RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 C3orf20Q8ND61 904 aa14.82□□□□□ -0.04
BRCA1-209ENST00000470026 BBXQ8WY36 941 aaPredicted RBP14.82□□□□□ -0.04
BRCA1-209ENST00000470026 RANBP17Q9H2T7 1088 aaKnown RBP14.82□□□□□ -0.04
BRCA1-209ENST00000470026 RABEP2Q9H5N1 569 aa14.82□□□□□ -0.04
BRCA1-209ENST00000470026 SAMM50Q9Y512 469 aa14.82□□□□□ -0.04
BRCA1-209ENST00000470026 GOLGA6L10A6NI86 522 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 TTI1O43156 1089 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 VIL1P09327 827 aaKnown RBP14.81□□□□□ -0.04
BRCA1-209ENST00000470026 POLR2MP0CAP2 368 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 CTNNA1P35221 906 aaKnown RBP14.81□□□□□ -0.04
BRCA1-209ENST00000470026 RBM5P52756 815 aaKnown RBP eCLIP14.81□□□□□ -0.04
BRCA1-209ENST00000470026 PTPROQ16827 1216 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 KIAA1755Q5JYT7 1200 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 FAM178BQ8IXR5 827 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 MYCBPAPQ8TBZ2 947 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 ATP8B4Q8TF62 1192 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 ZNF473Q8WTR7 871 aaKnown RBP14.81□□□□□ -0.04
BRCA1-209ENST00000470026 WDR11Q9BZH6 1224 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 DEFB129Q9H1M3 183 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 TRPC5Q9UL62 973 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-209ENST00000470026 FRMD4BQ9Y2L6 1034 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 TMX2Q9Y320 296 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 ANKRD62A6NC57 917 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 PLA2G6O60733 806 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 PPFIA2O75334 1257 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 FAM107AO95990 144 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 PAEPP09466 180 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 MCCD1P59942 119 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-209ENST00000470026 MYL7Q01449 175 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 BFSP1Q12934 665 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 CEP55Q53EZ4 464 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 SLC30A10Q6XR72 485 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 NLRP14Q86W24 1093 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 COL23A1Q86Y22 540 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-209ENST00000470026 KSR1Q8IVT5 923 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 CTNNBL1Q8WYA6 563 aaPredicted RBP14.81□□□□□ -0.04
BRCA1-209ENST00000470026 VTI1AQ96AJ9 217 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 CCT8L2Q96SF2 557 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 UNC45AQ9H3U1 944 aa14.81□□□□□ -0.04
BRCA1-209ENST00000470026 TDRD3Q9H7E2 651 aaKnown RBP14.81□□□□□ -0.04
BRCA1-209ENST00000470026 HERC5Q9UII4 1024 aaKnown RBP14.81□□□□□ -0.04
BRCA1-209ENST00000470026 MYH11P35749 1972 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 MEFVO15553 781 aaPredicted RBP14.8□□□□□ -0.04
BRCA1-209ENST00000470026 GAS7O60861 476 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 ERLIN2O94905 339 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 FGGP02679 453 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 SETQ01105 290 aaPredicted RBP14.8□□□□□ -0.04
BRCA1-209ENST00000470026 CLUL1Q15846 466 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 PHLDB3Q6NSJ2 640 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 C12orf56Q8IXR9 622 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 DAW1Q8N136 415 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 ARHGEF26Q96DR7 871 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 UTP11Q9Y3A2 253 aaKnown RBP14.8□□□□□ -0.04
BRCA1-209ENST00000470026 NR2E1Q9Y466 385 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 FAM187AA6NFU0 413 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 P4HA2O15460 535 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 TRIM37O94972 964 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 CFBP00751 764 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 TRIM49P0CI25 452 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 TRIM49CP0CI26 452 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 MAPTP10636 758 aaKnown RBP14.8□□□□□ -0.04
BRCA1-209ENST00000470026 DRG2P55039 364 aaKnown RBP14.8□□□□□ -0.04
BRCA1-209ENST00000470026 ODR4Q5SWX8 454 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 DUPD1Q68J44 220 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 PROCA1Q8NCQ7 364 aaPredicted RBP14.8□□□□□ -0.04
BRCA1-209ENST00000470026 OR2W6PQ8NHA6 318 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 NEK9Q8TD19 979 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 AKT1S1Q96B36 256 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 NAP1L3Q99457 506 aaPredicted RBP14.8□□□□□ -0.04
BRCA1-209ENST00000470026 CELF4Q9BZC1 486 aaKnown RBP14.8□□□□□ -0.04
BRCA1-209ENST00000470026 EHMT1Q9H9B1 1298 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 COG5Q9UP83 839 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 USP20Q9Y2K6 914 aa14.8□□□□□ -0.04
BRCA1-209ENST00000470026 TNFAIP3P21580 790 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 ECE1P42892 770 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 CYP2J2P51589 502 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 C11orf63Q6NUN7 778 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 C6orf89Q6UWU4 347 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 MICALCLQ6ZW33 695 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 PALB2Q86YC2 1186 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 RHOT2Q8IXI1 618 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 SPICE1Q8N0Z3 855 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 MICALL1Q8N3F8 863 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 KAT2BQ92831 832 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 RIT2Q99578 217 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 RAB17Q9H0T7 212 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 THAP2Q9H0W7 228 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 ARHGEF10LQ9HCE6 1279 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 ZDHHC18Q9NUE0 388 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.79□□□□□ -0.04
BRCA1-209ENST00000470026 TAS2R14Q9NYV8 317 aa14.79□□□□□ -0.04
BRCA1-209ENST00000470026 FOXN3O00409 490 aaPredicted RBP14.78□□□□□ -0.04
BRCA1-209ENST00000470026 CHMP2AO43633 222 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 FSBPO95073 299 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 ARP10275 920 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 INPP5BP32019 993 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 FNTAP49354 379 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 LIG3P49916 1009 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 CC2D2BQ6DHV5 1058 aa14.78□□□□□ -0.04
BRCA1-209ENST00000470026 SUGP1Q8IWZ8 645 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms