RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 SH2B2O14492 632 aaPredicted RBP10.34□□□□□ -0.75
CCDC171-204ENST00000470191 KRT37O76014 449 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 CALM1P0DP23 149 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 CALM2P0DP24 149 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 CALM3P0DP25 149 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 CHMLP26374 656 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 KLRC2P26717 231 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 GBP2P32456 591 aaPredicted RBP10.34□□□□□ -0.75
CCDC171-204ENST00000470191 RNASELQ05823 741 aaKnown RBP10.34□□□□□ -0.75
CCDC171-204ENST00000470191 MMRN1Q13201 1228 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 TTC22Q5TAA0 569 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 JAKMIP3Q5VZ66 844 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 TYW1BQ6NUM6 668 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 TMTC3Q6ZXV5 915 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 OTOP3Q7RTS5 596 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 DCLK2Q8N568 766 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 ST13P5Q8NFI4 369 aaPredicted RBP10.34□□□□□ -0.75
CCDC171-204ENST00000470191 SLC22A17Q8WUG5 538 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 BCL7CQ8WUZ0 217 aaPredicted RBP10.34□□□□□ -0.75
CCDC171-204ENST00000470191 NLRP7Q8WX94 980 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 BBXQ8WY36 941 aaPredicted RBP10.34□□□□□ -0.75
CCDC171-204ENST00000470191 ADAMTS10Q9H324 1103 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 RIC8AQ9NPQ8 531 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 GABBR1Q9UBS5 961 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 DUSP12Q9UNI6 340 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 USTQ9Y2C2 406 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 SLC12A7Q9Y666 1083 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 DMDP11532 3685 aa10.34□□□□□ -0.75
CCDC171-204ENST00000470191 MIA3Q5JRA6 1907 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 DMXL1Q9Y485 3027 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 SMCO2A6NFE2 343 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 FAM86B1E9PN63 330 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 IPO5O00410 1097 aaKnown RBP10.33□□□□□ -0.76
CCDC171-204ENST00000470191 C2CD2LO14523 706 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 DHX15O43143 795 aaKnown RBP10.33□□□□□ -0.76
CCDC171-204ENST00000470191 DCNP07585 359 aaKnown RBP10.33□□□□□ -0.76
CCDC171-204ENST00000470191 FAM86B2P0C5J1 330 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 EIF4BP23588 611 aaKnown RBP10.33□□□□□ -0.76
CCDC171-204ENST00000470191 TMOD1P28289 359 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 MCM5P33992 734 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 GPR149Q86SP6 731 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 FANCBQ8NB91 859 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 IGSF21Q96ID5 467 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 ZNF577Q9BSK1 485 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 MRPL9Q9BYD2 267 aaKnown RBP10.33□□□□□ -0.76
CCDC171-204ENST00000470191 NRDE2Q9H7Z3 1164 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 SFXN1Q9H9B4 322 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 DNAJB4Q9UDY4 337 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 CNTNAP5Q8WYK1 1306 aa10.33□□□□□ -0.76
CCDC171-204ENST00000470191 WDR87Q6ZQQ6 2873 aa10.32□□□□□ -0.76
CCDC171-204ENST00000470191 RIF1Q5UIP0 2472 aaKnown RBP10.32□□□□□ -0.76
CCDC171-204ENST00000470191 A0A0U1RQF3 1178 aa10.32□□□□□ -0.76
CCDC171-204ENST00000470191 KRBA1A5PL33 1030 aa10.32□□□□□ -0.76
CCDC171-204ENST00000470191 MEIS3P2A8K0S8 358 aa10.32□□□□□ -0.76
CCDC171-204ENST00000470191 FOSP01100 380 aaPredicted RBP10.32□□□□□ -0.76
CCDC171-204ENST00000470191 PSAPP07602 524 aa10.32□□□□□ -0.76
CCDC171-204ENST00000470191 CTSAP10619 480 aa10.32□□□□□ -0.76
CCDC171-204ENST00000470191 DARSP14868 501 aaKnown RBP10.32□□□□□ -0.76
CCDC171-204ENST00000470191 SREBF1P36956 1147 aa10.32□□□□□ -0.76
CCDC171-204ENST00000470191 GPC3P51654 580 aa10.32□□□□□ -0.76
CCDC171-204ENST00000470191 TWF2Q6IBS0 349 aaKnown RBP10.32□□□□□ -0.76
CCDC171-204ENST00000470191 DDX53Q86TM3 631 aaKnown RBP10.32□□□□□ -0.76
CCDC171-204ENST00000470191 ZNF598Q86UK7 904 aaKnown RBP10.32□□□□□ -0.76
CCDC171-204ENST00000470191 TMTC2Q8N394 836 aa10.32□□□□□ -0.76
CCDC171-204ENST00000470191 TMEM87BQ96K49 555 aa10.32□□□□□ -0.76
CCDC171-204ENST00000470191 TBC1D17Q9HA65 648 aa10.32□□□□□ -0.76
CCDC171-204ENST00000470191 MAFBQ9Y5Q3 323 aaPredicted RBP10.32□□□□□ -0.76
CCDC171-204ENST00000470191 V9GY48 417 aaPredicted RBP10.32□□□□□ -0.76
CCDC171-204ENST00000470191 FANCMQ8IYD8 2048 aa10.32□□□□□ -0.76
CCDC171-204ENST00000470191 MYH15Q9Y2K3 1946 aa10.32□□□□□ -0.76
CCDC171-204ENST00000470191 COL4A3Q01955 1670 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 IGLV3-22A0A075B6J6 115 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 ADAMTS3O15072 1205 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 MAGEB2O15479 319 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 SGSM2O43147 1006 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 CHMP2AO43633 222 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 N4BP1O75113 896 aaKnown RBP10.31□□□□□ -0.76
CCDC171-204ENST00000470191 GALTP07902 379 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 SLC11A1P49279 550 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 CLCN4P51793 760 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 POLGP54098 1239 aaPredicted RBP10.31□□□□□ -0.76
CCDC171-204ENST00000470191 PTPN14Q15678 1187 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 LETM2Q2VYF4 491 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 NOMO2Q5JPE7 1267 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 SYNE3Q6ZMZ3 975 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 FAM43BQ6ZT52 329 aaPredicted RBP10.31□□□□□ -0.76
CCDC171-204ENST00000470191 NIPA1Q7RTP0 329 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 ZNF280BQ86YH2 543 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 EXOC6Q8TAG9 804 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 MAP4K1Q92918 833 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 CNTNAP3BQ96NU0 1288 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 KLHL5Q96PQ7 755 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 SH2D3AQ9BRG2 576 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 VN1R3Q9BXE9 311 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 EMILIN2Q9BXX0 1053 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 CNTNAP3Q9BZ76 1288 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 MAN1C1Q9NR34 630 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 TBC1D13Q9NVG8 400 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 DACT1Q9NYF0 836 aa10.31□□□□□ -0.76
CCDC171-204ENST00000470191 NAP1L2Q9ULW6 460 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms