RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 DYMQ7RTS9 669 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 RHPN2Q8IUC4 686 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 CCDC65Q8IXS2 484 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 GRAMD1CQ8IYS0 662 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 SPATA20Q8TB22 786 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 ASAP3Q8TDY4 903 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 STAMQ92783 540 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 CELF4Q9BZC1 486 aaKnown RBP16.8■□□□□ 0.28
NPHP4-205ENST00000466897 ADAMTS10Q9H324 1103 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 CLSTN2Q9H4D0 955 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 OLFML3Q9NRN5 406 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 TMEM39AQ9NV64 488 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 TRPV2Q9Y5S1 764 aa16.8■□□□□ 0.28
NPHP4-205ENST00000466897 RSPH10B2B2RC85 870 aa16.79■□□□□ 0.28
NPHP4-205ENST00000466897 H0YCG3 227 aa16.79■□□□□ 0.28
NPHP4-205ENST00000466897 RSPH10BP0C881 870 aa16.79■□□□□ 0.28
NPHP4-205ENST00000466897 ABCD1P33897 745 aa16.79■□□□□ 0.28
NPHP4-205ENST00000466897 NLRP11P59045 1033 aaKnown RBP16.79■□□□□ 0.28
NPHP4-205ENST00000466897 RAD51AP2Q09MP3 1159 aa16.79■□□□□ 0.28
NPHP4-205ENST00000466897 PCBP1Q15365 356 aaKnown RBP eCLIP16.79■□□□□ 0.28
NPHP4-205ENST00000466897 ZNF618Q5T7W0 954 aa16.79■□□□□ 0.28
NPHP4-205ENST00000466897 LRRC8DQ7L1W4 858 aa16.79■□□□□ 0.28
NPHP4-205ENST00000466897 USP38Q8NB14 1042 aa16.79■□□□□ 0.28
NPHP4-205ENST00000466897 BSNDQ8WZ55 320 aa16.79■□□□□ 0.28
NPHP4-205ENST00000466897 C2orf40Q9H1Z8 148 aa16.79■□□□□ 0.28
NPHP4-205ENST00000466897 ST6GALNAC4Q9H4F1 302 aa16.79■□□□□ 0.28
NPHP4-205ENST00000466897 CDY2AQ9Y6F7 541 aa16.79■□□□□ 0.28
NPHP4-205ENST00000466897 KLRC4O43908 158 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 EVI5O60447 810 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 TIMP1P01033 207 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 CHRNA1P02708 482 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 PHKA2P46019 1235 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 NPTX2P47972 431 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 SMTNP53814 917 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 NCKAP1LP55160 1127 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 PTENP60484 403 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 COASYQ13057 564 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 KCNB1Q14721 858 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 KLHL40Q2TBA0 621 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 ODR4Q5SWX8 454 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 NT5DC1Q5TFE4 455 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 SRGAP1Q7Z6B7 1085 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 RNF149Q8NC42 400 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 GSDMAQ96QA5 445 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 INO80BQ9C086 356 aaPredicted RBP16.78■□□□□ 0.28
NPHP4-205ENST00000466897 BLZF1Q9H2G9 400 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 IFT122Q9HBG6 1241 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 PANK4Q9NVE7 773 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 ARHGAP28Q9P2N2 729 aa16.78■□□□□ 0.28
NPHP4-205ENST00000466897 TRIM43BA6NCK2 446 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 TRAK2O60296 914 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 SMC2O95347 1197 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 RPN1P04843 607 aaKnown RBP16.77■□□□□ 0.28
NPHP4-205ENST00000466897 IQCF3P0C7M6 154 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 IDEP14735 1019 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 EIF4BP23588 611 aaKnown RBP16.77■□□□□ 0.28
NPHP4-205ENST00000466897 RFC2P35250 354 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 SARSP49591 514 aaKnown RBP16.77■□□□□ 0.28
NPHP4-205ENST00000466897 EFNA5P52803 228 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 PEX3P56589 373 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 CACNB1Q02641 598 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-205ENST00000466897 PNOCQ13519 176 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 KIZQ2M2Z5 673 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 SKOR2Q2VWA4 1001 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-205ENST00000466897 KSR1Q8IVT5 923 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 MYCT1Q8N699 235 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 NLRP7Q8WX94 980 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 CCDC47Q96A33 483 aaKnown RBP16.77■□□□□ 0.28
NPHP4-205ENST00000466897 TRIM43Q96BQ3 446 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-205ENST00000466897 NLRP4Q96MN2 994 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 FIZ1Q96SL8 496 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 GCOM2Q9BZD3 368 aaPredicted RBP16.77■□□□□ 0.28
NPHP4-205ENST00000466897 GTPBP4Q9BZE4 634 aaKnown RBP16.77■□□□□ 0.28
NPHP4-205ENST00000466897 NUP62CLQ9H1M0 184 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 RMND1Q9NWS8 449 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 PRKAG2Q9UGJ0 569 aa16.77■□□□□ 0.28
NPHP4-205ENST00000466897 A0A087WZ62 844 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 LRRIQ4A6NIV6 560 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 SFI1A8K8P3 1242 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 RHOBTB3O94955 611 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 SRGAP2CP0DJJ0 459 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 DARSP14868 501 aaKnown RBP16.76■□□□□ 0.27
NPHP4-205ENST00000466897 CASP1P29466 404 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 TMEM62Q0P6H9 643 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 PSMD2Q13200 908 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 ALCAMQ13740 583 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 NFKBIBQ15653 356 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 HERC4Q5GLZ8 1057 aaPredicted RBP16.76■□□□□ 0.27
NPHP4-205ENST00000466897 FBXO47Q5MNV8 452 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 SFR1Q86XK3 245 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 ZBTB8OSQ8IWT0 167 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 FAM178BQ8IXR5 827 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 C7orf61Q8IZ16 206 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 TMEM161BQ8NDZ6 487 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 DEPTORQ8TB45 409 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 HVCN1Q96D96 273 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 OSMRQ99650 979 aa16.76■□□□□ 0.27
NPHP4-205ENST00000466897 FDXACB1Q9BRP7 624 aaPredicted RBP16.76■□□□□ 0.27
NPHP4-205ENST00000466897 WNT8AQ9H1J5 351 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms