RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 NEK9Q8TD19 979 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 POF1BQ8WVV4 589 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 PSPC1Q8WXF1 523 aaKnown RBP8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 C8orf76Q96K31 380 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 NLRP4Q96MN2 994 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 EIF2AK1Q9BQI3 630 aaKnown RBP8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 TMEM117Q9H0C3 514 aa8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 TTC12Q9H892 705 aaPredicted RBP8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 WRAP73Q9P2S5 460 aaPredicted RBP8.03□□□□□ -1.12
SNRPD3-205ENST00000468770 RALGAPA2Q2PPJ7 1873 aa8.02□□□□□ -1.12
SNRPD3-205ENST00000468770 NLRC5Q86WI3 1866 aa8.02□□□□□ -1.12
SNRPD3-205ENST00000468770 ZBTB39O15060 712 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 ASAP2O43150 1006 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 GAS2O43903 313 aaKnown RBP8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 FGF18O76093 207 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 SRGAP2CP0DJJ0 459 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 SKIP12755 728 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 LAG3P18627 525 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 DNAJB1P25685 340 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 MCM7P33993 719 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 RBM25P49756 843 aaKnown RBP8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 HMGN5P82970 282 aaKnown RBP8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 UBE3AQ05086 875 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 SPIRE1Q08AE8 756 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 ST3GAL1Q11201 340 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 HYAL1Q12794 435 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 TWF2Q6IBS0 349 aaKnown RBP8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 LRRC43Q8N309 656 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 COLGALT1Q8NBJ5 622 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 TCP11Q8WWU5 503 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 PRPF31Q8WWY3 499 aaKnown RBP8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 TMEM143Q96AN5 459 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 CCDC43Q96MW1 224 aaKnown RBP8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 CASD1Q96PB1 797 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 HSD17B14Q9BPX1 270 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 DHX33Q9H6R0 707 aaKnown RBP8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 SH2B1Q9NRF2 756 aaPredicted RBP8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 BMP2KQ9NSY1 1161 aaPredicted RBP8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 PUF60Q9UHX1 559 aaKnown RBP8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 PIN4Q9Y237 131 aaKnown RBP8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 FAM50BQ9Y247 325 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 COL4A3BPQ9Y5P4 624 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 REV3LO60673 3130 aa8.02□□□□□ -1.13
SNRPD3-205ENST00000468770 GRXCR2A6NFK2 248 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 WNT7AO00755 349 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 LYPLA2O95372 231 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 IL9P15248 144 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 GTF2F1P35269 517 aaKnown RBP eCLIP8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 IRS1P35568 1242 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 LTBRP36941 435 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 PHKA2P46019 1235 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 NDUFV1P49821 464 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 KRT17Q04695 432 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 NCBP1Q09161 790 aaKnown RBP8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 LAMTOR4Q0VGL1 99 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 ADAM15Q13444 863 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 MXD4Q14582 209 aaPredicted RBP8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 COL19A1Q14993 1142 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 EMC2Q15006 297 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 ZNF174Q15697 407 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 CTC1Q2NKJ3 1217 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 LONRF3Q496Y0 759 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 KCNT2Q6UVM3 1135 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 LRRC55Q6ZSA7 311 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 SRGAP1Q7Z6B7 1085 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 RBM23Q86U06 439 aaKnown RBP8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 ZNF598Q86UK7 904 aaKnown RBP8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 FERMT3Q86UX7 667 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 RNF149Q8NC42 400 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 FBXO18Q8NFZ0 1043 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 HELQQ8TDG4 1101 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 ZNF558Q96NG5 402 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 MTMR9Q96QG7 549 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 KIF2CQ99661 725 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 MTRQ99707 1265 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 TRAIPQ9BWF2 469 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 MRPL9Q9BYD2 267 aaKnown RBP8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 FOXP1Q9H334 677 aaPredicted RBP8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 CWH43Q9H720 699 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 UPF2Q9HAU5 1272 aaKnown RBP8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 IFT122Q9HBG6 1241 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 TLR9Q9NR96 1032 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 ANKEF1Q9NU02 776 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 HCSTQ9UBK5 93 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 MUC3AQ02505 3323 aa8.01□□□□□ -1.13
SNRPD3-205ENST00000468770 POTEMA6NI47 508 aa8□□□□□ -1.13
SNRPD3-205ENST00000468770 ST18O60284 1047 aa8□□□□□ -1.13
SNRPD3-205ENST00000468770 ZNF623O75123 536 aa8□□□□□ -1.13
SNRPD3-205ENST00000468770 DGAT1O75907 488 aa8□□□□□ -1.13
SNRPD3-205ENST00000468770 XRCC6P12956 609 aaKnown RBP eCLIP8□□□□□ -1.13
SNRPD3-205ENST00000468770 SSTR3P32745 418 aaPredicted RBP8□□□□□ -1.13
SNRPD3-205ENST00000468770 PPM1AP35813 382 aa8□□□□□ -1.13
SNRPD3-205ENST00000468770 TECP42680 631 aa8□□□□□ -1.13
SNRPD3-205ENST00000468770 NRIP1P48552 1158 aa8□□□□□ -1.13
SNRPD3-205ENST00000468770 ALDH7A1P49419 539 aaKnown RBP8□□□□□ -1.13
SNRPD3-205ENST00000468770 RAB27AP51159 221 aa8□□□□□ -1.13
SNRPD3-205ENST00000468770 ERVFC1P60507 584 aa8□□□□□ -1.13
SNRPD3-205ENST00000468770 PLCB3Q01970 1234 aa8□□□□□ -1.13
SNRPD3-205ENST00000468770 DLX2Q07687 328 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms