RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 EFEMP2O95967 443 aa6.46□□□□□ -1.37
CXXC4-202ENST00000466963 CHRM1P11229 460 aaPredicted RBP6.46□□□□□ -1.37
CXXC4-202ENST00000466963 SREBF1P36956 1147 aa6.46□□□□□ -1.37
CXXC4-202ENST00000466963 RBM25P49756 843 aaKnown RBP6.46□□□□□ -1.37
CXXC4-202ENST00000466963 HTR4Q13639 388 aa6.46□□□□□ -1.37
CXXC4-202ENST00000466963 NOMO2Q5JPE7 1267 aa6.46□□□□□ -1.37
CXXC4-202ENST00000466963 ZBTB41Q5SVQ8 909 aa6.46□□□□□ -1.37
CXXC4-202ENST00000466963 ABHD15Q6UXT9 468 aa6.46□□□□□ -1.37
CXXC4-202ENST00000466963 AGMOQ6ZNB7 445 aa6.46□□□□□ -1.37
CXXC4-202ENST00000466963 SPRED2Q7Z698 418 aa6.46□□□□□ -1.37
CXXC4-202ENST00000466963 KIAA0319LQ8IZA0 1049 aa6.46□□□□□ -1.37
CXXC4-202ENST00000466963 TCP11Q8WWU5 503 aa6.46□□□□□ -1.37
CXXC4-202ENST00000466963 PURBQ96QR8 312 aaKnown RBP6.46□□□□□ -1.37
CXXC4-202ENST00000466963 PRKD2Q9BZL6 878 aa6.46□□□□□ -1.37
CXXC4-202ENST00000466963 ZNF302Q9NR11 478 aa6.46□□□□□ -1.37
CXXC4-202ENST00000466963 MYO9BQ13459 2157 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 MEIS1O00470 390 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 DARSP14868 501 aaKnown RBP6.46□□□□□ -1.38
CXXC4-202ENST00000466963 BCAR1P56945 870 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 ACTR2P61160 394 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 DSG1Q02413 1049 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 PTPN14Q15678 1187 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 CEP55Q53EZ4 464 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 RARS2Q5T160 578 aaKnown RBP6.46□□□□□ -1.38
CXXC4-202ENST00000466963 ZNF852Q6ZMS4 543 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 WDR5BQ86VZ2 330 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 IFNLR1Q8IU57 520 aaPredicted RBP6.46□□□□□ -1.38
CXXC4-202ENST00000466963 SIX5Q8N196 739 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 SLC44A3Q8N4M1 653 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 NCOA7Q8NI08 942 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 RPS6KC1Q96S38 1066 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 MYADMQ96S97 322 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 NIFKQ9BYG3 293 aaKnown RBP6.46□□□□□ -1.38
CXXC4-202ENST00000466963 CHRDQ9H2X0 955 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 PSTPIP2Q9H939 334 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 RIC8AQ9NPQ8 531 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 RNF19AQ9NV58 838 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 CDH7Q9ULB5 785 aa6.46□□□□□ -1.38
CXXC4-202ENST00000466963 TK2O00142 265 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 GPR32O75388 356 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 C22orf31O95567 290 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 ALDH2P05091 517 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 CIITAP33076 1130 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 RFC5P40937 340 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 WTAPQ15007 396 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 RRP12Q5JTH9 1297 aaKnown RBP6.45□□□□□ -1.38
CXXC4-202ENST00000466963 RABEPKQ7Z6M1 372 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 RALYLQ86SE5 291 aaKnown RBP6.45□□□□□ -1.38
CXXC4-202ENST00000466963 NFKBIZQ9BYH8 718 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 TRPV4Q9HBA0 871 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 LIMD1Q9UGP4 676 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 TPCN1Q9ULQ1 816 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 NCLP19338 710 aaKnown RBP6.45□□□□□ -1.38
CXXC4-202ENST00000466963 CSRP1P21291 193 aaKnown RBP6.45□□□□□ -1.38
CXXC4-202ENST00000466963 SCP2P22307 547 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 KLRC1P26715 233 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 GLUD2P49448 558 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 CHMP4BP1P59074 171 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 GALNT17Q6IS24 598 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 FAM228AQ86W67 206 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 VPS52Q8N1B4 723 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 FLCNQ8NFG4 579 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 ELSPBP1Q96BH3 223 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 UROC1Q96N76 676 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 FAM193BQ96PV7 902 aaPredicted RBP6.45□□□□□ -1.38
CXXC4-202ENST00000466963 AGO4Q9HCK5 861 aaKnown RBP6.45□□□□□ -1.38
CXXC4-202ENST00000466963 DIAPH3Q9NSV4 1193 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 GIT1Q9Y2X7 761 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 NOC2LQ9Y3T9 749 aaKnown RBP6.45□□□□□ -1.38
CXXC4-202ENST00000466963 CCDC196A0A1B0GTZ2 297 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.45□□□□□ -1.38
CXXC4-202ENST00000466963 MEIS2O14770 477 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 NMT2O60551 498 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 ATG13O75143 517 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 ZMYND10O75800 440 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 LAMP2P13473 410 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 PDE1AP54750 535 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 SNAP25P60880 206 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 PLD1Q13393 1074 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 TMCO2Q7Z6W1 182 aaPredicted RBP6.45□□□□□ -1.38
CXXC4-202ENST00000466963 LONP2Q86WA8 852 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 UBA5Q9GZZ9 404 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 ADAMTS10Q9H324 1103 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 LTB4R2Q9NPC1 389 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 PCDHA10Q9Y5I2 948 aa6.45□□□□□ -1.38
CXXC4-202ENST00000466963 WDR64B1ANS9 1081 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 TMEM189-UBE2V1I3L0A0 370 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 KLRC2P26717 231 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 PHKA2P46019 1235 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 AMPD2Q01433 879 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 TROAPQ12815 778 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 IL31Q6EBC2 164 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.44□□□□□ -1.38
CXXC4-202ENST00000466963 CNTNAP3BQ96NU0 1288 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 HINFPQ9BQA5 517 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 CNTNAP3Q9BZ76 1288 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 ZSWIM5Q9P217 1185 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 HSFX1Q9UBD0 423 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 NID2Q14112 1375 aa6.44□□□□□ -1.38
CXXC4-202ENST00000466963 FAM221BA6H8Z2 402 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms