RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 NPEPPSP55786 919 aa6.16□□□□□ -1.42
XRN1-206ENST00000467077 LACTBP83111 547 aaPredicted RBP6.16□□□□□ -1.42
XRN1-206ENST00000467077 ALDH6A1Q02252 535 aaKnown RBP6.16□□□□□ -1.42
XRN1-206ENST00000467077 TMEM132BQ14DG7 1078 aa6.16□□□□□ -1.42
XRN1-206ENST00000467077 SP5Q6BEB4 398 aaPredicted RBP6.16□□□□□ -1.42
XRN1-206ENST00000467077 CELF2-AS1Q8N7Q2 184 aa6.16□□□□□ -1.42
XRN1-206ENST00000467077 PLA2G15Q8NCC3 412 aa6.16□□□□□ -1.42
XRN1-206ENST00000467077 HNRNPLLQ8WVV9 542 aaKnown RBP6.16□□□□□ -1.42
XRN1-206ENST00000467077 CAVIN3Q969G5 261 aa6.16□□□□□ -1.42
XRN1-206ENST00000467077 SPATA5L1Q9BVQ7 753 aa6.16□□□□□ -1.42
XRN1-206ENST00000467077 CENPVL1A0A0U1RR11 272 aa6.15□□□□□ -1.42
XRN1-206ENST00000467077 GOLGA6L22H0YM25 854 aa6.15□□□□□ -1.42
XRN1-206ENST00000467077 SDHAP31040 664 aa6.15□□□□□ -1.42
XRN1-206ENST00000467077 SPIDRQ14159 915 aa6.15□□□□□ -1.42
XRN1-206ENST00000467077 APBB1IPQ7Z5R6 666 aaPredicted RBP6.15□□□□□ -1.42
XRN1-206ENST00000467077 MYEOVQ96EZ4 313 aa6.15□□□□□ -1.42
XRN1-206ENST00000467077 IPO9Q96P70 1041 aaKnown RBP6.15□□□□□ -1.42
XRN1-206ENST00000467077 FOXB1Q99853 325 aa6.15□□□□□ -1.42
XRN1-206ENST00000467077 SERHL2Q9H4I8 314 aa6.15□□□□□ -1.42
XRN1-206ENST00000467077 RASSF10A6NK89 507 aa6.14□□□□□ -1.43
XRN1-206ENST00000467077 ELLP55199 621 aaPredicted RBP6.14□□□□□ -1.43
XRN1-206ENST00000467077 SUMO1P63165 101 aaKnown RBP6.14□□□□□ -1.43
XRN1-206ENST00000467077 GNL2Q13823 731 aaKnown RBP6.14□□□□□ -1.43
XRN1-206ENST00000467077 TM4SF20Q53R12 229 aa6.14□□□□□ -1.43
XRN1-206ENST00000467077 CXorf67Q86X51 503 aaPredicted RBP6.14□□□□□ -1.43
XRN1-206ENST00000467077 HOMEZQ8IX15 550 aa6.14□□□□□ -1.43
XRN1-206ENST00000467077 E2F7Q96AV8 911 aa6.14□□□□□ -1.43
XRN1-206ENST00000467077 CDC6Q99741 560 aa6.14□□□□□ -1.43
XRN1-206ENST00000467077 SLC46A2Q9BY10 475 aa6.14□□□□□ -1.43
XRN1-206ENST00000467077 PRDM13Q9H4Q3 707 aa6.14□□□□□ -1.43
XRN1-206ENST00000467077 MYADML2A6NDP7 307 aa6.13□□□□□ -1.43
XRN1-206ENST00000467077 DAPK3O43293 454 aa6.13□□□□□ -1.43
XRN1-206ENST00000467077 LPXNO60711 386 aa6.13□□□□□ -1.43
XRN1-206ENST00000467077 IQSEC1Q6DN90 963 aa6.13□□□□□ -1.43
XRN1-206ENST00000467077 CLEC14AQ86T13 490 aa6.13□□□□□ -1.43
XRN1-206ENST00000467077 CMTR2Q8IYT2 770 aaKnown RBP6.13□□□□□ -1.43
XRN1-206ENST00000467077 CMTM4Q8IZR5 234 aa6.13□□□□□ -1.43
XRN1-206ENST00000467077 BOLLQ8N9W6 283 aaKnown RBP6.13□□□□□ -1.43
XRN1-206ENST00000467077 WDR92Q96MX6 357 aa6.13□□□□□ -1.43
XRN1-206ENST00000467077 WDR11Q9BZH6 1224 aa6.13□□□□□ -1.43
XRN1-206ENST00000467077 C14orf93Q9H972 538 aaKnown RBP6.13□□□□□ -1.43
XRN1-206ENST00000467077 POLR3BQ9NW08 1133 aaPredicted RBP6.13□□□□□ -1.43
XRN1-206ENST00000467077 ANKFY1Q9P2R3 1169 aa6.13□□□□□ -1.43
XRN1-206ENST00000467077 TESQ9UGI8 421 aaKnown RBP6.13□□□□□ -1.43
XRN1-206ENST00000467077 ROM1Q03395 351 aa6.12□□□□□ -1.43
XRN1-206ENST00000467077 PRR16Q569H4 304 aa6.12□□□□□ -1.43
XRN1-206ENST00000467077 SMG7Q92540 1137 aaKnown RBP6.12□□□□□ -1.43
XRN1-206ENST00000467077 NKD2Q969F2 451 aaPredicted RBP6.12□□□□□ -1.43
XRN1-206ENST00000467077 KCNH6Q9H252 994 aa6.12□□□□□ -1.43
XRN1-206ENST00000467077 EPC1Q9H2F5 836 aa6.12□□□□□ -1.43
XRN1-206ENST00000467077 ZNF768Q9H5H4 540 aaKnown RBP6.12□□□□□ -1.43
XRN1-206ENST00000467077 B3GALT1Q9Y5Z6 326 aa6.12□□□□□ -1.43
XRN1-206ENST00000467077 POLR2AP24928 1970 aaKnown RBP6.11□□□□□ -1.43
XRN1-206ENST00000467077 ZBTB7CA1YPR0 619 aa6.11□□□□□ -1.43
XRN1-206ENST00000467077 TYRP1P17643 537 aa6.11□□□□□ -1.43
XRN1-206ENST00000467077 CXCR5P32302 372 aa6.11□□□□□ -1.43
XRN1-206ENST00000467077 CATSPEREQ5SY80 951 aa6.11□□□□□ -1.43
XRN1-206ENST00000467077 TMCO4Q5TGY1 634 aa6.11□□□□□ -1.43
XRN1-206ENST00000467077 CCDC62Q6P9F0 684 aa6.11□□□□□ -1.43
XRN1-206ENST00000467077 LRP10Q7Z4F1 713 aa6.11□□□□□ -1.43
XRN1-206ENST00000467077 SLC7A14Q8TBB6 771 aa6.11□□□□□ -1.43
XRN1-206ENST00000467077 DYDC2Q96IM9 177 aa6.11□□□□□ -1.43
XRN1-206ENST00000467077 FRMD4BQ9Y2L6 1034 aa6.11□□□□□ -1.43
XRN1-206ENST00000467077 PCDHA9Q9Y5H5 950 aa6.11□□□□□ -1.43
XRN1-206ENST00000467077 SLC12A8A0AV02 714 aa6.1□□□□□ -1.43
XRN1-206ENST00000467077 IKBKBO14920 756 aa6.1□□□□□ -1.43
XRN1-206ENST00000467077 ZFP36P26651 326 aaKnown RBP6.1□□□□□ -1.43
XRN1-206ENST00000467077 GABREP78334 506 aa6.1□□□□□ -1.43
XRN1-206ENST00000467077 FSTL4Q6MZW2 842 aa6.1□□□□□ -1.43
XRN1-206ENST00000467077 COQ10AQ96MF6 247 aa6.1□□□□□ -1.43
XRN1-206ENST00000467077 CPPED1Q9BRF8 314 aaPredicted RBP6.1□□□□□ -1.43
XRN1-206ENST00000467077 KCMF1Q9P0J7 381 aa6.1□□□□□ -1.43
XRN1-206ENST00000467077 RNF7Q9UBF6 113 aa6.1□□□□□ -1.43
XRN1-206ENST00000467077 TRBV23-1A0A0A0MS06 115 aa6.09□□□□□ -1.43
XRN1-206ENST00000467077 HKR1P10072 659 aa6.09□□□□□ -1.43
XRN1-206ENST00000467077 ANTXR2P58335 489 aa6.09□□□□□ -1.43
XRN1-206ENST00000467077 SLC6A3Q01959 620 aa6.09□□□□□ -1.43
XRN1-206ENST00000467077 RTN4RL1Q86UN2 441 aaPredicted RBP6.09□□□□□ -1.43
XRN1-206ENST00000467077 ARHGEF19Q8IW93 802 aa6.09□□□□□ -1.43
XRN1-206ENST00000467077 DLG3Q92796 817 aa6.09□□□□□ -1.43
XRN1-206ENST00000467077 TRPM5Q9NZQ8 1165 aa6.09□□□□□ -1.43
XRN1-206ENST00000467077 RNASET2O00584 256 aaKnown RBP6.08□□□□□ -1.44
XRN1-206ENST00000467077 STC2O76061 302 aa6.08□□□□□ -1.44
XRN1-206ENST00000467077 CRTAMO95727 393 aa6.08□□□□□ -1.44
XRN1-206ENST00000467077 PRLP01236 227 aa6.08□□□□□ -1.44
XRN1-206ENST00000467077 FGRP09769 529 aa6.08□□□□□ -1.44
XRN1-206ENST00000467077 RGS3P49796 1198 aa6.08□□□□□ -1.44
XRN1-206ENST00000467077 ANKS3Q6ZW76 656 aa6.08□□□□□ -1.44
XRN1-206ENST00000467077 GLB1L3Q8NCI6 653 aaPredicted RBP6.08□□□□□ -1.44
XRN1-206ENST00000467077 MRRFQ96E11 262 aaKnown RBP6.08□□□□□ -1.44
XRN1-206ENST00000467077 SPATA9Q9BWV2 254 aa6.08□□□□□ -1.44
XRN1-206ENST00000467077 DNAI1Q9UI46 699 aa6.08□□□□□ -1.44
XRN1-206ENST00000467077 TMEM200CA6NKL6 621 aa6.07□□□□□ -1.44
XRN1-206ENST00000467077 NRP1O14786 923 aa6.07□□□□□ -1.44
XRN1-206ENST00000467077 MTSS1O43312 755 aa6.07□□□□□ -1.44
XRN1-206ENST00000467077 RASGRP1O95267 797 aa6.07□□□□□ -1.44
XRN1-206ENST00000467077 C6orf222P0C671 652 aaPredicted RBP6.07□□□□□ -1.44
XRN1-206ENST00000467077 KIR2DL3P43628 341 aa6.07□□□□□ -1.44
XRN1-206ENST00000467077 SEC24CP53992 1094 aa6.07□□□□□ -1.44
XRN1-206ENST00000467077 IRF9Q00978 393 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms