RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 GALR2O43603 387 aaPredicted RBP19.5■□□□□ 0.71
HMGN1-209ENST00000463631 GFRA3O60609 400 aa19.5■□□□□ 0.71
HMGN1-209ENST00000463631 SP100P23497 879 aaPredicted RBP19.5■□□□□ 0.71
HMGN1-209ENST00000463631 ALDH7A1P49419 539 aaKnown RBP19.5■□□□□ 0.71
HMGN1-209ENST00000463631 BCAR1P56945 870 aa19.5■□□□□ 0.71
HMGN1-209ENST00000463631 IRX6P78412 446 aaPredicted RBP19.5■□□□□ 0.71
HMGN1-209ENST00000463631 CDC42EP1Q00587 391 aa19.5■□□□□ 0.71
HMGN1-209ENST00000463631 BMS1Q14692 1282 aaKnown RBP19.5■□□□□ 0.71
HMGN1-209ENST00000463631 UGCGQ16739 394 aa19.5■□□□□ 0.71
HMGN1-209ENST00000463631 FBXL16Q8N461 479 aa19.5■□□□□ 0.71
HMGN1-209ENST00000463631 RDM1Q8NG50 284 aa19.5■□□□□ 0.71
HMGN1-209ENST00000463631 TMEM169Q96HH4 297 aa19.5■□□□□ 0.71
HMGN1-209ENST00000463631 SCLT1Q96NL6 688 aa19.5■□□□□ 0.71
HMGN1-209ENST00000463631 ZBP1Q9H171 429 aa19.5■□□□□ 0.71
HMGN1-209ENST00000463631 TSHZ2Q9NRE2 1034 aa19.5■□□□□ 0.71
HMGN1-209ENST00000463631 FAM86C1Q9NVL1 165 aa19.5■□□□□ 0.71
HMGN1-209ENST00000463631 WDR87Q6ZQQ6 2873 aa19.5■□□□□ 0.71
HMGN1-209ENST00000463631 EDIL3O43854 480 aa19.49■□□□□ 0.71
HMGN1-209ENST00000463631 GAS7O60861 476 aa19.49■□□□□ 0.71
HMGN1-209ENST00000463631 BRD1O95696 1058 aa19.49■□□□□ 0.71
HMGN1-209ENST00000463631 USP11P51784 963 aa19.49■□□□□ 0.71
HMGN1-209ENST00000463631 POLGP54098 1239 aaPredicted RBP19.49■□□□□ 0.71
HMGN1-209ENST00000463631 FGD1P98174 961 aa19.49■□□□□ 0.71
HMGN1-209ENST00000463631 KIAA1841Q6NSI8 718 aa19.49■□□□□ 0.71
HMGN1-209ENST00000463631 NLRP7Q8WX94 980 aa19.49■□□□□ 0.71
HMGN1-209ENST00000463631 ATOH1Q92858 354 aaPredicted RBP19.49■□□□□ 0.71
HMGN1-209ENST00000463631 RNF26Q9BY78 433 aaPredicted RBP19.49■□□□□ 0.71
HMGN1-209ENST00000463631 NAP1L2Q9ULW6 460 aaPredicted RBP19.49■□□□□ 0.71
HMGN1-209ENST00000463631 USTQ9Y2C2 406 aa19.49■□□□□ 0.71
HMGN1-209ENST00000463631 IGKV6-21A0A0C4DH24 114 aa19.48■□□□□ 0.71
HMGN1-209ENST00000463631 PHKA2P46019 1235 aa19.48■□□□□ 0.71
HMGN1-209ENST00000463631 GIT2Q14161 759 aa19.48■□□□□ 0.71
HMGN1-209ENST00000463631 NTRK3Q16288 839 aa19.48■□□□□ 0.71
HMGN1-209ENST00000463631 LRCH2Q5VUJ6 765 aa19.48■□□□□ 0.71
HMGN1-209ENST00000463631 ZDHHC14Q8IZN3 488 aa19.48■□□□□ 0.71
HMGN1-209ENST00000463631 KCNB2Q92953 911 aa19.48■□□□□ 0.71
HMGN1-209ENST00000463631 BRF1Q92994 677 aa19.48■□□□□ 0.71
HMGN1-209ENST00000463631 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
HMGN1-209ENST00000463631 ZNF668Q96K58 619 aaPredicted RBP19.48■□□□□ 0.71
HMGN1-209ENST00000463631 CEP89Q96ST8 783 aa19.48■□□□□ 0.71
HMGN1-209ENST00000463631 NIFKQ9BYG3 293 aaKnown RBP19.48■□□□□ 0.71
HMGN1-209ENST00000463631 GCOM2Q9BZD3 368 aaPredicted RBP19.48■□□□□ 0.71
HMGN1-209ENST00000463631 ZNF292O60281 2723 aa19.47■□□□□ 0.71
HMGN1-209ENST00000463631 VPS13AQ96RL7 3174 aa19.47■□□□□ 0.71
HMGN1-209ENST00000463631 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.47■□□□□ 0.71
HMGN1-209ENST00000463631 PSMD10O75832 226 aa19.47■□□□□ 0.71
HMGN1-209ENST00000463631 FGFR4P22455 802 aa19.47■□□□□ 0.71
HMGN1-209ENST00000463631 SFPQP23246 707 aaKnown RBP eCLIP19.47■□□□□ 0.71
HMGN1-209ENST00000463631 DRP2Q13474 957 aa19.47■□□□□ 0.71
HMGN1-209ENST00000463631 B3GNT9Q6UX72 402 aa19.47■□□□□ 0.71
HMGN1-209ENST00000463631 DDX53Q86TM3 631 aaKnown RBP19.47■□□□□ 0.71
HMGN1-209ENST00000463631 ZNF410Q86VK4 478 aa19.47■□□□□ 0.71
HMGN1-209ENST00000463631 TMEM173Q86WV6 379 aaPredicted RBP19.47■□□□□ 0.71
HMGN1-209ENST00000463631 VPS52Q8N1B4 723 aa19.47■□□□□ 0.71
HMGN1-209ENST00000463631 TDRD5Q8NAT2 981 aaKnown RBP19.47■□□□□ 0.71
HMGN1-209ENST00000463631 PHKBQ93100 1093 aa19.47■□□□□ 0.71
HMGN1-209ENST00000463631 TEKT3Q9BXF9 490 aa19.47■□□□□ 0.71
HMGN1-209ENST00000463631 AGXT2Q9BYV1 514 aa19.47■□□□□ 0.71
HMGN1-209ENST00000463631 UNC45AQ9H3U1 944 aa19.47■□□□□ 0.71
HMGN1-209ENST00000463631 CHMP2AO43633 222 aa19.46■□□□□ 0.71
HMGN1-209ENST00000463631 ZC3H11AO75152 810 aaKnown RBP eCLIP19.46■□□□□ 0.71
HMGN1-209ENST00000463631 CXCL14O95715 111 aa19.46■□□□□ 0.71
HMGN1-209ENST00000463631 CTSAP10619 480 aa19.46■□□□□ 0.71
HMGN1-209ENST00000463631 SKIP12755 728 aa19.46■□□□□ 0.71
HMGN1-209ENST00000463631 RAB27AP51159 221 aa19.46■□□□□ 0.71
HMGN1-209ENST00000463631 AKAP17AQ02040 695 aaKnown RBP19.46■□□□□ 0.71
HMGN1-209ENST00000463631 XKR3Q5GH77 459 aa19.46■□□□□ 0.71
HMGN1-209ENST00000463631 GLB1LQ6UWU2 654 aa19.46■□□□□ 0.71
HMGN1-209ENST00000463631 Q6ZUG5 572 aa19.46■□□□□ 0.71
HMGN1-209ENST00000463631 IGSF21Q96ID5 467 aa19.46■□□□□ 0.71
HMGN1-209ENST00000463631 SH3GLB2Q9NR46 395 aa19.46■□□□□ 0.71
HMGN1-209ENST00000463631 TBC1D13Q9NVG8 400 aa19.46■□□□□ 0.71
HMGN1-209ENST00000463631 CACNA1AO00555 2505 aa19.45■□□□□ 0.7
HMGN1-209ENST00000463631 NT5C1B-RDH14C9J2C7 533 aa19.45■□□□□ 0.7
HMGN1-209ENST00000463631 H0Y858 1186 aa19.45■□□□□ 0.7
HMGN1-209ENST00000463631 ZNF623O75123 536 aa19.45■□□□□ 0.7
HMGN1-209ENST00000463631 CDC45O75419 566 aa19.45■□□□□ 0.7
HMGN1-209ENST00000463631 CSDE1O75534 798 aaKnown RBP19.45■□□□□ 0.7
HMGN1-209ENST00000463631 STBD1O95210 358 aa19.45■□□□□ 0.7
HMGN1-209ENST00000463631 CPA1P15085 419 aa19.45■□□□□ 0.7
HMGN1-209ENST00000463631 IFNAR1P17181 557 aa19.45■□□□□ 0.7
HMGN1-209ENST00000463631 Q4G0T1 1027 aa19.45■□□□□ 0.7
HMGN1-209ENST00000463631 ATAT1Q5SQI0 421 aa19.45■□□□□ 0.7
HMGN1-209ENST00000463631 RARS2Q5T160 578 aaKnown RBP19.45■□□□□ 0.7
HMGN1-209ENST00000463631 PLCD3Q8N3E9 789 aa19.45■□□□□ 0.7
HMGN1-209ENST00000463631 TMEM105Q8N8V8 129 aa19.45■□□□□ 0.7
HMGN1-209ENST00000463631 SLC22A17Q8WUG5 538 aa19.45■□□□□ 0.7
HMGN1-209ENST00000463631 C22orf23Q9BZE7 217 aa19.45■□□□□ 0.7
HMGN1-209ENST00000463631 INO80BQ9C086 356 aaPredicted RBP19.45■□□□□ 0.7
HMGN1-209ENST00000463631 SEPT9Q9UHD8 586 aaPredicted RBP19.45■□□□□ 0.7
HMGN1-209ENST00000463631 EPCAMP16422 314 aa19.44■□□□□ 0.7
HMGN1-209ENST00000463631 NBL1P41271 181 aa19.44■□□□□ 0.7
HMGN1-209ENST00000463631 DNM2P50570 870 aa19.44■□□□□ 0.7
HMGN1-209ENST00000463631 NOMO2Q5JPE7 1267 aa19.44■□□□□ 0.7
HMGN1-209ENST00000463631 TWF2Q6IBS0 349 aaKnown RBP19.44■□□□□ 0.7
HMGN1-209ENST00000463631 BCL7CQ8WUZ0 217 aaPredicted RBP19.44■□□□□ 0.7
HMGN1-209ENST00000463631 JAKMIP1Q96N16 626 aaKnown RBP19.44■□□□□ 0.7
HMGN1-209ENST00000463631 FAM105AQ9NUU6 356 aa19.44■□□□□ 0.7
HMGN1-209ENST00000463631 VPS54Q9P1Q0 977 aa19.44■□□□□ 0.7
HMGN1-209ENST00000463631 STK39Q9UEW8 545 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms