RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 NKRFO15226 690 aaKnown RBP eCLIP10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 STRNO43815 780 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 USO1O60763 962 aaKnown RBP10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 AKAP3O75969 853 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 CYP2C8P10632 490 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 TNNT1P13805 278 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 TRIM21P19474 475 aaKnown RBP10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 NCKAP1LP55160 1127 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 NPEPPSP55786 919 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 MCCD1P59942 119 aaPredicted RBP10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 PTPN14Q15678 1187 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 DNTTIP2Q5QJE6 756 aaKnown RBP10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 CYP26C1Q6V0L0 522 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 SEPT14Q6ZU15 432 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 CYFIP1Q7L576 1253 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 ZNF397Q8NF99 534 aaPredicted RBP10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 AFAP1L1Q8TED9 768 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 CPLX3Q8WVH0 158 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 CEP170P1Q96L14 293 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 ACCSQ96QU6 501 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 PARK7Q99497 189 aaKnown RBP10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 NIFKQ9BYG3 293 aaKnown RBP10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 ZNF302Q9NR11 478 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 CYP26B1Q9NR63 512 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 AGPAT3Q9NRZ7 376 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 DDX41Q9UJV9 622 aaKnown RBP10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 PPP2R2CQ9Y2T4 447 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 UTRNP46939 3433 aa10.47□□□□□ -0.73
APOBEC1-202ENST00000467171 PTPRFP10586 1907 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 GSTTP1A0A1W2PQM5 241 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 GTPBP10A4D1E9 387 aaKnown RBP10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 H0YCG3 227 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 K7ENM7 598 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 MAPK13O15264 365 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 LGR5O75473 907 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 EPB41P11171 864 aaKnown RBP10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 PSMC2P35998 433 aaKnown RBP10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 SMTNP53814 917 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 PRKCEQ02156 737 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 KCNA1Q09470 495 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 KCNMA1Q12791 1236 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 PPP2R5AQ15172 486 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 ZNF792Q3KQV3 632 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 ZC2HC1CQ53FD0 456 aaPredicted RBP10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 UTP14CQ5TAP6 766 aaKnown RBP10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 FAM160B1Q5W0V3 765 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 CCDC62Q6P9F0 684 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 REXO1L1PQ8IX06 675 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 SMCR8Q8TEV9 937 aaPredicted RBP10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 SEPT1Q8WYJ6 367 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 IRX2Q9BZI1 471 aaPredicted RBP10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 NUCKS1Q9H1E3 243 aaKnown RBP10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 R3HDMLQ9H3Y0 253 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 ATP6V0A4Q9HBG4 840 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 POLD4Q9HCU8 107 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 ZCCHC17Q9NP64 241 aaKnown RBP10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 TRMT1Q9NXH9 659 aaKnown RBP10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 PAXBP1Q9Y5B6 917 aa10.46□□□□□ -0.73
APOBEC1-202ENST00000467171 TMEM150BA6NC51 233 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 SMAPO00193 183 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 AFPP02771 609 aaKnown RBP10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 OATP04181 439 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 PGK2P07205 417 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 CCDC175P0C221 793 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 XRCC5P13010 732 aaKnown RBP10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 ATP4AP20648 1035 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 RFC5P40937 340 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 DMP1Q13316 513 aaPredicted RBP10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 TARBP2Q15633 366 aaKnown RBP10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 FAM110CQ1W6H9 321 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 CELF3Q5SZQ8 465 aaKnown RBP10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 FAM102BQ5T8I3 360 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 PLA2G4FQ68DD2 849 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 RAD9BQ6WBX8 426 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 ZNF662Q6ZS27 426 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 HAUS6Q7Z4H7 955 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 MAP4K3Q8IVH8 894 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 CCDC170Q8IYT3 715 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 SYCP3Q8IZU3 236 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 SYN2Q92777 582 aaPredicted RBP10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 FAM167AQ96KS9 214 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 C16orf45Q96MC5 204 aaPredicted RBP10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 PCMTD1Q96MG8 357 aaPredicted RBP10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 PCYT2Q99447 389 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 PORCNQ9H237 461 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 DHX33Q9H6R0 707 aaKnown RBP10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 EFCC1Q9HA90 598 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 PLCB1Q9NQ66 1216 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 XPNPEP1Q9NQW7 623 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 NRBP2Q9NSY0 501 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 ZNHIT6Q9NWK9 470 aaKnown RBP10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 PLAGL2Q9UPG8 496 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 EXOC7Q9UPT5 735 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 DIS3Q9Y2L1 958 aaKnown RBP10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 DAAM1Q9Y4D1 1078 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 ADGRG1Q9Y653 693 aa10.45□□□□□ -0.74
APOBEC1-202ENST00000467171 RBM47A0AV96 593 aaKnown RBP10.44□□□□□ -0.74
APOBEC1-202ENST00000467171 SOWAHDA6NJG2 315 aa10.44□□□□□ -0.74
APOBEC1-202ENST00000467171 CLIC2O15247 247 aa10.44□□□□□ -0.74
APOBEC1-202ENST00000467171 GGPS1O95749 300 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms