RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 STXBP4Q6ZWJ1 553 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 EXOC8Q8IYI6 725 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 LRRC71Q8N4P6 559 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 SLAIN1Q8ND83 568 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 KLHDC9Q8NEP7 349 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 HVCN1Q96D96 273 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 TSG101Q99816 390 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 TRIM5Q9C035 493 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 XPO4Q9C0E2 1151 aaKnown RBP14.31□□□□□ -0.12
COL4A1-202ENST00000467182 KMT5AQ9NQR1 393 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 IFNKQ9P0W0 207 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 PTCH2Q9Y6C5 1203 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 SCN10AQ9Y5Y9 1956 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 EVPLQ92817 2033 aa14.31□□□□□ -0.12
COL4A1-202ENST00000467182 A0A1B0GTH6 734 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 CCDC169A6NNP5 214 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 CALUO43852 315 aaPredicted RBP14.3□□□□□ -0.12
COL4A1-202ENST00000467182 PGK1P00558 417 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 INHAP05111 366 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 C6orf222P0C671 652 aaPredicted RBP14.3□□□□□ -0.12
COL4A1-202ENST00000467182 RARBP10826 455 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 EEF1GP26641 437 aaKnown RBP14.3□□□□□ -0.12
COL4A1-202ENST00000467182 KLRC1P26715 233 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 CNGA1P29973 690 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 HOXC8P31273 242 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 IGBP1P78318 339 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 ADAM17P78536 824 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 FKBP3Q00688 224 aaKnown RBP14.3□□□□□ -0.12
COL4A1-202ENST00000467182 SPAG1Q07617 926 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 PPFIA1Q13136 1202 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 KRT31Q15323 416 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 KIAA0753Q2KHM9 967 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 EFCAB12Q6NXP0 572 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 MTHFD1LQ6UB35 978 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 MAP4K3Q8IVH8 894 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 TMEM174Q8WUU8 243 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 TCP11Q8WWU5 503 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 PRPF31Q8WWY3 499 aaKnown RBP14.3□□□□□ -0.12
COL4A1-202ENST00000467182 EEF2KMTQ96G04 330 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 IFT74Q96LB3 600 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 CNOT6LQ96LI5 555 aaKnown RBP14.3□□□□□ -0.12
COL4A1-202ENST00000467182 CEP63Q96MT8 703 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 ACCSQ96QU6 501 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 JPH2Q9BR39 696 aaPredicted RBP14.3□□□□□ -0.12
COL4A1-202ENST00000467182 AGPAT3Q9NRZ7 376 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 DMAC2Q9NW81 257 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 TBX20Q9UMR3 447 aa14.3□□□□□ -0.12
COL4A1-202ENST00000467182 DENND3A2RUS2 1198 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 MAGEB2O15479 319 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 KPNA6O60684 536 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 SMIM10L2AP0DMW4 78 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 SMIM10L2BP0DMW5 78 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 CDK11BP21127 795 aaKnown RBP14.29□□□□□ -0.12
COL4A1-202ENST00000467182 CST5P28325 142 aaPredicted RBP14.29□□□□□ -0.12
COL4A1-202ENST00000467182 CLCN3P51790 818 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 COPB1P53618 953 aaKnown RBP14.29□□□□□ -0.12
COL4A1-202ENST00000467182 SMTNP53814 917 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 MARSP56192 900 aaKnown RBP14.29□□□□□ -0.12
COL4A1-202ENST00000467182 UBASH3AP57075 661 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 LAMTOR4Q0VGL1 99 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 NR1I3Q14994 352 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 PPP2R5AQ15172 486 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 BRDTQ58F21 947 aaPredicted RBP14.29□□□□□ -0.12
COL4A1-202ENST00000467182 CDCA2Q69YH5 1023 aaPredicted RBP14.29□□□□□ -0.12
COL4A1-202ENST00000467182 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.29□□□□□ -0.12
COL4A1-202ENST00000467182 FILIP1Q7Z7B0 1213 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 PPP1R13LQ8WUF5 828 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 LMBR1Q8WVP7 490 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 GBP3Q9H0R5 595 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 TMEM206Q9H813 350 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 SUGCTQ9HAC7 445 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 XPNPEP3Q9NQH7 507 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 SETD4Q9NVD3 440 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 SUCLA2Q9P2R7 463 aaPredicted RBP14.29□□□□□ -0.12
COL4A1-202ENST00000467182 DDX20Q9UHI6 824 aaKnown RBP14.29□□□□□ -0.12
COL4A1-202ENST00000467182 KCNG1Q9UIX4 513 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 TRIM17Q9Y577 477 aa14.29□□□□□ -0.12
COL4A1-202ENST00000467182 MBLAC1A4D2B0 266 aaPredicted RBP14.28□□□□□ -0.12
COL4A1-202ENST00000467182 RRN3P2A6NIE6 340 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 TISP43B9A030 160 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 CLIC2O15247 247 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 SERPINC1P01008 464 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 NR3C1P04150 777 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 EDN1P05305 212 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 GJB1P08034 283 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 NR2F2P24468 414 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 GRK4P32298 578 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 ADAM9Q13443 819 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 GNASQ5JWF2 1037 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 MIIPQ5JXC2 388 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 LHX8Q68G74 356 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 SLC39A4Q6P5W5 647 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 SLC9A9Q8IVB4 645 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 C12orf56Q8IXR9 622 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 PSPC1Q8WXF1 523 aaKnown RBP14.28□□□□□ -0.12
COL4A1-202ENST00000467182 ANP32BQ92688 251 aaKnown RBP14.28□□□□□ -0.12
COL4A1-202ENST00000467182 NRCAMQ92823 1304 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 MTG1Q9BT17 334 aaPredicted RBP14.28□□□□□ -0.12
COL4A1-202ENST00000467182 BEGAINQ9BUH8 593 aa14.28□□□□□ -0.12
COL4A1-202ENST00000467182 KATNAL1Q9BW62 490 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms