RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 BLIDQ8IZY5 108 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 HELQQ8TDG4 1101 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 PBXIP1Q96AQ6 731 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 NIFKQ9BYG3 293 aaKnown RBP19.42■□□□□ 0.7
TRIM56-203ENST00000467847 GCOM2Q9BZD3 368 aaPredicted RBP19.42■□□□□ 0.7
TRIM56-203ENST00000467847 ZSWIM6Q9HCJ5 1215 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 CYP46A1Q9Y6A2 500 aa19.42■□□□□ 0.7
TRIM56-203ENST00000467847 TMEM221A6NGB7 291 aa19.41■□□□□ 0.7
TRIM56-203ENST00000467847 M0R296 226 aa19.41■□□□□ 0.7
TRIM56-203ENST00000467847 ZXDAP98168 799 aa19.41■□□□□ 0.7
TRIM56-203ENST00000467847 CDC42EP1Q00587 391 aa19.41■□□□□ 0.7
TRIM56-203ENST00000467847 ZNF598Q86UK7 904 aaKnown RBP19.41■□□□□ 0.7
TRIM56-203ENST00000467847 PRSS33Q8NF86 280 aa19.41■□□□□ 0.7
TRIM56-203ENST00000467847 SH2D3AQ9BRG2 576 aa19.41■□□□□ 0.7
TRIM56-203ENST00000467847 APOL5Q9BWW9 433 aa19.41■□□□□ 0.7
TRIM56-203ENST00000467847 MRPL9Q9BYD2 267 aaKnown RBP19.41■□□□□ 0.7
TRIM56-203ENST00000467847 S1PR5Q9H228 398 aa19.41■□□□□ 0.7
TRIM56-203ENST00000467847 ZDBF2Q9HCK1 2354 aa19.41■□□□□ 0.7
TRIM56-203ENST00000467847 DDX11L8A8MPP1 907 aa19.4■□□□□ 0.7
TRIM56-203ENST00000467847 M0R2N6 131 aa19.4■□□□□ 0.7
TRIM56-203ENST00000467847 SFPQP23246 707 aaKnown RBP eCLIP19.4■□□□□ 0.7
TRIM56-203ENST00000467847 ALDH7A1P49419 539 aaKnown RBP19.4■□□□□ 0.7
TRIM56-203ENST00000467847 STK3Q13188 491 aa19.4■□□□□ 0.7
TRIM56-203ENST00000467847 SMC1AQ14683 1233 aaKnown RBP19.4■□□□□ 0.7
TRIM56-203ENST00000467847 B3GNT9Q6UX72 402 aa19.4■□□□□ 0.7
TRIM56-203ENST00000467847 SLC39A11Q8N1S5 342 aa19.4■□□□□ 0.7
TRIM56-203ENST00000467847 DAGLBQ8NCG7 672 aa19.4■□□□□ 0.7
TRIM56-203ENST00000467847 ETNPPLQ8TBG4 499 aa19.4■□□□□ 0.7
TRIM56-203ENST00000467847 ZNF274Q96GC6 653 aaPredicted RBP19.4■□□□□ 0.7
TRIM56-203ENST00000467847 LARP6Q9BRS8 491 aaKnown RBP19.4■□□□□ 0.7
TRIM56-203ENST00000467847 CHST12Q9NRB3 414 aa19.4■□□□□ 0.7
TRIM56-203ENST00000467847 DDX25Q9UHL0 483 aaKnown RBP19.4■□□□□ 0.7
TRIM56-203ENST00000467847 A0A087WZ62 844 aa19.39■□□□□ 0.69
TRIM56-203ENST00000467847 IGKV6-21A0A0C4DH24 114 aa19.39■□□□□ 0.69
TRIM56-203ENST00000467847 STBD1O95210 358 aa19.39■□□□□ 0.69
TRIM56-203ENST00000467847 HOXB8P17481 243 aaPredicted RBP19.39■□□□□ 0.69
TRIM56-203ENST00000467847 NONOQ15233 471 aaKnown RBP eCLIP19.39■□□□□ 0.69
TRIM56-203ENST00000467847 GALNT17Q6IS24 598 aa19.39■□□□□ 0.69
TRIM56-203ENST00000467847 SYCE2Q6PIF2 218 aa19.39■□□□□ 0.69
TRIM56-203ENST00000467847 CPLX2Q6PUV4 134 aaKnown RBP19.39■□□□□ 0.69
TRIM56-203ENST00000467847 MOXD1Q6UVY6 613 aa19.39■□□□□ 0.69
TRIM56-203ENST00000467847 BMP8AQ7Z5Y6 402 aa19.39■□□□□ 0.69
TRIM56-203ENST00000467847 RHPN2Q8IUC4 686 aa19.39■□□□□ 0.69
TRIM56-203ENST00000467847 MBOAT7Q96N66 472 aa19.39■□□□□ 0.69
TRIM56-203ENST00000467847 AIFM3Q96NN9 605 aa19.39■□□□□ 0.69
TRIM56-203ENST00000467847 CEP89Q96ST8 783 aa19.39■□□□□ 0.69
TRIM56-203ENST00000467847 FDXACB1Q9BRP7 624 aaPredicted RBP19.39■□□□□ 0.69
TRIM56-203ENST00000467847 SUCLA2Q9P2R7 463 aaPredicted RBP19.39■□□□□ 0.69
TRIM56-203ENST00000467847 EPB41L2O43491 1005 aaKnown RBP19.38■□□□□ 0.69
TRIM56-203ENST00000467847 CA8P35219 290 aa19.38■□□□□ 0.69
TRIM56-203ENST00000467847 PHKA2P46019 1235 aa19.38■□□□□ 0.69
TRIM56-203ENST00000467847 BCAR1P56945 870 aa19.38■□□□□ 0.69
TRIM56-203ENST00000467847 PSMC5P62195 406 aa19.38■□□□□ 0.69
TRIM56-203ENST00000467847 NPY5RQ15761 445 aa19.38■□□□□ 0.69
TRIM56-203ENST00000467847 INF2Q27J81 1249 aa19.38■□□□□ 0.69
TRIM56-203ENST00000467847 IER5LQ5T953 404 aa19.38■□□□□ 0.69
TRIM56-203ENST00000467847 TWF2Q6IBS0 349 aaKnown RBP19.38■□□□□ 0.69
TRIM56-203ENST00000467847 KRT25Q7Z3Z0 450 aa19.38■□□□□ 0.69
TRIM56-203ENST00000467847 ZNF410Q86VK4 478 aa19.38■□□□□ 0.69
TRIM56-203ENST00000467847 FAM177A1Q8N128 213 aaPredicted RBP19.38■□□□□ 0.69
TRIM56-203ENST00000467847 MRPL43Q8N983 215 aaKnown RBP19.38■□□□□ 0.69
TRIM56-203ENST00000467847 CASP10Q92851 521 aa19.38■□□□□ 0.69
TRIM56-203ENST00000467847 INO80BQ9C086 356 aaPredicted RBP19.38■□□□□ 0.69
TRIM56-203ENST00000467847 PIN4Q9Y237 131 aaKnown RBP19.38■□□□□ 0.69
TRIM56-203ENST00000467847 C2orf71A6NGG8 1288 aa19.37■□□□□ 0.69
TRIM56-203ENST00000467847 NT5C1B-RDH14C9J2C7 533 aa19.37■□□□□ 0.69
TRIM56-203ENST00000467847 MAFO75444 373 aaPredicted RBP19.37■□□□□ 0.69
TRIM56-203ENST00000467847 BMS1Q14692 1282 aaKnown RBP19.37■□□□□ 0.69
TRIM56-203ENST00000467847 LETM2Q2VYF4 491 aa19.37■□□□□ 0.69
TRIM56-203ENST00000467847 LONRF3Q496Y0 759 aa19.37■□□□□ 0.69
TRIM56-203ENST00000467847 TPRNQ4KMQ1 711 aa19.37■□□□□ 0.69
TRIM56-203ENST00000467847 PLA2G4FQ68DD2 849 aa19.37■□□□□ 0.69
TRIM56-203ENST00000467847 ANO5Q75V66 913 aa19.37■□□□□ 0.69
TRIM56-203ENST00000467847 RSPH1Q8WYR4 309 aa19.37■□□□□ 0.69
TRIM56-203ENST00000467847 TMEM169Q96HH4 297 aa19.37■□□□□ 0.69
TRIM56-203ENST00000467847 NLRP4Q96MN2 994 aa19.37■□□□□ 0.69
TRIM56-203ENST00000467847 TRAIPQ9BWF2 469 aa19.37■□□□□ 0.69
TRIM56-203ENST00000467847 TM6SF1Q9BZW5 370 aa19.37■□□□□ 0.69
TRIM56-203ENST00000467847 SLC37A4O43826 429 aa19.36■□□□□ 0.69
TRIM56-203ENST00000467847 GFRA3O60609 400 aa19.36■□□□□ 0.69
TRIM56-203ENST00000467847 ZC3H11AO75152 810 aaKnown RBP eCLIP19.36■□□□□ 0.69
TRIM56-203ENST00000467847 SKIP12755 728 aa19.36■□□□□ 0.69
TRIM56-203ENST00000467847 SP100P23497 879 aaPredicted RBP19.36■□□□□ 0.69
TRIM56-203ENST00000467847 SIGLEC14Q08ET2 396 aa19.36■□□□□ 0.69
TRIM56-203ENST00000467847 GLB1LQ6UWU2 654 aa19.36■□□□□ 0.69
TRIM56-203ENST00000467847 CATSPER4Q7RTX7 472 aa19.36■□□□□ 0.69
TRIM56-203ENST00000467847 KSR1Q8IVT5 923 aa19.36■□□□□ 0.69
TRIM56-203ENST00000467847 LPPQ93052 612 aa19.36■□□□□ 0.69
TRIM56-203ENST00000467847 JPH2Q9BR39 696 aaPredicted RBP19.36■□□□□ 0.69
TRIM56-203ENST00000467847 SLKQ9H2G2 1235 aaPredicted RBP19.36■□□□□ 0.69
TRIM56-203ENST00000467847 PDRG1Q9NUG6 133 aa19.36■□□□□ 0.69
TRIM56-203ENST00000467847 KCNJ14Q9UNX9 436 aa19.36■□□□□ 0.69
TRIM56-203ENST00000467847 HCFC2Q9Y5Z7 792 aa19.36■□□□□ 0.69
TRIM56-203ENST00000467847 CCDC194A0A1B0GVG4 234 aa19.35■□□□□ 0.69
TRIM56-203ENST00000467847 CLASP2O75122 1294 aaKnown RBP19.35■□□□□ 0.69
TRIM56-203ENST00000467847 CXCL14O95715 111 aa19.35■□□□□ 0.69
TRIM56-203ENST00000467847 PPP2R5CQ13362 524 aa19.35■□□□□ 0.69
TRIM56-203ENST00000467847 PTPN21Q16825 1174 aa19.35■□□□□ 0.69
TRIM56-203ENST00000467847 CES5AQ6NT32 575 aa19.35■□□□□ 0.69
TRIM56-203ENST00000467847 ZBTB33Q86T24 672 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms