RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 SARM1Q6SZW1 724 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 TMEM161BQ8NDZ6 487 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 ASAP3Q8TDY4 903 aa23.9■■□□□ 1.42
ITGA4-204ENST00000465522 PRPF31Q8WWY3 499 aaKnown RBP23.9■■□□□ 1.42
ITGA4-204ENST00000465522 HAS3O00219 553 aa23.89■■□□□ 1.41
ITGA4-204ENST00000465522 ADAMTS4O75173 837 aa23.89■■□□□ 1.41
ITGA4-204ENST00000465522 MYCNP04198 464 aaPredicted RBP23.89■■□□□ 1.41
ITGA4-204ENST00000465522 DEKP35659 375 aaKnown RBP23.89■■□□□ 1.41
ITGA4-204ENST00000465522 NAMPTP43490 491 aa23.89■■□□□ 1.41
ITGA4-204ENST00000465522 MKRN4PQ13434 485 aaPredicted RBP23.89■■□□□ 1.41
ITGA4-204ENST00000465522 MXD4Q14582 209 aaPredicted RBP23.89■■□□□ 1.41
ITGA4-204ENST00000465522 ZCWPW2Q504Y3 356 aa23.89■■□□□ 1.41
ITGA4-204ENST00000465522 CDKAL1Q5VV42 579 aa23.89■■□□□ 1.41
ITGA4-204ENST00000465522 PPP4R3CPQ6ZMV5 832 aa23.89■■□□□ 1.41
ITGA4-204ENST00000465522 NOC3LQ8WTT2 800 aaKnown RBP23.89■■□□□ 1.41
ITGA4-204ENST00000465522 PSPC1Q8WXF1 523 aaKnown RBP23.89■■□□□ 1.41
ITGA4-204ENST00000465522 KIFC3Q9BVG8 833 aa23.89■■□□□ 1.41
ITGA4-204ENST00000465522 THAP9Q9H5L6 903 aa23.89■■□□□ 1.41
ITGA4-204ENST00000465522 SETD4Q9NVD3 440 aa23.89■■□□□ 1.41
ITGA4-204ENST00000465522 SUCLA2Q9P2R7 463 aaPredicted RBP23.89■■□□□ 1.41
ITGA4-204ENST00000465522 PTPN22Q9Y2R2 807 aa23.89■■□□□ 1.41
ITGA4-204ENST00000465522 NRCAMQ92823 1304 aa23.88■■□□□ 1.41
ITGA4-204ENST00000465522 H0YCG3 227 aa23.88■■□□□ 1.41
ITGA4-204ENST00000465522 CALUO43852 315 aaPredicted RBP23.88■■□□□ 1.41
ITGA4-204ENST00000465522 MSCO60682 206 aa23.88■■□□□ 1.41
ITGA4-204ENST00000465522 ADCY5O95622 1261 aa23.88■■□□□ 1.41
ITGA4-204ENST00000465522 FGFR1OPO95684 399 aaKnown RBP23.88■■□□□ 1.41
ITGA4-204ENST00000465522 SMIM10L2AP0DMW4 78 aa23.88■■□□□ 1.41
ITGA4-204ENST00000465522 SMIM10L2BP0DMW5 78 aa23.88■■□□□ 1.41
ITGA4-204ENST00000465522 FKBP3Q00688 224 aaKnown RBP23.88■■□□□ 1.41
ITGA4-204ENST00000465522 MTHFD1LQ6UB35 978 aa23.88■■□□□ 1.41
ITGA4-204ENST00000465522 SYCP3Q8IZU3 236 aa23.88■■□□□ 1.41
ITGA4-204ENST00000465522 ZBTB10Q96DT7 871 aa23.88■■□□□ 1.41
ITGA4-204ENST00000465522 EEF2KMTQ96G04 330 aa23.88■■□□□ 1.41
ITGA4-204ENST00000465522 ACCSQ96QU6 501 aa23.88■■□□□ 1.41
ITGA4-204ENST00000465522 TMEM206Q9H813 350 aa23.88■■□□□ 1.41
ITGA4-204ENST00000465522 TYW1Q9NV66 732 aaKnown RBP23.88■■□□□ 1.41
ITGA4-204ENST00000465522 TRAF3IP3Q9Y228 551 aa23.88■■□□□ 1.41
ITGA4-204ENST00000465522 LRRIQ4A6NIV6 560 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 SERPINC1P01008 464 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 TMOD1P28289 359 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 FANCCQ00597 558 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 CREBRFQ8IUR6 639 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 MTG1Q9BT17 334 aaPredicted RBP23.87■■□□□ 1.41
ITGA4-204ENST00000465522 DENND3A2RUS2 1198 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 ABCD1P33897 745 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 CLCN3P51790 818 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 LAMTOR4Q0VGL1 99 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 EDRF1Q3B7T1 1238 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 MARCH8Q5T0T0 291 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 CXCL17Q6UXB2 119 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 KLHDC9Q8NEP7 349 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 DEPTORQ8TB45 409 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 SH3TC2Q8TF17 1288 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 GBP3Q9H0R5 595 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 TBX20Q9UMR3 447 aa23.87■■□□□ 1.41
ITGA4-204ENST00000465522 ADGRA3Q8IWK6 1321 aa23.86■■□□□ 1.41
ITGA4-204ENST00000465522 SPAG1Q07617 926 aa23.86■■□□□ 1.41
ITGA4-204ENST00000465522 KCNA10Q16322 511 aa23.86■■□□□ 1.41
ITGA4-204ENST00000465522 RNF180Q86T96 592 aa23.86■■□□□ 1.41
ITGA4-204ENST00000465522 RHPN2Q8IUC4 686 aa23.86■■□□□ 1.41
ITGA4-204ENST00000465522 LMBR1Q8WVP7 490 aa23.86■■□□□ 1.41
ITGA4-204ENST00000465522 HVCN1Q96D96 273 aa23.86■■□□□ 1.41
ITGA4-204ENST00000465522 ARHGAP28Q9P2N2 729 aa23.86■■□□□ 1.41
ITGA4-204ENST00000465522 MAGEC2Q9UBF1 373 aaPredicted RBP23.86■■□□□ 1.41
ITGA4-204ENST00000465522 ASAP2O43150 1006 aa23.85■■□□□ 1.41
ITGA4-204ENST00000465522 TGFB1I1O43294 461 aa23.85■■□□□ 1.41
ITGA4-204ENST00000465522 SCP2P22307 547 aa23.85■■□□□ 1.41
ITGA4-204ENST00000465522 CST5P28325 142 aaPredicted RBP23.85■■□□□ 1.41
ITGA4-204ENST00000465522 ADAM9Q13443 819 aa23.85■■□□□ 1.41
ITGA4-204ENST00000465522 CAPSQ13938 189 aa23.85■■□□□ 1.41
ITGA4-204ENST00000465522 NFRKBQ6P4R8 1299 aa23.85■■□□□ 1.41
ITGA4-204ENST00000465522 HS2ST1Q7LGA3 356 aa23.85■■□□□ 1.41
ITGA4-204ENST00000465522 IRF2BP1Q8IU81 584 aa23.85■■□□□ 1.41
ITGA4-204ENST00000465522 FAM114A1Q8IWE2 563 aa23.85■■□□□ 1.41
ITGA4-204ENST00000465522 C7orf31Q8N865 590 aa23.85■■□□□ 1.41
ITGA4-204ENST00000465522 PCSK9Q8NBP7 692 aaKnown RBP23.85■■□□□ 1.41
ITGA4-204ENST00000465522 ANKRD20A12PQ8NF67 263 aa23.85■■□□□ 1.41
ITGA4-204ENST00000465522 PPP1R13LQ8WUF5 828 aa23.85■■□□□ 1.41
ITGA4-204ENST00000465522 EXOC7Q9UPT5 735 aa23.85■■□□□ 1.41
ITGA4-204ENST00000465522 ZMYM2Q9UBW7 1377 aa23.85■■□□□ 1.41
ITGA4-204ENST00000465522 KCNJ18B7U540 433 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 ASGR1P07306 291 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 SRGAP2CP0DJJ0 459 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 UBASH3AP57075 661 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 KCNJ12Q14500 433 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 TCP11X2Q5H9J9 407 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 IKZF4Q9H2S9 585 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 IFNKQ9P0W0 207 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 K7ERI5 159 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 ZNF75DP51815 510 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 LINC01465Q8N7H1 131 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 GOLGA5Q8TBA6 731 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 CEP63Q96MT8 703 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 CTAGE1Q96RT6 745 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 HDAC6Q9UBN7 1215 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 AKT3Q9Y243 479 aa23.84■■□□□ 1.41
ITGA4-204ENST00000465522 TRIP12Q14669 1992 aaPredicted RBP23.83■■□□□ 1.41
ITGA4-204ENST00000465522 CETN3O15182 167 aa23.83■■□□□ 1.41
ITGA4-204ENST00000465522 CLIC2O15247 247 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms