RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 VAV3Q9UKW4 847 aa11.62□□□□□ -0.55
SSR3-205ENST00000467789 LIMCH1Q9UPQ0 1083 aa11.62□□□□□ -0.55
SSR3-205ENST00000467789 KIAA1671Q9BY89 1806 aa11.62□□□□□ -0.55
SSR3-205ENST00000467789 DDX11L8A8MPP1 907 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 STBD1O95210 358 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 LARGE1O95461 756 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 KCNQ1P51787 676 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 UBE3AQ05086 875 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 LEXMQ3ZCV2 418 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 ANO5Q75V66 913 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 OTUD6AQ7L8S5 288 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 C4orf19Q8IY42 314 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 NLRP7Q8WX94 980 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 SLC7A3Q8WY07 619 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 HAS1Q92839 578 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 TNFRSF25Q93038 417 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 PABPC5Q96DU9 382 aaKnown RBP11.61□□□□□ -0.55
SSR3-205ENST00000467789 ZSCAN31Q96LW9 406 aaPredicted RBP11.61□□□□□ -0.55
SSR3-205ENST00000467789 ATP6V0A4Q9HBG4 840 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 CHST12Q9NRB3 414 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 GJB4Q9NTQ9 266 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 PLAGL2Q9UPG8 496 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 FAM50BQ9Y247 325 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 PCDHB12Q9Y5F1 795 aa11.61□□□□□ -0.55
SSR3-205ENST00000467789 MRPL42Q9Y6G3 142 aaKnown RBP11.61□□□□□ -0.55
SSR3-205ENST00000467789 TCF20Q9UGU0 1960 aaKnown RBP11.61□□□□□ -0.55
SSR3-205ENST00000467789 FSD2A1L4K1 749 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 CARNS1A5YM72 827 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 EML1O00423 815 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 GRM6O15303 877 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 EOMESO95936 686 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 SKIP12755 728 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 SFPQP23246 707 aaKnown RBP eCLIP11.6□□□□□ -0.55
SSR3-205ENST00000467789 RFC5P40937 340 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 NR5A1Q13285 461 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 SAFBQ15424 915 aaKnown RBP eCLIP11.6□□□□□ -0.55
SSR3-205ENST00000467789 TCEAL5Q5H9L2 206 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 DIS3L2Q8IYB7 885 aaKnown RBP11.6□□□□□ -0.55
SSR3-205ENST00000467789 NEK9Q8TD19 979 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 PPP1R16BQ96T49 567 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 TRAIPQ9BWF2 469 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 TMEM117Q9H0C3 514 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 ZSWIM4Q9H7M6 989 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 CYP26B1Q9NR63 512 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 SH2B1Q9NRF2 756 aaPredicted RBP11.6□□□□□ -0.55
SSR3-205ENST00000467789 PCDHA12Q9UN75 941 aa11.6□□□□□ -0.55
SSR3-205ENST00000467789 ATG2AQ2TAZ0 1938 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 A0A0U1RQF3 1178 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 TBKBP1A7MCY6 615 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 BTBD18B2RXH4 712 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 RBAK-RBAKDNI3L0D1 243 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 ASAP2O43150 1006 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 LAG3P18627 525 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 KCNA5P22460 613 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 POLGP54098 1239 aaPredicted RBP11.59□□□□□ -0.55
SSR3-205ENST00000467789 EMP3P54852 163 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 HMGN5P82970 282 aaKnown RBP11.59□□□□□ -0.55
SSR3-205ENST00000467789 SPIRE1Q08AE8 756 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 ORC2Q13416 577 aaPredicted RBP11.59□□□□□ -0.55
SSR3-205ENST00000467789 CALCRLQ16602 461 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 PAN2Q504Q3 1202 aaKnown RBP11.59□□□□□ -0.55
SSR3-205ENST00000467789 EARS2Q5JPH6 523 aaKnown RBP11.59□□□□□ -0.55
SSR3-205ENST00000467789 SMYD5Q6GMV2 418 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 PDE12Q6L8Q7 609 aaKnown RBP11.59□□□□□ -0.55
SSR3-205ENST00000467789 ABI1Q8IZP0 508 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 SPPL3Q8TCT6 385 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 TCP11Q8WWU5 503 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 CEP170P1Q96L14 293 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 LXNQ9BS40 222 aa11.59□□□□□ -0.55
SSR3-205ENST00000467789 DHX33Q9H6R0 707 aaKnown RBP11.59□□□□□ -0.55
SSR3-205ENST00000467789 SUCLA2Q9P2R7 463 aaPredicted RBP11.59□□□□□ -0.55
SSR3-205ENST00000467789 MYO7AQ13402 2215 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 A0A087WZ62 844 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 TULP1O00294 542 aaPredicted RBP11.58□□□□□ -0.56
SSR3-205ENST00000467789 NEMFO60524 1076 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 JAK2O60674 1132 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 LYPLA2O95372 231 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 ITGB1P05556 798 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 YWHABP31946 246 aaKnown RBP11.58□□□□□ -0.56
SSR3-205ENST00000467789 PPM1AP35813 382 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 DRP2Q13474 957 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 PCBP1Q15365 356 aaKnown RBP eCLIP11.58□□□□□ -0.56
SSR3-205ENST00000467789 CTC1Q2NKJ3 1217 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 SPOUT1Q5T280 376 aaKnown RBP11.58□□□□□ -0.56
SSR3-205ENST00000467789 FAM102BQ5T8I3 360 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 NCAPH2Q6IBW4 605 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 ECHDC2Q86YB7 292 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 RHPN2Q8IUC4 686 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 LRRC43Q8N309 656 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 KLHL23Q8NBE8 558 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 PSPC1Q8WXF1 523 aaKnown RBP11.58□□□□□ -0.56
SSR3-205ENST00000467789 FDXACB1Q9BRP7 624 aaPredicted RBP11.58□□□□□ -0.56
SSR3-205ENST00000467789 MRPL9Q9BYD2 267 aaKnown RBP11.58□□□□□ -0.56
SSR3-205ENST00000467789 TTC12Q9H892 705 aaPredicted RBP11.58□□□□□ -0.56
SSR3-205ENST00000467789 ALG13Q9NP73 1137 aaKnown RBP11.58□□□□□ -0.56
SSR3-205ENST00000467789 LZTS1Q9Y250 596 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 COL4A3BPQ9Y5P4 624 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 ARID2Q68CP9 1835 aa11.58□□□□□ -0.56
SSR3-205ENST00000467789 TMEM150BA6NC51 233 aa11.57□□□□□ -0.56
SSR3-205ENST00000467789 FAM205CA6NFA0 338 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms