RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 BAZ2BQ9UIF8 2168 aaKnown RBP16.79■□□□□ 0.28
HMGXB4-206ENST00000466438 ASPMQ8IZT6 3477 aa16.79■□□□□ 0.28
HMGXB4-206ENST00000466438 ZC3H11AO75152 810 aaKnown RBP eCLIP16.79■□□□□ 0.28
HMGXB4-206ENST00000466438 KLRC2P26717 231 aa16.79■□□□□ 0.28
HMGXB4-206ENST00000466438 NMIQ13287 307 aaPredicted RBP16.79■□□□□ 0.28
HMGXB4-206ENST00000466438 GRM4Q14833 912 aa16.79■□□□□ 0.28
HMGXB4-206ENST00000466438 WTAPQ15007 396 aa16.79■□□□□ 0.28
HMGXB4-206ENST00000466438 KLHL5Q96PQ7 755 aa16.79■□□□□ 0.28
HMGXB4-206ENST00000466438 COL1A2P08123 1366 aa16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 SALL3Q9BXA9 1300 aa16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 DOCK8Q8NF50 2099 aa16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 KANSL1LA0AUZ9 987 aa16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 ANHXE9PGG2 379 aa16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 HBP1O60381 514 aa16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 GPR32O75388 356 aa16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 MAGEA9P43362 315 aa16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 MFAP1P55081 439 aaKnown RBP16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 ACTR2P61160 394 aa16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 SEC23AQ15436 765 aa16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 ZNF598Q86UK7 904 aaKnown RBP16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 RSPH1Q8WYR4 309 aa16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 KRT23Q9C075 422 aa16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 JADE2Q9NQC1 790 aa16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.78■□□□□ 0.28
HMGXB4-206ENST00000466438 FRYQ5TBA9 3013 aa16.77■□□□□ 0.28
HMGXB4-206ENST00000466438 A0A0U1RQF3 1178 aa16.77■□□□□ 0.28
HMGXB4-206ENST00000466438 CCDC195A0A1B0GUA6 201 aa16.77■□□□□ 0.28
HMGXB4-206ENST00000466438 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.77■□□□□ 0.28
HMGXB4-206ENST00000466438 CNPP09543 421 aaKnown RBP16.77■□□□□ 0.28
HMGXB4-206ENST00000466438 PMLP29590 882 aa16.77■□□□□ 0.28
HMGXB4-206ENST00000466438 SHC2P98077 582 aa16.77■□□□□ 0.28
HMGXB4-206ENST00000466438 HTR4Q13639 388 aa16.77■□□□□ 0.28
HMGXB4-206ENST00000466438 SMC5Q8IY18 1101 aa16.77■□□□□ 0.28
HMGXB4-206ENST00000466438 BCL7CQ8WUZ0 217 aaPredicted RBP16.77■□□□□ 0.28
HMGXB4-206ENST00000466438 DDX1Q92499 740 aaKnown RBP16.77■□□□□ 0.28
HMGXB4-206ENST00000466438 DDX23Q9BUQ8 820 aaKnown RBP16.77■□□□□ 0.28
HMGXB4-206ENST00000466438 OSBPL6Q9BZF3 934 aa16.77■□□□□ 0.28
HMGXB4-206ENST00000466438 MAN1C1Q9NR34 630 aa16.77■□□□□ 0.28
HMGXB4-206ENST00000466438 STK39Q9UEW8 545 aa16.77■□□□□ 0.28
HMGXB4-206ENST00000466438 VTNP04004 478 aa16.76■□□□□ 0.27
HMGXB4-206ENST00000466438 LAMP2P13473 410 aa16.76■□□□□ 0.27
HMGXB4-206ENST00000466438 SPEM2Q0P670 501 aa16.76■□□□□ 0.27
HMGXB4-206ENST00000466438 ZNF484Q5JVG2 852 aa16.76■□□□□ 0.27
HMGXB4-206ENST00000466438 SDF4Q9BRK5 362 aa16.76■□□□□ 0.27
HMGXB4-206ENST00000466438 VN1R3Q9BXE9 311 aa16.76■□□□□ 0.27
HMGXB4-206ENST00000466438 CNNM2Q9H8M5 875 aa16.76■□□□□ 0.27
HMGXB4-206ENST00000466438 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.76■□□□□ 0.274e-6■■■■□ 21.4
HMGXB4-206ENST00000466438 ZBTB47Q9UFB7 747 aaPredicted RBP16.76■□□□□ 0.27
HMGXB4-206ENST00000466438 NUMBLQ9Y6R0 609 aa16.76■□□□□ 0.27
HMGXB4-206ENST00000466438 EVPLQ92817 2033 aa16.75■□□□□ 0.27
HMGXB4-206ENST00000466438 NFASCO94856 1347 aa16.75■□□□□ 0.27
HMGXB4-206ENST00000466438 LRP3O75074 770 aa16.75■□□□□ 0.27
HMGXB4-206ENST00000466438 PROS1P07225 676 aa16.75■□□□□ 0.27
HMGXB4-206ENST00000466438 GALTP07902 379 aa16.75■□□□□ 0.27
HMGXB4-206ENST00000466438 PRKCQQ04759 706 aa16.75■□□□□ 0.27
HMGXB4-206ENST00000466438 UBXN2BQ14CS0 331 aa16.75■□□□□ 0.27
HMGXB4-206ENST00000466438 ELMSAN1Q6PJG2 1045 aa16.75■□□□□ 0.27
HMGXB4-206ENST00000466438 BBXQ8WY36 941 aaPredicted RBP16.75■□□□□ 0.27
HMGXB4-206ENST00000466438 FAM126AQ9BYI3 521 aaPredicted RBP16.75■□□□□ 0.27
HMGXB4-206ENST00000466438 DPP7Q9UHL4 492 aa16.75■□□□□ 0.27
HMGXB4-206ENST00000466438 RAB23Q9ULC3 237 aa16.75■□□□□ 0.27
HMGXB4-206ENST00000466438 ZFYVE26Q68DK2 2539 aa16.75■□□□□ 0.27
HMGXB4-206ENST00000466438 SPEGQ15772 3267 aa16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 CEP295Q9C0D2 2601 aa16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 IGKV6D-21A0A0A0MT36 114 aa16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 ZBTB42B2RXF5 422 aa16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 INPPL1O15357 1258 aa16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 ZZEF1O43149 2961 aa16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 LILRB3O75022 631 aa16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 ATG7O95352 703 aa16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 C22orf31O95567 290 aa16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 SNW1Q13573 536 aaKnown RBP16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 MLF2Q15773 248 aaPredicted RBP16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 LAIR1Q6GTX8 287 aa16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 PIBF1Q8WXW3 757 aa16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 SMG7Q92540 1137 aaKnown RBP16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 NRDE2Q9H7Z3 1164 aa16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 PRMT8Q9NR22 394 aaPredicted RBP16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 KCNH7Q9NS40 1196 aa16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 MTF2Q9Y483 593 aaPredicted RBP16.74■□□□□ 0.27
HMGXB4-206ENST00000466438 COL4A3Q01955 1670 aa16.73■□□□□ 0.27
HMGXB4-206ENST00000466438 FAM170BA6NMN3 283 aa16.73■□□□□ 0.27
HMGXB4-206ENST00000466438 EIF4BP23588 611 aaKnown RBP16.73■□□□□ 0.27
HMGXB4-206ENST00000466438 GPC5P78333 572 aa16.73■□□□□ 0.27
HMGXB4-206ENST00000466438 FAM160B1Q5W0V3 765 aa16.73■□□□□ 0.27
HMGXB4-206ENST00000466438 GET4Q7L5D6 327 aaPredicted RBP16.73■□□□□ 0.27
HMGXB4-206ENST00000466438 MRPL17Q9NRX2 175 aaKnown RBP16.73■□□□□ 0.27
HMGXB4-206ENST00000466438 DACT1Q9NYF0 836 aa16.73■□□□□ 0.27
HMGXB4-206ENST00000466438 BACH1O14867 736 aa16.72■□□□□ 0.27
HMGXB4-206ENST00000466438 PAPLNO95428 1278 aa16.72■□□□□ 0.27
HMGXB4-206ENST00000466438 SSBP05455 408 aaKnown RBP eCLIP16.72■□□□□ 0.27
HMGXB4-206ENST00000466438 IMMTQ16891 758 aaKnown RBP16.72■□□□□ 0.27
HMGXB4-206ENST00000466438 TSSK4Q6SA08 328 aa16.72■□□□□ 0.27
HMGXB4-206ENST00000466438 RSPO2Q6UXX9 243 aaPredicted RBP16.72■□□□□ 0.27
HMGXB4-206ENST00000466438 METTL13Q8N6R0 699 aa16.72■□□□□ 0.27
HMGXB4-206ENST00000466438 ZNF707Q96C28 371 aaPredicted RBP16.72■□□□□ 0.27
HMGXB4-206ENST00000466438 LTB4R2Q9NPC1 389 aa16.72■□□□□ 0.27
HMGXB4-206ENST00000466438 TBC1D13Q9NVG8 400 aa16.72■□□□□ 0.27
HMGXB4-206ENST00000466438 MYH15Q9Y2K3 1946 aa16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 RFPL2O75678 378 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms