RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 PWP2Q15269 919 aaKnown RBP15.84■□□□□ 0.13
HDAC6-213ENST00000462730 ARMCX2Q7L311 632 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 GPR142Q7Z601 462 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 GPIHBP1Q8IV16 184 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 CCDC170Q8IYT3 715 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 ABRAQ8N0Z2 381 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 MKNK1Q9BUB5 465 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 TMEM206Q9H813 350 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 GPBP1L1Q9HC44 474 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-213ENST00000462730 NLRC4Q9NPP4 1024 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 PLAGL2Q9UPG8 496 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 ASB14A6NK59 587 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 KIF5CO60282 957 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 ATG7O95352 703 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 ARHGAP25P42331 645 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 NCKAP1LP55160 1127 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 POLR2FP61218 127 aaKnown RBP15.84■□□□□ 0.13
HDAC6-213ENST00000462730 APBA1Q02410 837 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 ZNF792Q3KQV3 632 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 METTL7BQ6UX53 244 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 HAUS6Q7Z4H7 955 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 SLC35C1Q96A29 364 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 BORCS6Q96GS4 357 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 IRX2Q9BZI1 471 aaPredicted RBP15.84■□□□□ 0.13
HDAC6-213ENST00000462730 GANQ9H2C0 597 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 ZNF302Q9NR11 478 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 FRMD4BQ9Y2L6 1034 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 ADGRA2Q96PE1 1338 aa15.83■□□□□ 0.13
HDAC6-213ENST00000462730 STRNO43815 780 aa15.83■□□□□ 0.12
HDAC6-213ENST00000462730 GTF2BQ00403 316 aa15.83■□□□□ 0.12
HDAC6-213ENST00000462730 GRB14Q14449 540 aa15.83■□□□□ 0.12
HDAC6-213ENST00000462730 KCNV1Q6PIU1 500 aa15.83■□□□□ 0.12
HDAC6-213ENST00000462730 KRT222Q8N1A0 295 aa15.83■□□□□ 0.12
HDAC6-213ENST00000462730 KIFAP3Q92845 792 aa15.83■□□□□ 0.12
HDAC6-213ENST00000462730 ST6GALNAC4Q9H4F1 302 aa15.83■□□□□ 0.12
HDAC6-213ENST00000462730 CPA4Q9UI42 421 aa15.83■□□□□ 0.12
HDAC6-213ENST00000462730 TLL2Q9Y6L7 1015 aa15.83■□□□□ 0.12
HDAC6-213ENST00000462730 ZNF236Q9UL36 1845 aa15.83■□□□□ 0.12
HDAC6-213ENST00000462730 CCDC169A6NNP5 214 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 EIF3CLB5ME19 914 aaKnown RBP15.82■□□□□ 0.12
HDAC6-213ENST00000462730 PLEKP08567 350 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-213ENST00000462730 SOX10P56693 466 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 KRT83P78385 493 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 DMP1Q13316 513 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-213ENST00000462730 XKR3Q5GH77 459 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 SLC9A9Q8IVB4 645 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 SLC17A8Q8NDX2 589 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 CCDC42Q96M95 316 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 EIF3CQ99613 913 aaKnown RBP15.82■□□□□ 0.12
HDAC6-213ENST00000462730 MLXIPQ9HAP2 919 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 CYP26B1Q9NR63 512 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 ARHGAP20Q9P2F6 1191 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 MAFBQ9Y5Q3 323 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-213ENST00000462730 IGKV6D-21A0A0A0MT36 114 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 GSTTP1A0A1W2PQM5 241 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 TISP43B9A030 160 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 EXOC3O60645 756 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 DGAT1O75907 488 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 URI1O94763 535 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-213ENST00000462730 IPO7O95373 1038 aaKnown RBP15.82■□□□□ 0.12
HDAC6-213ENST00000462730 ABL1P00519 1130 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 ACTN1P12814 892 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 EIF4A3P38919 411 aaKnown RBP15.82■□□□□ 0.12
HDAC6-213ENST00000462730 NPTX2P47972 431 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 MYBPC2Q14324 1141 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 TAF1CQ15572 869 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-213ENST00000462730 EXOC3L4Q17RC7 722 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 MTERF2Q49AM1 385 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 SFMBT2Q5VUG0 894 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 KIAA1328Q86T90 577 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 MCPH1Q8NEM0 835 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 BSNDQ8WZ55 320 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 KIFC3Q9BVG8 833 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 NUCKS1Q9H1E3 243 aaKnown RBP15.82■□□□□ 0.12
HDAC6-213ENST00000462730 ATP6V0A4Q9HBG4 840 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 ZCCHC17Q9NP64 241 aaKnown RBP15.82■□□□□ 0.12
HDAC6-213ENST00000462730 FAM53CQ9NYF3 392 aa15.82■□□□□ 0.12
HDAC6-213ENST00000462730 KIF3CO14782 793 aa15.81■□□□□ 0.12
HDAC6-213ENST00000462730 OATP04181 439 aa15.81■□□□□ 0.12
HDAC6-213ENST00000462730 SLC9A1P19634 815 aa15.81■□□□□ 0.12
HDAC6-213ENST00000462730 ATP4AP20648 1035 aa15.81■□□□□ 0.12
HDAC6-213ENST00000462730 MAPK4P31152 587 aa15.81■□□□□ 0.12
HDAC6-213ENST00000462730 TCF7P36402 384 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-213ENST00000462730 SMTNP53814 917 aa15.81■□□□□ 0.12
HDAC6-213ENST00000462730 ZNF569Q5MCW4 686 aa15.81■□□□□ 0.12
HDAC6-213ENST00000462730 GBP6Q6ZN66 633 aa15.81■□□□□ 0.12
HDAC6-213ENST00000462730 PLEKHH3Q7Z736 793 aa15.81■□□□□ 0.12
HDAC6-213ENST00000462730 TMEM161BQ8NDZ6 487 aa15.81■□□□□ 0.12
HDAC6-213ENST00000462730 PCIF1Q9H4Z3 704 aa15.81■□□□□ 0.12
HDAC6-213ENST00000462730 PLCB1Q9NQ66 1216 aa15.81■□□□□ 0.12
HDAC6-213ENST00000462730 KMT5AQ9NQR1 393 aa15.81■□□□□ 0.12
HDAC6-213ENST00000462730 XPNPEP1Q9NQW7 623 aa15.81■□□□□ 0.12
HDAC6-213ENST00000462730 PDGFCQ9NRA1 345 aa15.81■□□□□ 0.12
HDAC6-213ENST00000462730 ABT1Q9ULW3 272 aaKnown RBP15.81■□□□□ 0.12
HDAC6-213ENST00000462730 FAM155AB1AL88 458 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-213ENST00000462730 PON1P27169 355 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 RAPGEF1Q13905 1077 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 HSDL1Q3SXM5 330 aa15.8■□□□□ 0.12
HDAC6-213ENST00000462730 CELF3Q5SZQ8 465 aaKnown RBP15.8■□□□□ 0.12
HDAC6-213ENST00000462730 DPY19L2P1Q6NXN4 242 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms