RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 C8orf48Q96LL4 319 aa8.11□□□□□ -1.11
RPUSD3-212ENST00000466141 DUSP9Q99956 384 aaKnown RBP8.11□□□□□ -1.11
RPUSD3-212ENST00000466141 MAK16Q9BXY0 300 aaKnown RBP8.11□□□□□ -1.11
RPUSD3-212ENST00000466141 TM6SF1Q9BZW5 370 aa8.11□□□□□ -1.11
RPUSD3-212ENST00000466141 TRIM6Q9C030 488 aaPredicted RBP8.11□□□□□ -1.11
RPUSD3-212ENST00000466141 TSPY26PQ9H489 355 aa8.11□□□□□ -1.11
RPUSD3-212ENST00000466141 CCSER2Q9H7U1 834 aa8.11□□□□□ -1.11
RPUSD3-212ENST00000466141 EXOC1Q9NV70 894 aa8.11□□□□□ -1.11
RPUSD3-212ENST00000466141 ADD3Q9UEY8 706 aaKnown RBP8.11□□□□□ -1.11
RPUSD3-212ENST00000466141 PRKAG3Q9UGI9 489 aa8.11□□□□□ -1.11
RPUSD3-212ENST00000466141 MAFFQ9ULX9 164 aa8.11□□□□□ -1.11
RPUSD3-212ENST00000466141 INSL6Q9Y581 213 aa8.11□□□□□ -1.11
RPUSD3-212ENST00000466141 ATG2AQ2TAZ0 1938 aa8.11□□□□□ -1.11
RPUSD3-212ENST00000466141 KLF18A0A0U1RQI7 1052 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 H3BNC9 293 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 KPNA6O60684 536 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 LGR5O75473 907 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 SEC24BO95487 1268 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 MMP3P08254 477 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 HARSP12081 509 aaKnown RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 MSNP26038 577 aaKnown RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 PTPN5P54829 565 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 EVCP57679 992 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 HTRA4P83105 476 aaPredicted RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 FUT2Q10981 343 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 PRPF4BQ13523 1007 aaKnown RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 TOB2Q14106 344 aaPredicted RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 IKBKEQ14164 716 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 MAPRE1Q15691 268 aaKnown RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 SMAD2Q15796 467 aaKnown RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 LY6KQ17RY6 165 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 TRIM71Q2Q1W2 868 aaKnown RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 ACBD5Q5T8D3 534 aaPredicted RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 FBXO11Q86XK2 927 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 SUGP1Q8IWZ8 645 aaKnown RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 SRBD1Q8N5C6 995 aaKnown RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 SVIPQ8NHG7 77 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 SP7Q8TDD2 431 aaPredicted RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 FRS2Q8WU20 508 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 SCFD2Q8WU76 684 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 TSC1Q92574 1164 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 PIGSQ96S52 555 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 ALG1Q9BT22 464 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 OSBPL7Q9BZF2 842 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 UPF3BQ9BZI7 483 aaKnown RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 NSUN3Q9H649 340 aaKnown RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 ZSWIM6Q9HCJ5 1215 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 ALG13Q9NP73 1137 aaKnown RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 FAM217BQ9NTX9 383 aaPredicted RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 HDAC6Q9UBN7 1215 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 BARX2Q9UMQ3 279 aaPredicted RBP8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 SLC12A7Q9Y666 1083 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 C5orf42Q9H799 3197 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 MYO7AQ13402 2215 aa8.1□□□□□ -1.11
RPUSD3-212ENST00000466141 WDR81Q562E7 1941 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 TRIOO75962 3097 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 KMT2EQ8IZD2 1858 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 MICAL3Q7RTP6 2002 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 ZFHX2Q9C0A1 2572 aaPredicted RBP8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 PNMA6FA0A0J9YX94 578 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 TMEM221A6NGB7 291 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 GOLGA8AA7E2F4 631 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 GOLGA8BA8MQT2 603 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 M0R296 226 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 DPYSL4O14531 572 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 NKRFO15226 690 aaKnown RBP eCLIP8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 LINC01565O15544 149 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 ZBTB43O43298 467 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 MBTPS2O43462 519 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 LZTS3O60299 673 aaPredicted RBP8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 TBX10O75333 385 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 E2F6O75461 281 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 UPP2O95045 317 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 LDHAP00338 332 aaKnown RBP8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 PDGFRBP09619 1106 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 ZNF286BP0CG31 522 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 EDNRBP24530 442 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 PSMA5P28066 241 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 SMARCA1P28370 1054 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 RDXP35241 583 aaKnown RBP8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 GNAQP50148 359 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 HSD17B4P51659 736 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 VCPP55072 806 aaKnown RBP8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 RPS6P62753 249 aaKnown RBP8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 FAM160A1Q05DH4 1040 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 APOBRQ0VD83 1088 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 HYAL1Q12794 435 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 PTK7Q13308 1070 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 GNL2Q13823 731 aaKnown RBP8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 MRPL58Q14197 206 aaKnown RBP8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 ELOAQ14241 798 aaKnown RBP8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 SEPT7Q16181 437 aaKnown RBP8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 RTN1Q16799 776 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 PPP1R18Q6NYC8 613 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 RNF207Q6ZRF8 634 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 Q6ZUG5 572 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 CCDC80Q76M96 950 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 RUFY3Q7L099 469 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 SESTD1Q86VW0 696 aa8.09□□□□□ -1.11
RPUSD3-212ENST00000466141 HOMER1Q86YM7 354 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms