RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 PEX3P56589 373 aa12.04□□□□□ -0.48
SND1-208ENST00000470463 SP4Q02446 784 aa12.04□□□□□ -0.48
SND1-208ENST00000470463 PTPN14Q15678 1187 aa12.04□□□□□ -0.48
SND1-208ENST00000470463 BRDTQ58F21 947 aaPredicted RBP12.04□□□□□ -0.48
SND1-208ENST00000470463 PLA2G4FQ68DD2 849 aa12.04□□□□□ -0.48
SND1-208ENST00000470463 INTS8Q75QN2 995 aaKnown RBP12.04□□□□□ -0.48
SND1-208ENST00000470463 TMEM139Q8IV31 216 aa12.04□□□□□ -0.48
SND1-208ENST00000470463 REM2Q8IYK8 340 aaPredicted RBP12.04□□□□□ -0.48
SND1-208ENST00000470463 FAM186BQ8IYM0 893 aa12.04□□□□□ -0.48
SND1-208ENST00000470463 CCDC170Q8IYT3 715 aa12.04□□□□□ -0.48
SND1-208ENST00000470463 TXLNBQ8N3L3 684 aa12.04□□□□□ -0.48
SND1-208ENST00000470463 SPATA33Q96N06 139 aa12.04□□□□□ -0.48
SND1-208ENST00000470463 ABHD16BQ9H3Z7 469 aa12.04□□□□□ -0.48
SND1-208ENST00000470463 DHX33Q9H6R0 707 aaKnown RBP12.04□□□□□ -0.48
SND1-208ENST00000470463 AGPAT3Q9NRZ7 376 aa12.04□□□□□ -0.48
SND1-208ENST00000470463 ZNF236Q9UL36 1845 aa12.04□□□□□ -0.48
SND1-208ENST00000470463 MYH11P35749 1972 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 TTC26A0AVF1 554 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 CCDC169A6NNP5 214 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 P4HA2O15460 535 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 PEX10O60683 326 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 IPO7O95373 1038 aaKnown RBP12.03□□□□□ -0.48
SND1-208ENST00000470463 HNRNPH3P31942 346 aaKnown RBP12.03□□□□□ -0.48
SND1-208ENST00000470463 HOXD13P35453 343 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 NPTX2P47972 431 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 FXR1P51114 621 aaKnown RBP eCLIP12.03□□□□□ -0.48
SND1-208ENST00000470463 CETN1Q12798 172 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 KCNH2Q12809 1159 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 MKRN3Q13064 507 aaKnown RBP12.03□□□□□ -0.48
SND1-208ENST00000470463 MXD4Q14582 209 aaPredicted RBP12.03□□□□□ -0.48
SND1-208ENST00000470463 EMC2Q15006 297 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 TAF1CQ15572 869 aaPredicted RBP12.03□□□□□ -0.48
SND1-208ENST00000470463 LY6KQ17RY6 165 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 ZC2HC1CQ53FD0 456 aaPredicted RBP12.03□□□□□ -0.48
SND1-208ENST00000470463 CEP135Q66GS9 1140 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 IQSEC1Q6DN90 963 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 MAP4K3Q8IVH8 894 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 ATP8B4Q8TF62 1192 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 CPLX3Q8WVH0 158 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 SYN2Q92777 582 aaPredicted RBP12.03□□□□□ -0.48
SND1-208ENST00000470463 GLG1Q92896 1179 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 VTI1AQ96AJ9 217 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 PRIMPOLQ96LW4 560 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 GPR20Q99678 358 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 PTPN18Q99952 460 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 TTYH3Q9C0H2 523 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 MMRN2Q9H8L6 949 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 ZFYVE28Q9HCC9 887 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 KIAA1586Q9HCI6 787 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 PLCB1Q9NQ66 1216 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 CEP72Q9P209 647 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 FBXL5Q9UKA1 691 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 MYO6Q9UM54 1294 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 TBX20Q9UMR3 447 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 SIK3Q9Y2K2 1263 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 PAXBP1Q9Y5B6 917 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 MYH9P35579 1960 aaKnown RBP12.03□□□□□ -0.48
SND1-208ENST00000470463 ZMYM2Q9UBW7 1377 aa12.03□□□□□ -0.48
SND1-208ENST00000470463 ASAP2O43150 1006 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 HBP1O60381 514 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 TLR2O60603 784 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 EXOC3O60645 756 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 MAFO75444 373 aaPredicted RBP12.02□□□□□ -0.49
SND1-208ENST00000470463 ALDH1A1P00352 501 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 RFX1P22670 979 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 CYLC1P35663 651 aaPredicted RBP12.02□□□□□ -0.49
SND1-208ENST00000470463 EFNA5P52803 228 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 KRT83P78385 493 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 STRN3Q13033 797 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 TARBP2Q15633 366 aaKnown RBP12.02□□□□□ -0.49
SND1-208ENST00000470463 MEA1Q16626 185 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 MTERF2Q49AM1 385 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 IER5Q5VY09 327 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 E4F1Q66K89 784 aaPredicted RBP12.02□□□□□ -0.49
SND1-208ENST00000470463 GBP6Q6ZN66 633 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 MAEAQ7L5Y9 396 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 EEPD1Q7L9B9 569 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 CACNA2D4Q7Z3S7 1137 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 FBXO16Q8IX29 292 aaPredicted RBP12.02□□□□□ -0.49
SND1-208ENST00000470463 XXYLT1Q8NBI6 393 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 TMEM161BQ8NDZ6 487 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 PPTC7Q8NI37 304 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 SOCS4Q8WXH5 440 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 EEF2KMTQ96G04 330 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.02□□□□□ -0.49
SND1-208ENST00000470463 ERAP1Q9NZ08 941 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 PLAGL2Q9UPG8 496 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 PLXNB2O15031 1838 aa12.02□□□□□ -0.49
SND1-208ENST00000470463 ZNFX1Q9P2E3 1918 aaKnown RBP12.01□□□□□ -0.49
SND1-208ENST00000470463 PMM2O15305 246 aa12.01□□□□□ -0.49
SND1-208ENST00000470463 SLC16A4O15374 487 aa12.01□□□□□ -0.49
SND1-208ENST00000470463 PPFIA4O75335 1185 aa12.01□□□□□ -0.49
SND1-208ENST00000470463 AKAP3O75969 853 aa12.01□□□□□ -0.49
SND1-208ENST00000470463 GARTP22102 1010 aa12.01□□□□□ -0.49
SND1-208ENST00000470463 MCCD1P59942 119 aaPredicted RBP12.01□□□□□ -0.49
SND1-208ENST00000470463 MAP2K5Q13163 448 aa12.01□□□□□ -0.49
SND1-208ENST00000470463 EXOC3L4Q17RC7 722 aa12.01□□□□□ -0.49
SND1-208ENST00000470463 PRPF38BQ5VTL8 546 aaKnown RBP12.01□□□□□ -0.49
SND1-208ENST00000470463 SLFN12LQ6IEE8 588 aa12.01□□□□□ -0.49
SND1-208ENST00000470463 IFNL1Q8IU54 200 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms