RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 TCTN1Q2MV58 587 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 ARSHQ5FYA8 562 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 ODR4Q5SWX8 454 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 C9orf50Q5SZB4 431 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 SV2BQ7L1I2 683 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 OTOP2Q7RTS6 562 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 IQUBQ8NA54 791 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 RNF149Q8NC42 400 aa16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 PYM1Q9BRP8 204 aaKnown RBP16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 INO80BQ9C086 356 aaPredicted RBP16.02■□□□□ 0.16
DNMT3A-208ENST00000466601 SIP14410 1827 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 NPHP3-ACAD11A0A0J9YXS1 232 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 GOLGA6L4A6NEF3 574 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 GPR182O15218 404 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 PFKFB1P16118 471 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 POU5F1BQ06416 359 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 RAD51AP2Q09MP3 1159 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 NFX1Q12986 1120 aaKnown RBP16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 MAPK7Q13164 816 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 PAK2Q13177 524 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 IKBKEQ14164 716 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 SRGAP1Q7Z6B7 1085 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 FAM228AQ86W67 206 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 DAW1Q8N136 415 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 HERVK_113Q902F9 699 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 APBB2Q92870 758 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 IFT74Q96LB3 600 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 DRC1Q96MC2 740 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 CUEDC2Q9H467 287 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 IFT122Q9HBG6 1241 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 ERVK-5Q9HDB9 667 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 PADI3Q9ULW8 664 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 COLQQ9Y215 455 aaPredicted RBP16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 HPSEQ9Y251 543 aa16.01■□□□□ 0.15
DNMT3A-208ENST00000466601 TET1Q8NFU7 2136 aa16■□□□□ 0.15
DNMT3A-208ENST00000466601 FAM237AA0A1B0GTK4 181 aa16■□□□□ 0.15
DNMT3A-208ENST00000466601 ABHD14A-ACY1A0A1B0GW23 586 aa16■□□□□ 0.15
DNMT3A-208ENST00000466601 CSDE1O75534 798 aaKnown RBP16■□□□□ 0.15
DNMT3A-208ENST00000466601 KRT18P05783 430 aaKnown RBP16■□□□□ 0.15
DNMT3A-208ENST00000466601 NAMPTP43490 491 aa16■□□□□ 0.15
DNMT3A-208ENST00000466601 PHKA2P46019 1235 aa16■□□□□ 0.15
DNMT3A-208ENST00000466601 PTENP60484 403 aa16■□□□□ 0.15
DNMT3A-208ENST00000466601 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
DNMT3A-208ENST00000466601 PPP2R5AQ15172 486 aa16■□□□□ 0.15
DNMT3A-208ENST00000466601 TDHQ8IZJ6 230 aa16■□□□□ 0.15
DNMT3A-208ENST00000466601 FSIP1Q8NA03 581 aa16■□□□□ 0.15
DNMT3A-208ENST00000466601 BSNDQ8WZ55 320 aa16■□□□□ 0.15
DNMT3A-208ENST00000466601 MRPS27Q92552 414 aaKnown RBP16■□□□□ 0.15
DNMT3A-208ENST00000466601 MTIF3Q9H2K0 278 aaKnown RBP16■□□□□ 0.15
DNMT3A-208ENST00000466601 ST3GAL5Q9UNP4 418 aa16■□□□□ 0.15
DNMT3A-208ENST00000466601 MYMKA6NI61 221 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 LRRIQ4A6NIV6 560 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 SFI1A8K8P3 1242 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 ZBBXA8MT70 800 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 BAIAP3O94812 1187 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 SLC34A2O95436 690 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 FGFR4P22455 802 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 SYKP43405 635 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 NDUFA8P51970 172 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 GIT2Q14161 759 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 DYMQ7RTS9 669 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 IFNLR1Q8IU57 520 aaPredicted RBP15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 RNPC3Q96LT9 517 aaKnown RBP15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 REEP2Q9BRK0 252 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 NFKBIZQ9BYH8 718 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 C17orf75Q9HAS0 396 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 KBTBD4Q9NVX7 518 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 ODF2LQ9ULJ1 636 aa15.99■□□□□ 0.15
DNMT3A-208ENST00000466601 EFCAB14O75071 495 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 SFPQP23246 707 aaKnown RBP eCLIP15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 PEX3P56589 373 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 AMPD3Q01432 767 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 DMP1Q13316 513 aaPredicted RBP15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 RASIP1Q5U651 963 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 FAM43BQ6ZT52 329 aaPredicted RBP15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 ZBTB8OSQ8IWT0 167 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 CEP57L1Q8IYX8 460 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 DEPTORQ8TB45 409 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 DDX12PQ92771 950 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 STAMQ92783 540 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 FTHL17Q9BXU8 183 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 LRRC27Q9C0I9 530 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 C2orf40Q9H1Z8 148 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 TNMDQ9H2S6 317 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 TMX1Q9H3N1 280 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 GOLPH3LQ9H4A5 285 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 MINDY3Q9H8M7 445 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 MAGEF1Q9HAY2 307 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 CXXC1Q9P0U4 656 aaPredicted RBP15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 USP25Q9UHP3 1055 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 SERTAD1Q9UHV2 236 aa15.98■□□□□ 0.15
DNMT3A-208ENST00000466601 CEP290O15078 2479 aa15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 A0A1W2PPC1 479 aa15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 CCDC169A6NNP5 214 aa15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 INO80B-WBP1J3KQ70 363 aa15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 TBCAO75347 108 aaKnown RBP15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 FAM13AO94988 1023 aa15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 SLFN14P0C7P3 912 aa15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 PLS3P13797 630 aa15.97■□□□□ 0.15
DNMT3A-208ENST00000466601 NPTX2P47972 431 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms