKnown RBP28.41■■■□□ 2.14
U2AF1-208ENST00000471250 CYP2B6P20813 491 aa28.41■■■□□ 2.14
U2AF1-208ENST00000471250 IER5Q5VY09 327 aa28.41■■■□□ 2.14
U2AF1-208ENST00000471250 OR6J1Q8NGC5 347 aa28.41■■■□□ 2.14
U2AF1-208ENST00000471250 APBA2Q99767 749 aa28.41■■■□□ 2.14
U2AF1-208ENST00000471250 TRPC6Q9Y210 931 aa28.41■■■□□ 2.14
U2AF1-208ENST00000471250 HOXD8P13378 290 aaPredicted RBP28.4■■■□□ 2.14
U2AF1-208ENST00000471250 NOGQ13253 232 aa28.4■■■□□ 2.14
U2AF1-208ENST00000471250 TAS1R3Q7RTX0 852 aa28.4■■■□□ 2.14
U2AF1-208ENST00000471250 OR8K1Q8NGG5 319 aa28.4■■■□□ 2.14
U2AF1-208ENST00000471250 TCP11Q8WWU5 503 aa28.4■■■□□ 2.14
U2AF1-208ENST00000471250 SLC35C1Q96A29 364 aa28.4■■■□□ 2.14
U2AF1-208ENST00000471250 JPH2Q9BR39 696 aaPredicted RBP28.4■■■□□ 2.14
U2AF1-208ENST00000471250 CBWD1Q9BRT8 395 aa28.4■■■□□ 2.14
U2AF1-208ENST00000471250 MMRN2Q9H8L6 949 aa28.4■■■□□ 2.14
U2AF1-208ENST00000471250 IGHA2P01877 340 aa28.39■■■□□ 2.14
U2AF1-208ENST00000471250 TNFAIP2Q03169 654 aa28.39■■■□□ 2.14
U2AF1-208ENST00000471250 PRAMEF19Q5SWL8 479 aa28.39■■■□□ 2.14
U2AF1-208ENST00000471250 E4F1Q66K89 784 aaPredicted RBP28.39■■■□□ 2.14
U2AF1-208ENST00000471250 DNAJC7Q99615 494 aa28.39■■■□□ 2.14
U2AF1-208ENST00000471250 RNPEPQ9H4A4 650 aa28.39■■■□□ 2.14
U2AF1-208ENST00000471250 PCIF1Q9H4Z3 704 aa28.39■■■□□ 2.14
U2AF1-208ENST00000471250 HSPBP1Q9NZL4 362 aa28.39■■■□□ 2.14
U2AF1-208ENST00000471250 SIP14410 1827 aa28.39■■■□□ 2.14
U2AF1-208ENST00000471250 ANKRD63C9JTQ0 380 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms