RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 FGFR4P22455 802 aa19.63■□□□□ 0.73
COL7A1-208ENST00000470076 SFPQP23246 707 aaKnown RBP eCLIP19.63■□□□□ 0.73
COL7A1-208ENST00000470076 KRT17Q04695 432 aa19.63■□□□□ 0.73
COL7A1-208ENST00000470076 PPP2R5CQ13362 524 aa19.63■□□□□ 0.73
COL7A1-208ENST00000470076 HERC4Q5GLZ8 1057 aaPredicted RBP19.63■□□□□ 0.73
COL7A1-208ENST00000470076 CLLU1OSQ5K130 101 aa19.63■□□□□ 0.73
COL7A1-208ENST00000470076 PPP4R3AQ6IN85 833 aa19.63■□□□□ 0.73
COL7A1-208ENST00000470076 NEK8Q86SG6 692 aa19.63■□□□□ 0.73
COL7A1-208ENST00000470076 ZNF598Q86UK7 904 aaKnown RBP19.63■□□□□ 0.73
COL7A1-208ENST00000470076 RSPH1Q8WYR4 309 aa19.63■□□□□ 0.73
COL7A1-208ENST00000470076 TRAIPQ9BWF2 469 aa19.63■□□□□ 0.73
COL7A1-208ENST00000470076 MRPL9Q9BYD2 267 aaKnown RBP19.63■□□□□ 0.73
COL7A1-208ENST00000470076 KCNMB3Q9NPA1 279 aa19.63■□□□□ 0.73
COL7A1-208ENST00000470076 NGRNQ9NPE2 291 aaKnown RBP19.63■□□□□ 0.73
COL7A1-208ENST00000470076 SPG21Q9NZD8 308 aa19.63■□□□□ 0.73
COL7A1-208ENST00000470076 A0A087WZ62 844 aa19.62■□□□□ 0.73
COL7A1-208ENST00000470076 PFKFB2O60825 505 aa19.62■□□□□ 0.73
COL7A1-208ENST00000470076 CSDE1O75534 798 aaKnown RBP19.62■□□□□ 0.73
COL7A1-208ENST00000470076 NEFLP07196 543 aa19.62■□□□□ 0.73
COL7A1-208ENST00000470076 SRGAP2BP0DMP2 458 aa19.62■□□□□ 0.73
COL7A1-208ENST00000470076 ANO5Q75V66 913 aa19.62■□□□□ 0.73
COL7A1-208ENST00000470076 RNF135Q8IUD6 432 aa19.62■□□□□ 0.73
COL7A1-208ENST00000470076 NAP1L4Q99733 375 aaKnown RBP19.62■□□□□ 0.73
COL7A1-208ENST00000470076 TCF25Q9BQ70 676 aa19.62■□□□□ 0.73
COL7A1-208ENST00000470076 SH2D3AQ9BRG2 576 aa19.62■□□□□ 0.73
COL7A1-208ENST00000470076 FDXACB1Q9BRP7 624 aaPredicted RBP19.62■□□□□ 0.73
COL7A1-208ENST00000470076 ENTPD7Q9NQZ7 604 aa19.62■□□□□ 0.73
COL7A1-208ENST00000470076 SUCLA2Q9P2R7 463 aaPredicted RBP19.62■□□□□ 0.73
COL7A1-208ENST00000470076 USP15Q9Y4E8 981 aaPredicted RBP19.62■□□□□ 0.73
COL7A1-208ENST00000470076 SKIP12755 728 aa19.61■□□□□ 0.73
COL7A1-208ENST00000470076 ATF7P17544 494 aaPredicted RBP19.61■□□□□ 0.73
COL7A1-208ENST00000470076 QARSP47897 775 aaKnown RBP19.61■□□□□ 0.73
COL7A1-208ENST00000470076 PLPP4Q5VZY2 271 aa19.61■□□□□ 0.73
COL7A1-208ENST00000470076 TMEM184AQ6ZMB5 413 aa19.61■□□□□ 0.73
COL7A1-208ENST00000470076 RHPN2Q8IUC4 686 aa19.61■□□□□ 0.73
COL7A1-208ENST00000470076 VN1R2Q8NFZ6 395 aa19.61■□□□□ 0.73
COL7A1-208ENST00000470076 HELQQ8TDG4 1101 aa19.61■□□□□ 0.73
COL7A1-208ENST00000470076 MUTYHQ9UIF7 546 aa19.61■□□□□ 0.73
COL7A1-208ENST00000470076 VAV3Q9UKW4 847 aa19.61■□□□□ 0.73
COL7A1-208ENST00000470076 PPME1Q9Y570 386 aa19.61■□□□□ 0.73
COL7A1-208ENST00000470076 LOC730098B7Z3J9 87 aa19.6■□□□□ 0.73
COL7A1-208ENST00000470076 EML1O00423 815 aa19.6■□□□□ 0.73
COL7A1-208ENST00000470076 TBX3O15119 743 aa19.6■□□□□ 0.73
COL7A1-208ENST00000470076 PBX3P40426 434 aa19.6■□□□□ 0.73
COL7A1-208ENST00000470076 PHKA2P46019 1235 aa19.6■□□□□ 0.73
COL7A1-208ENST00000470076 ANAPC15P60006 121 aa19.6■□□□□ 0.73
COL7A1-208ENST00000470076 KCNC3Q14003 757 aa19.6■□□□□ 0.73
COL7A1-208ENST00000470076 ANKRD1Q15327 319 aa19.6■□□□□ 0.73
COL7A1-208ENST00000470076 TMC7Q7Z402 723 aa19.6■□□□□ 0.73
COL7A1-208ENST00000470076 EXOC8Q8IYI6 725 aa19.6■□□□□ 0.73
COL7A1-208ENST00000470076 SLC39A11Q8N1S5 342 aa19.6■□□□□ 0.73
COL7A1-208ENST00000470076 PHF7Q9BWX1 381 aaPredicted RBP19.6■□□□□ 0.73
COL7A1-208ENST00000470076 CYP26B1Q9NR63 512 aa19.6■□□□□ 0.73
COL7A1-208ENST00000470076 TPCN1Q9ULQ1 816 aa19.6■□□□□ 0.73
COL7A1-208ENST00000470076 PIEZO1Q92508 2521 aa19.6■□□□□ 0.73
COL7A1-208ENST00000470076 CARNS1A5YM72 827 aa19.59■□□□□ 0.73
COL7A1-208ENST00000470076 CCNT1O60563 726 aaKnown RBP19.59■□□□□ 0.73
COL7A1-208ENST00000470076 P4HBP07237 508 aaKnown RBP19.59■□□□□ 0.73
COL7A1-208ENST00000470076 ALDH7A1P49419 539 aaKnown RBP19.59■□□□□ 0.73
COL7A1-208ENST00000470076 RBM10P98175 930 aaKnown RBP19.59■□□□□ 0.73
COL7A1-208ENST00000470076 CBX2Q14781 532 aaPredicted RBP19.59■□□□□ 0.73
COL7A1-208ENST00000470076 PLA2G4FQ68DD2 849 aa19.59■□□□□ 0.73
COL7A1-208ENST00000470076 TWF2Q6IBS0 349 aaKnown RBP19.59■□□□□ 0.73
COL7A1-208ENST00000470076 PIK3AP1Q6ZUJ8 805 aa19.59■□□□□ 0.73
COL7A1-208ENST00000470076 SLC7A3Q8WY07 619 aa19.59■□□□□ 0.73
COL7A1-208ENST00000470076 SUSD6Q92537 303 aa19.59■□□□□ 0.73
COL7A1-208ENST00000470076 WASF1Q92558 559 aa19.59■□□□□ 0.73
COL7A1-208ENST00000470076 NLRP4Q96MN2 994 aa19.59■□□□□ 0.73
COL7A1-208ENST00000470076 PIN4Q9Y237 131 aaKnown RBP19.59■□□□□ 0.73
COL7A1-208ENST00000470076 HIDE1A8MVS5 230 aa19.58■□□□□ 0.72
COL7A1-208ENST00000470076 MARCH6O60337 910 aa19.58■□□□□ 0.72
COL7A1-208ENST00000470076 RAB27AP51159 221 aa19.58■□□□□ 0.72
COL7A1-208ENST00000470076 CATSPER4Q7RTX7 472 aa19.58■□□□□ 0.72
COL7A1-208ENST00000470076 OXER1Q8TDS5 423 aa19.58■□□□□ 0.72
COL7A1-208ENST00000470076 HAS1Q92839 578 aa19.58■□□□□ 0.72
COL7A1-208ENST00000470076 GJB4Q9NTQ9 266 aa19.58■□□□□ 0.72
COL7A1-208ENST00000470076 ORC3Q9UBD5 711 aaPredicted RBP19.58■□□□□ 0.72
COL7A1-208ENST00000470076 COL4A3BPQ9Y5P4 624 aa19.58■□□□□ 0.72
COL7A1-208ENST00000470076 TECTAO75443 2155 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 ZNF623O75123 536 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 CTDNEP1O95476 244 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 HOXB8P17481 243 aaPredicted RBP19.57■□□□□ 0.72
COL7A1-208ENST00000470076 HOXD11P31277 338 aaPredicted RBP19.57■□□□□ 0.72
COL7A1-208ENST00000470076 RFC5P40937 340 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 TECP42680 631 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 POLGP54098 1239 aaPredicted RBP19.57■□□□□ 0.72
COL7A1-208ENST00000470076 NPEPPSP55786 919 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 BCAR1P56945 870 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 SMC1AQ14683 1233 aaKnown RBP19.57■□□□□ 0.72
COL7A1-208ENST00000470076 BMS1Q14692 1282 aaKnown RBP19.57■□□□□ 0.72
COL7A1-208ENST00000470076 EPHA7Q15375 998 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 ANKRD54Q6NXT1 300 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 GLB1LQ6UWU2 654 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 KSR1Q8IVT5 923 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 C4orf19Q8IY42 314 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 SLFN12Q8IYM2 578 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 MRPL43Q8N983 215 aaKnown RBP19.57■□□□□ 0.72
COL7A1-208ENST00000470076 EDAQ92838 391 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 TMEM169Q96HH4 297 aa19.57■□□□□ 0.72
COL7A1-208ENST00000470076 CEP170P1Q96L14 293 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms