RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ZBED3Q96IU2 234 aaPredicted RBP4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 HRASLS5Q96KN8 279 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 TRIM55Q9BYV6 548 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 GPR62Q9BZJ7 368 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 TM6SF1Q9BZW5 370 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 DEFB129Q9H1M3 183 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 DHX36Q9H2U1 1008 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 TRIT1Q9H3H1 467 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 ZNF287Q9HBT7 754 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 GGA3Q9NZ52 723 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 PRR13Q9NZ81 148 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 ZSWIM5Q9P217 1185 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 PI4KBQ9UBF8 816 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 ANAPC4Q9UJX5 808 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 PCDHB10Q9UN67 800 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 FZD1Q9UP38 647 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 PCDHB12Q9Y5F1 795 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 ADAMTSL1Q8N6G6 1762 aa4.76□□□□□ -1.65
TMEM39A-204ENST00000468545 ZMYM6O95789 1325 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 PITPNM2Q9BZ72 1349 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 SBF1O95248 1867 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 IQCA1LA6NCM1 817 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 CCDC69A6NI79 296 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 ADM5C9JUS6 153 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 SHOXO15266 292 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 NMT2O60551 498 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 MED26O95402 600 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 TP53P04637 393 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 SRFP11831 508 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 AKR1B1P15121 316 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 ANTXR2P58335 489 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 CCT2P78371 535 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 EXOSC10Q01780 885 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 PRKCQQ04759 706 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 TNFAIP1Q13829 316 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 WTAPQ15007 396 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 SART3Q15020 963 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 DDR2Q16832 855 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 CERKLQ49MI3 558 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 ANKRD39Q53RE8 183 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 AXDND1Q5T1B0 1012 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 C6orf15Q6UXA7 325 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 SYNE3Q6ZMZ3 975 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 C16orf86Q6ZW13 317 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 USP50Q70EL3 339 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 VSIG10LQ86VR7 867 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 APOBEC3FQ8IUX4 373 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 FAM178BQ8IXR5 827 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 C7orf61Q8IZ16 206 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 ENOX1Q8TC92 643 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 NUP133Q8WUM0 1156 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 ASB11Q8WXH4 323 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 HSPA12BQ96MM6 686 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 IPO9Q96P70 1041 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 UBAC1Q9BSL1 405 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 ASCC2Q9H1I8 757 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 TAF1DQ9H5J8 278 aaPredicted RBP4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 CABP5Q9NP86 173 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 NMRK2Q9NPI5 230 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 FAM86C1Q9NVL1 165 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 GPATCH2Q9NW75 528 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 SWAP70Q9UH65 585 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 SERPINB13Q9UIV8 391 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 VAV3Q9UKW4 847 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 ISY1Q9ULR0 285 aaKnown RBP4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 LIMCH1Q9UPQ0 1083 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 CNTNAP1P78357 1384 aa4.75□□□□□ -1.65
TMEM39A-204ENST00000468545 BAZ2AQ9UIF9 1905 aaKnown RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 MAST2Q6P0Q8 1798 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 KLF18A0A0U1RQI7 1052 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 B2RBV5 119 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 H3BS24 57 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 RBAK-RBAKDNI3L0D1 243 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 SH2B2O14492 632 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 SIGLEC6O43699 453 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 ORC4O43929 436 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 LARGE1O95461 756 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 NAT2P11245 290 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 VEGFAP15692 232 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 RXRAP19793 462 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 SHMT1P34896 483 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 MCM2P49736 904 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 ZNF143P52747 638 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 SNW1Q13573 536 aaKnown RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 TOB2Q14106 344 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 RRP1BQ14684 758 aaKnown RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 RAB3GAP1Q15042 981 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 ANKRD1Q15327 319 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 ABCB5Q2M3G0 1257 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 SHROOM1Q2M3G4 852 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 SUPT20HL1Q3ZLR7 823 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 IFIT1BQ5T764 474 aaKnown RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 FKBP1CQ5VVH2 108 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 DCAF15Q66K64 600 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 HEATR6Q6AI08 1181 aaKnown RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 KIAA1211LQ6NV74 962 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 KRT26Q7Z3Y9 468 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 FAM83AQ86UY5 434 aa4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 PNMA8AQ86V59 439 aaPredicted RBP4.74□□□□□ -1.65
TMEM39A-204ENST00000468545 IQCA1Q86XH1 822 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms