RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 KCNA10Q16322 511 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 TMEM132AQ24JP5 1023 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 FAM47CQ5HY64 1035 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 CENPPQ6IPU0 288 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 NFRKBQ6P4R8 1299 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 MTHFD1LQ6UB35 978 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 CXCL17Q6UXB2 119 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 RSPH3Q86UC2 560 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 RHPN2Q8IUC4 686 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 DAW1Q8N136 415 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 LRRC71Q8N4P6 559 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 SCFD1Q8WVM8 642 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 TRAPPC12Q8WVT3 735 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 PRPF31Q8WWY3 499 aaKnown RBP10.74□□□□□ -0.69
CCM2-204ENST00000470837 GLT1D1Q96MS3 346 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 NTPCRQ9BSD7 190 aaKnown RBP10.74□□□□□ -0.69
CCM2-204ENST00000470837 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.74□□□□□ -0.69
CCM2-204ENST00000470837 GBP3Q9H0R5 595 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 ST6GALNAC4Q9H4F1 302 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 XPNPEP1Q9NQW7 623 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 SETD4Q9NVD3 440 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 CGNQ9P2M7 1197 aaKnown RBP10.74□□□□□ -0.69
CCM2-204ENST00000470837 NOD1Q9Y239 953 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 MGAMO43451 1857 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 MCM3APO60318 1980 aa10.74□□□□□ -0.69
CCM2-204ENST00000470837 IGKV6-21A0A0C4DH24 114 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 MYADML2A6NDP7 307 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 ZBTB42B2RXF5 422 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 K7ERI5 159 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 PDXKO00764 312 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 CETN3O15182 167 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 CBFA2T2O43439 604 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 GNA14O95837 355 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 RPLP2P05387 115 aaKnown RBP10.73□□□□□ -0.69
CCM2-204ENST00000470837 SRGAP2CP0DJJ0 459 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 HSPA1AP0DMV8 641 aaKnown RBP10.73□□□□□ -0.69
CCM2-204ENST00000470837 HSPA1BP0DMV9 641 aaKnown RBP10.73□□□□□ -0.69
CCM2-204ENST00000470837 HSPA8P11142 646 aaKnown RBP10.73□□□□□ -0.69
CCM2-204ENST00000470837 CYP2C9P11712 490 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 PHKA2P46019 1235 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 CLCN3P51790 818 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 LBX1P52954 281 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 NCKAP1LP55160 1127 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 SOX10P56693 466 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 SNRPFP62306 86 aaKnown RBP10.73□□□□□ -0.69
CCM2-204ENST00000470837 GTF2BQ00403 316 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 NCBP1Q09161 790 aaKnown RBP10.73□□□□□ -0.69
CCM2-204ENST00000470837 LAMTOR4Q0VGL1 99 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 BMT2Q1RMZ1 405 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 FILIP1LQ4L180 1135 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 ZC2HC1CQ53FD0 456 aaPredicted RBP10.73□□□□□ -0.69
CCM2-204ENST00000470837 ANKRD40Q6AI12 368 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 FBXO46Q6PJ61 603 aaPredicted RBP10.73□□□□□ -0.69
CCM2-204ENST00000470837 FOXR2Q6PJQ5 311 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 EPM2AIP1Q7L775 607 aaPredicted RBP10.73□□□□□ -0.69
CCM2-204ENST00000470837 ZNF710Q8N1W2 664 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 RNF149Q8NC42 400 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 KLHDC9Q8NEP7 349 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 ZNF507Q8TCN5 953 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 NLRP7Q8WX94 980 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 KAT2BQ92831 832 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 NLRP4Q96MN2 994 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 CTAGE1Q96RT6 745 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 CEP89Q96ST8 783 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 TSEN34Q9BSV6 310 aaKnown RBP10.73□□□□□ -0.69
CCM2-204ENST00000470837 SRRTQ9BXP5 876 aaKnown RBP10.73□□□□□ -0.69
CCM2-204ENST00000470837 TRIM5Q9C035 493 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 RNF208Q9H0X6 261 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 THAP9Q9H5L6 903 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 TYW1Q9NV66 732 aaKnown RBP10.73□□□□□ -0.69
CCM2-204ENST00000470837 FANCLQ9NW38 375 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 CASP8AP2Q9UKL3 1982 aa10.73□□□□□ -0.69
CCM2-204ENST00000470837 TRIM49BA6NDI0 452 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 M0QZ92 97 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 HAS3O00219 553 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 PES1O00541 588 aaKnown RBP10.72□□□□□ -0.69
CCM2-204ENST00000470837 MYCP01106 439 aaPredicted RBP10.72□□□□□ -0.69
CCM2-204ENST00000470837 GLRA2P23416 452 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 CASP5P51878 434 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 ACLYP53396 1101 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 ADAM9Q13443 819 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 MAPK6Q16659 721 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 EDRF1Q3B7T1 1238 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 NBPF20Q3BBV1 942 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 CCDC40Q4G0X9 1142 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 TTI2Q6NXR4 508 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 TAF2Q6P1X5 1199 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 TMEM161BQ8NDZ6 487 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 GLIS3Q8NEA6 775 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 ASAP3Q8TDY4 903 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 LMBR1Q8WVP7 490 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 CEP63Q96MT8 703 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 FAM49AQ9H0Q0 323 aaPredicted RBP10.72□□□□□ -0.69
CCM2-204ENST00000470837 UNC93B1Q9H1C4 597 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 SEMA6BQ9H3T3 888 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 HDAC6Q9UBN7 1215 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 TBX20Q9UMR3 447 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 FRMD4BQ9Y2L6 1034 aa10.72□□□□□ -0.69
CCM2-204ENST00000470837 SMIM35A0A1B0GVV1 85 aa10.71□□□□□ -0.69
CCM2-204ENST00000470837 ZSWIM8A7E2V4 1837 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms