RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 ZNF70Q9UC06 446 aaPredicted RBP8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 COL1A1P02452 1464 aaPredicted RBP8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 ZBED9Q6R2W3 1325 aa8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 KIF16BQ96L93 1317 aa8.24□□□□□ -1.09
PTP4A1-202ENST00000470661 TBX1O43435 398 aa8.23□□□□□ -1.09
PTP4A1-202ENST00000470661 STK10O94804 968 aaKnown RBP8.23□□□□□ -1.09
PTP4A1-202ENST00000470661 GNAI3P08754 354 aa8.23□□□□□ -1.09
PTP4A1-202ENST00000470661 ECE1P42892 770 aa8.23□□□□□ -1.09
PTP4A1-202ENST00000470661 RASA3Q14644 834 aa8.23□□□□□ -1.09
PTP4A1-202ENST00000470661 DDR2Q16832 855 aa8.23□□□□□ -1.09
PTP4A1-202ENST00000470661 RCSD1Q6JBY9 416 aa8.23□□□□□ -1.09
PTP4A1-202ENST00000470661 GALNT18Q6P9A2 607 aa8.23□□□□□ -1.09
PTP4A1-202ENST00000470661 ZFPM1Q8IX07 1006 aa8.23□□□□□ -1.09
PTP4A1-202ENST00000470661 FTSJ3Q8IY81 847 aaKnown RBP8.23□□□□□ -1.09
PTP4A1-202ENST00000470661 LPIN2Q92539 896 aa8.23□□□□□ -1.09
PTP4A1-202ENST00000470661 R3HDMLQ9H3Y0 253 aa8.23□□□□□ -1.09
PTP4A1-202ENST00000470661 BACE2Q9Y5Z0 518 aa8.23□□□□□ -1.09
PTP4A1-202ENST00000470661 MYO3BQ8WXR4 1341 aa8.23□□□□□ -1.09
PTP4A1-202ENST00000470661 CASP8AP2Q9UKL3 1982 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 A0A1B0GUL7 405 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 A0A1W2PQ45 241 aaPredicted RBP8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 A0A1W2PQY0 241 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 C2orf71A6NGG8 1288 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 NOP56O00567 594 aaKnown RBP8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 CIAO1O76071 339 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 FARP2O94887 1054 aaPredicted RBP8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 ITGAVP06756 1048 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 PRKCAP17252 672 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 PRDX5P30044 214 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 IL15P40933 162 aaPredicted RBP8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 CTCFP49711 727 aaPredicted RBP8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 MESP2Q0VG99 397 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 ADGRF1Q5T601 910 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 APOBEC3HQ6NTF7 200 aaKnown RBP8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 CYP2R1Q6VVX0 501 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 JAMLQ86YT9 394 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 RASAL3Q86YV0 1011 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 NUP43Q8NFH3 380 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 EPB41L4BQ9H329 900 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 DCP1AQ9NPI6 582 aaPredicted RBP8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 LRP2BPQ9P2M1 347 aa8.22□□□□□ -1.09
PTP4A1-202ENST00000470661 SURF6O75683 361 aaKnown RBP8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 TBC1D8O95759 1140 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 ATP2B1P20020 1258 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 SEPHS1P49903 392 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 ATP8B2P98198 1209 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 MAP2K1Q02750 393 aaPredicted RBP8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 TCP10Q12799 353 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 G3BP1Q13283 466 aaKnown RBP eCLIP8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 RASGRF1Q13972 1273 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 HLA-DQA1Q5Y7H0 255 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 EEF1DP3Q658K8 133 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 GTF2IRD2BQ6EKJ0 949 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 POMZP3Q6PJE2 187 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 MIGA2Q7L4E1 593 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 GTF2IRD2Q86UP8 949 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 ZNF227Q86WZ6 799 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 TRIM59Q8IWR1 403 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 BTN2A2Q8WVV5 523 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 MRGPRX3Q96LB0 322 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 CCDC8Q9H0W5 538 aaPredicted RBP8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 RNF186Q9NXI6 227 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 ABCF2Q9UG63 623 aa8.21□□□□□ -1.1
PTP4A1-202ENST00000470661 ZNF609O15014 1411 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 SSC5DA1L4H1 1573 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 MSL3P1P0C860 447 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 GTF2F1P35269 517 aaKnown RBP eCLIP8.2□□□□□ -1.12e-7■■□□□ 13.2
PTP4A1-202ENST00000470661 MAP2K2P36507 400 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 FKBP1AP62942 108 aaKnown RBP8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 SCRN1Q12765 414 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 OS9Q13438 667 aaPredicted RBP8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 LAPTM5Q13571 262 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 RAB33AQ14088 237 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 CDC42EP5Q6NZY7 148 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 EEPD1Q7L9B9 569 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 ZNF605Q86T29 641 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 IRF2BP1Q8IU81 584 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 APOBEC3FQ8IUX4 373 aaKnown RBP8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 KSR1Q8IVT5 923 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 CRACR2BQ8N4Y2 399 aaPredicted RBP8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 ZNF384Q8TF68 577 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 TEPSINQ96N21 525 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 KRTAP9-2Q9BYQ4 174 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 TRIM55Q9BYV6 548 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 CRTAC1Q9NQ79 661 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 RCAN3Q9UKA8 241 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 EXOC6BQ9Y2D4 811 aa8.2□□□□□ -1.1
PTP4A1-202ENST00000470661 MYO1BO43795 1136 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 PNLIPP16233 465 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 CYP4F8P98187 520 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 NOGQ13253 232 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 MTX1Q13505 466 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 SLC10A6Q3KNW5 377 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 GORABQ5T7V8 394 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 CPNE8Q86YQ8 564 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 CKAP2LQ8IYA6 745 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 SSH3Q8TE77 659 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 TEKT1Q969V4 418 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 IL1RAPL2Q9NP60 686 aa8.19□□□□□ -1.1
PTP4A1-202ENST00000470661 GPRC5CQ9NQ84 441 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms