RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 GUCY2DQ02846 1103 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 SF3B2Q13435 895 aaKnown RBP20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 FAM153CQ494X1 144 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 PCNX4Q63HM2 1172 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 CIAPIN1Q6FI81 312 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 H2AFVQ71UI9 128 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 PALB2Q86YC2 1186 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 PROCA1Q8NCQ7 364 aaPredicted RBP20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 LMO3Q8TAP4 145 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 BBXQ8WY36 941 aaPredicted RBP20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 FAM153AQ9UHL3 310 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 IGSF9BQ9UPX0 1349 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 MYCLP12524 364 aaPredicted RBP20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 CAPN2P17655 700 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 PGM5Q15124 567 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 KLHL7Q8IXQ5 586 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 NEK9Q8TD19 979 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 RUBCNQ92622 972 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 GDF3Q9NR23 364 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 APEX2Q9UBZ4 518 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 NFU1Q9UMS0 254 aa20.34■□□□□ 0.85
TSPAN4-210ENST00000464987 RAD51CO43502 376 aa20.33■□□□□ 0.85
TSPAN4-210ENST00000464987 MTMR2Q13614 643 aa20.33■□□□□ 0.85
TSPAN4-210ENST00000464987 PPP2R5AQ15172 486 aa20.33■□□□□ 0.85
TSPAN4-210ENST00000464987 GLE1Q53GS7 698 aaKnown RBP20.33■□□□□ 0.85
TSPAN4-210ENST00000464987 VPS36Q86VN1 386 aa20.33■□□□□ 0.85
TSPAN4-210ENST00000464987 METTL13Q8N6R0 699 aa20.33■□□□□ 0.85
TSPAN4-210ENST00000464987 IFT81Q8WYA0 676 aa20.33■□□□□ 0.85
TSPAN4-210ENST00000464987 SYT11Q9BT88 431 aa20.33■□□□□ 0.85
TSPAN4-210ENST00000464987 TAS2R14Q9NYV8 317 aa20.33■□□□□ 0.85
TSPAN4-210ENST00000464987 TMEM59LQ9UK28 342 aa20.33■□□□□ 0.85
TSPAN4-210ENST00000464987 VCAM1P19320 739 aa20.33■□□□□ 0.84
TSPAN4-210ENST00000464987 QARSP47897 775 aaKnown RBP20.33■□□□□ 0.84
TSPAN4-210ENST00000464987 PPP3CAQ08209 521 aa20.33■□□□□ 0.84
TSPAN4-210ENST00000464987 SLC9A9Q8IVB4 645 aa20.33■□□□□ 0.84
TSPAN4-210ENST00000464987 TAF4BQ92750 862 aa20.33■□□□□ 0.84
TSPAN4-210ENST00000464987 KIAA1683Q9H0B3 1180 aa20.33■□□□□ 0.84
TSPAN4-210ENST00000464987 LARSQ9P2J5 1176 aaKnown RBP20.33■□□□□ 0.84
TSPAN4-210ENST00000464987 EMSYQ7Z589 1322 aa20.33■□□□□ 0.84
TSPAN4-210ENST00000464987 BACH1O14867 736 aa20.32■□□□□ 0.84
TSPAN4-210ENST00000464987 CEP104O60308 925 aa20.32■□□□□ 0.84
TSPAN4-210ENST00000464987 ABCB4P21439 1286 aa20.32■□□□□ 0.84
TSPAN4-210ENST00000464987 TNFRSF8P28908 595 aa20.32■□□□□ 0.84
TSPAN4-210ENST00000464987 YWHABP31946 246 aaKnown RBP20.32■□□□□ 0.84
TSPAN4-210ENST00000464987 ZSCAN26Q16670 478 aa20.32■□□□□ 0.84
TSPAN4-210ENST00000464987 PLA2G4FQ68DD2 849 aa20.32■□□□□ 0.84
TSPAN4-210ENST00000464987 MCF2L2Q86YR7 1114 aa20.32■□□□□ 0.84
TSPAN4-210ENST00000464987 PLEKHO2Q8TD55 490 aa20.32■□□□□ 0.84
TSPAN4-210ENST00000464987 CASKIN2Q8WXE0 1202 aa20.32■□□□□ 0.84
TSPAN4-210ENST00000464987 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.32■□□□□ 0.844e-7■■■■■ 121.4
TSPAN4-210ENST00000464987 FZD1Q9UP38 647 aa20.32■□□□□ 0.84
TSPAN4-210ENST00000464987 RIPK3Q9Y572 518 aa20.32■□□□□ 0.84
TSPAN4-210ENST00000464987 FOXN3O00409 490 aaPredicted RBP20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 NPEPPSP55786 919 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 GHRHRQ02643 423 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 TNIP1Q15025 636 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 NIPA1Q7RTP0 329 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 SAMD7Q7Z3H4 446 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 DAAM2Q86T65 1068 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 AFAP1L1Q8TED9 768 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 LPAR1Q92633 364 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 AP1M1Q9BXS5 423 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 STXBP5LQ9Y2K9 1186 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 CCNE2O96020 404 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 C1orf220Q5T0J3 134 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 EMBQ6PCB8 327 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 PEX26Q7Z412 305 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 SLFN11Q7Z7L1 901 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 ARHGEF19Q8IW93 802 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 RPAP3Q9H6T3 665 aaPredicted RBP20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 DBR1Q9UK59 544 aaKnown RBP20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 PPP1R9AQ9ULJ8 1098 aa20.31■□□□□ 0.84
TSPAN4-210ENST00000464987 SLC16A4O15374 487 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 PLS3P13797 630 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 ANXA13P27216 316 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 ACTN2P35609 894 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 GCLMP48507 274 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 PEX3P56589 373 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 IFI16Q16666 785 aaKnown RBP20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 NSMFQ6X4W1 530 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 NT5DC3Q86UY8 548 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 IFT20Q8IY31 132 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 GOLGA5Q8TBA6 731 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 SLC35G2Q8TBE7 412 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 CAVIN3Q969G5 261 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 ARHGEF26Q96DR7 871 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 VPS33BQ9H267 617 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 TESPA1A2RU30 521 aaPredicted RBP20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 TULP1O00294 542 aaPredicted RBP20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 HAUS6Q7Z4H7 955 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 SLC20A1Q8WUM9 679 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 TRERF1Q96PN7 1200 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 RMDN3Q96TC7 470 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 KIFC3Q9BVG8 833 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 SEPT11Q9NVA2 429 aaKnown RBP20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 CALCOCO1Q9P1Z2 691 aa20.3■□□□□ 0.84
TSPAN4-210ENST00000464987 A0A0A6YYK5 440 aaPredicted RBP20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 GOLGA8IPA6NC78 632 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 GOLGA8JA6NMD2 632 aa20.29■□□□□ 0.84
TSPAN4-210ENST00000464987 VAMP7P51809 220 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms