RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 SMC1AQ14683 1233 aaKnown RBP17.24■□□□□ 0.35
CMSS1-202ENST00000463526 TARBP2Q15633 366 aaKnown RBP17.24■□□□□ 0.35
CMSS1-202ENST00000463526 ZNF598Q86UK7 904 aaKnown RBP17.24■□□□□ 0.35
CMSS1-202ENST00000463526 ZNF710Q8N1W2 664 aa17.24■□□□□ 0.35
CMSS1-202ENST00000463526 MRPL43Q8N983 215 aaKnown RBP17.24■□□□□ 0.35
CMSS1-202ENST00000463526 CASP10Q92851 521 aa17.24■□□□□ 0.35
CMSS1-202ENST00000463526 LPPQ93052 612 aa17.24■□□□□ 0.35
CMSS1-202ENST00000463526 FDXACB1Q9BRP7 624 aaPredicted RBP17.24■□□□□ 0.35
CMSS1-202ENST00000463526 DACT1Q9NYF0 836 aa17.24■□□□□ 0.35
CMSS1-202ENST00000463526 WDFY4Q6ZS81 3184 aa17.24■□□□□ 0.35
CMSS1-202ENST00000463526 NID2Q14112 1375 aa17.24■□□□□ 0.35
CMSS1-202ENST00000463526 C2orf71A6NGG8 1288 aa17.23■□□□□ 0.35
CMSS1-202ENST00000463526 CLASP2O75122 1294 aaKnown RBP17.23■□□□□ 0.35
CMSS1-202ENST00000463526 PSMD10O75832 226 aa17.23■□□□□ 0.35
CMSS1-202ENST00000463526 HOXB8P17481 243 aaPredicted RBP17.23■□□□□ 0.35
CMSS1-202ENST00000463526 VCPP55072 806 aaKnown RBP17.23■□□□□ 0.35
CMSS1-202ENST00000463526 SSRP1Q08945 709 aaKnown RBP17.23■□□□□ 0.35
CMSS1-202ENST00000463526 PTPN21Q16825 1174 aa17.23■□□□□ 0.35
CMSS1-202ENST00000463526 XKR3Q5GH77 459 aa17.23■□□□□ 0.35
CMSS1-202ENST00000463526 TWF2Q6IBS0 349 aaKnown RBP17.23■□□□□ 0.35
CMSS1-202ENST00000463526 TRIM22Q8IYM9 498 aa17.23■□□□□ 0.35
CMSS1-202ENST00000463526 TMEM87AQ8NBN3 555 aa17.23■□□□□ 0.35
CMSS1-202ENST00000463526 AUTS2Q8WXX7 1259 aa17.23■□□□□ 0.35
CMSS1-202ENST00000463526 AGXT2Q9BYV1 514 aa17.23■□□□□ 0.35
CMSS1-202ENST00000463526 SH3GLB2Q9NR46 395 aa17.23■□□□□ 0.35
CMSS1-202ENST00000463526 SUCLA2Q9P2R7 463 aaPredicted RBP17.23■□□□□ 0.35
CMSS1-202ENST00000463526 PCDHA4Q9UN74 947 aa17.23■□□□□ 0.35
CMSS1-202ENST00000463526 INPP5FQ9Y2H2 1132 aa17.23■□□□□ 0.35
CMSS1-202ENST00000463526 HCFC2Q9Y5Z7 792 aa17.23■□□□□ 0.35
CMSS1-202ENST00000463526 ZDBF2Q9HCK1 2354 aa17.23■□□□□ 0.35
CMSS1-202ENST00000463526 ZC3H11AO75152 810 aaKnown RBP eCLIP17.22■□□□□ 0.35
CMSS1-202ENST00000463526 DNM2P50570 870 aa17.22■□□□□ 0.35
CMSS1-202ENST00000463526 PTPN5P54829 565 aa17.22■□□□□ 0.35
CMSS1-202ENST00000463526 Q4G0T1 1027 aa17.22■□□□□ 0.35
CMSS1-202ENST00000463526 TPRNQ4KMQ1 711 aa17.22■□□□□ 0.35
CMSS1-202ENST00000463526 CES5AQ6NT32 575 aa17.22■□□□□ 0.35
CMSS1-202ENST00000463526 KANK3Q6NY19 840 aa17.22■□□□□ 0.35
CMSS1-202ENST00000463526 RHPN2Q8IUC4 686 aa17.22■□□□□ 0.35
CMSS1-202ENST00000463526 KSR1Q8IVT5 923 aa17.22■□□□□ 0.35
CMSS1-202ENST00000463526 VPS52Q8N1B4 723 aa17.22■□□□□ 0.35
CMSS1-202ENST00000463526 FBXL16Q8N461 479 aa17.22■□□□□ 0.35
CMSS1-202ENST00000463526 C12orf76Q8N812 135 aaPredicted RBP17.22■□□□□ 0.35
CMSS1-202ENST00000463526 TMEM169Q96HH4 297 aa17.22■□□□□ 0.35
CMSS1-202ENST00000463526 MRPL9Q9BYD2 267 aaKnown RBP17.22■□□□□ 0.35
CMSS1-202ENST00000463526 NIFKQ9BYG3 293 aaKnown RBP17.22■□□□□ 0.35
CMSS1-202ENST00000463526 PIN4Q9Y237 131 aaKnown RBP17.22■□□□□ 0.35
CMSS1-202ENST00000463526 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.21■□□□□ 0.35
CMSS1-202ENST00000463526 CPLX1O14810 134 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 STBD1O95210 358 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 PDGFBP01127 241 aaPredicted RBP17.21■□□□□ 0.35
CMSS1-202ENST00000463526 PHKA2P46019 1235 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 TCF15Q12870 199 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 STK3Q13188 491 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 BMS1Q14692 1282 aaKnown RBP17.21■□□□□ 0.35
CMSS1-202ENST00000463526 RARS2Q5T160 578 aaKnown RBP17.21■□□□□ 0.35
CMSS1-202ENST00000463526 PLA2G4FQ68DD2 849 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 CATSPER4Q7RTX7 472 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 TMEM173Q86WV6 379 aaPredicted RBP17.21■□□□□ 0.35
CMSS1-202ENST00000463526 BLIDQ8IZY5 108 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 KREMEN2Q8NCW0 462 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 RDM1Q8NG50 284 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 ASIC4Q96FT7 647 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 NLRP4Q96MN2 994 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 AIFM3Q96NN9 605 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 C22orf23Q9BZE7 217 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 GBP3Q9H0R5 595 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 POMKQ9H5K3 350 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 CHST12Q9NRB3 414 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 FAM86C1Q9NVL1 165 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 NR2E1Q9Y466 385 aa17.21■□□□□ 0.35
CMSS1-202ENST00000463526 MEIS3P2A8K0S8 358 aa17.2■□□□□ 0.34
CMSS1-202ENST00000463526 C2CD4DB7Z1M9 353 aa17.2■□□□□ 0.34
CMSS1-202ENST00000463526 SFPQP23246 707 aaKnown RBP eCLIP17.2■□□□□ 0.346e-6■■□□□ 12.5
CMSS1-202ENST00000463526 AVPR2P30518 371 aa17.2■□□□□ 0.34
CMSS1-202ENST00000463526 CDC42EP1Q00587 391 aa17.2■□□□□ 0.34
CMSS1-202ENST00000463526 TOB2Q14106 344 aaPredicted RBP17.2■□□□□ 0.34
CMSS1-202ENST00000463526 CEP89Q96ST8 783 aa17.2■□□□□ 0.34
CMSS1-202ENST00000463526 ADAM7Q9H2U9 754 aa17.2■□□□□ 0.34
CMSS1-202ENST00000463526 CYP3A7-CYP3A51PA0A087WV96 503 aa17.19■□□□□ 0.34
CMSS1-202ENST00000463526 IGKV6-21A0A0C4DH24 114 aa17.19■□□□□ 0.34
CMSS1-202ENST00000463526 REC8O95072 547 aa17.19■□□□□ 0.34
CMSS1-202ENST00000463526 CYP3A7P24462 503 aa17.19■□□□□ 0.34
CMSS1-202ENST00000463526 EVCP57679 992 aa17.19■□□□□ 0.34
CMSS1-202ENST00000463526 RNASELQ05823 741 aaKnown RBP17.19■□□□□ 0.34
CMSS1-202ENST00000463526 ITIH3Q06033 890 aa17.19■□□□□ 0.34
CMSS1-202ENST00000463526 INF2Q27J81 1249 aa17.19■□□□□ 0.34
CMSS1-202ENST00000463526 NOMO2Q5JPE7 1267 aa17.19■□□□□ 0.34
CMSS1-202ENST00000463526 GLB1LQ6UWU2 654 aa17.19■□□□□ 0.34
CMSS1-202ENST00000463526 RUFY3Q7L099 469 aa17.19■□□□□ 0.34
CMSS1-202ENST00000463526 PRRX2Q99811 253 aa17.19■□□□□ 0.34
CMSS1-202ENST00000463526 INO80BQ9C086 356 aaPredicted RBP17.19■□□□□ 0.34
CMSS1-202ENST00000463526 SLKQ9H2G2 1235 aaPredicted RBP17.19■□□□□ 0.34
CMSS1-202ENST00000463526 NRDE2Q9H7Z3 1164 aa17.19■□□□□ 0.34
CMSS1-202ENST00000463526 FAM105AQ9NUU6 356 aa17.19■□□□□ 0.34
CMSS1-202ENST00000463526 TBC1D13Q9NVG8 400 aa17.19■□□□□ 0.34
CMSS1-202ENST00000463526 DDX25Q9UHL0 483 aaKnown RBP17.19■□□□□ 0.34
CMSS1-202ENST00000463526 EML1O00423 815 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 MAFO75444 373 aaPredicted RBP17.18■□□□□ 0.34
CMSS1-202ENST00000463526 DEXIO95424 95 aa17.18■□□□□ 0.34
CMSS1-202ENST00000463526 GALTP07902 379 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms