RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 PABPC3Q9H361 631 aaKnown RBP15.73■□□□□ 0.11
SEC16A-208ENST00000467838 KDM4CQ9H3R0 1056 aa15.73■□□□□ 0.11
SEC16A-208ENST00000467838 LRRC4CQ9HCJ2 640 aa15.73■□□□□ 0.11
SEC16A-208ENST00000467838 NYAP2Q9P242 653 aa15.73■□□□□ 0.11
SEC16A-208ENST00000467838 F8W031 263 aaPredicted RBP15.72■□□□□ 0.11
SEC16A-208ENST00000467838 DNAJC8O75937 253 aaPredicted RBP15.72■□□□□ 0.11
SEC16A-208ENST00000467838 HLA-DOAP06340 250 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 CYP3A4P08684 503 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 HSPA6P17066 643 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 VCAM1P19320 739 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 GBP1P32455 592 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 MMP13P45452 471 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 KIF22Q14807 665 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 PREPLQ4J6C6 727 aaPredicted RBP15.72■□□□□ 0.11
SEC16A-208ENST00000467838 WLSQ5T9L3 541 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 C11orf63Q6NUN7 778 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 ZDHHC24Q6UX98 284 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 DEFB132Q7Z7B7 95 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 CCDC50Q8IVM0 306 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 FUKQ8N0W3 1084 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 CERS5Q8N5B7 392 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 NEK9Q8TD19 979 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 CHMP6Q96FZ7 201 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 CCDC114Q96M63 670 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 TMEM109Q9BVC6 243 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 BHMT2Q9H2M3 363 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 CCDC134Q9H6E4 229 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 DMAC2Q9NW81 257 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 STK32BQ9NY57 414 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 BCCIPQ9P287 314 aaKnown RBP eCLIP15.72■□□□□ 0.11
SEC16A-208ENST00000467838 RABGAP1Q9Y3P9 1069 aa15.72■□□□□ 0.11
SEC16A-208ENST00000467838 KIAA0391O15091 583 aaKnown RBP15.71■□□□□ 0.11
SEC16A-208ENST00000467838 MSH4O15457 936 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 PPP1R12BO60237 982 aaPredicted RBP15.71■□□□□ 0.11
SEC16A-208ENST00000467838 CCDC172P0C7W6 258 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 SCTRP47872 440 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 GTF2IP78347 998 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 KCNA1Q09470 495 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 MAPK7Q13164 816 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 DRAP1Q14919 205 aaPredicted RBP15.71■□□□□ 0.11
SEC16A-208ENST00000467838 PPP2R5AQ15172 486 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 RINT1Q6NUQ1 792 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 TEX2Q8IWB9 1127 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 ATXN2LQ8WWM7 1075 aaKnown RBP15.71■□□□□ 0.11
SEC16A-208ENST00000467838 SGSM3Q96HU1 749 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 COA1Q9GZY4 146 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 DNAJC18Q9H819 358 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 ERVK-5Q9HDB9 667 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 DNAJC12Q9UKB3 198 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 ATP8A1Q9Y2Q0 1164 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 PCDHB13Q9Y5F0 798 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 SYNGAP1Q96PV0 1343 aa15.71■□□□□ 0.11
SEC16A-208ENST00000467838 ANKRD62A6NC57 917 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 CLIC2O15247 247 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 CAND2O75155 1236 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 MAP2K2P36507 400 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 ZNF131P52739 623 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 IFFO1Q0D2I5 559 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 CYB5D1Q6P9G0 228 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 CROCCP2Q86T23 111 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 JAMLQ86YT9 394 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 ARHGEF26Q96DR7 871 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 CRAMP1Q96RY5 1269 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 FIZ1Q96SL8 496 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 EIF2AK1Q9BQI3 630 aaKnown RBP15.71■□□□□ 0.1
SEC16A-208ENST00000467838 AMNQ9BXJ7 453 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 ADAM7Q9H2U9 754 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 SEL1LQ9UBV2 794 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 CNOT7Q9UIV1 285 aaKnown RBP15.71■□□□□ 0.1
SEC16A-208ENST00000467838 LOXHD1Q8IVV2 1947 aa15.71■□□□□ 0.1
SEC16A-208ENST00000467838 MIF4GDA9UHW6 222 aaKnown RBP15.7■□□□□ 0.1
SEC16A-208ENST00000467838 ASAP2O43150 1006 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 C21orf2O43822 256 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 PHF2O75151 1096 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 PTGIRP43119 386 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 PMS2P54278 862 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 PDE4CQ08493 712 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 KIAA1755Q5JYT7 1200 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 SLFN13Q68D06 897 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 CDC42EP5Q6NZY7 148 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 HHIPL2Q6UWX4 724 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 C1orf186Q6ZWK4 172 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 RHOT2Q8IXI1 618 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 ALG3Q92685 438 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 INTS2Q9H0H0 1204 aaKnown RBP15.7■□□□□ 0.1
SEC16A-208ENST00000467838 BCAS3Q9H6U6 928 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 TUFT1Q9NNX1 390 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 USP40Q9NVE5 1235 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 GRHL1Q9NZI5 618 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 APEX2Q9UBZ4 518 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 PCYOX1Q9UHG3 505 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 RASAL2Q9UJF2 1139 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 NRXN2Q9P2S2 1712 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 PFASO15067 1338 aa15.7■□□□□ 0.1
SEC16A-208ENST00000467838 CCDC169A6NNP5 214 aa15.69■□□□□ 0.1
SEC16A-208ENST00000467838 MPHOSPH10O00566 681 aaKnown RBP15.69■□□□□ 0.1
SEC16A-208ENST00000467838 GSTA1P08263 222 aa15.69■□□□□ 0.1
SEC16A-208ENST00000467838 ALAS1P13196 640 aa15.69■□□□□ 0.1
SEC16A-208ENST00000467838 POLD1P28340 1107 aa15.69■□□□□ 0.1
SEC16A-208ENST00000467838 ITIH4Q14624 930 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms